mRNA_D-mesarthrocarpus_Contig1005.8.2 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1005.8.2 vs. uniprot
Match: A0A6H5KCD9_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCD9_9PHAE) HSP 1 Score: 208 bits (529), Expect = 1.250e-59 Identity = 100/133 (75.19%), Postives = 112/133 (84.21%), Query Frame = 1 Query: 1 SARFATLAWSEMATKQAEYPHGLIAGGMGDGTVNVWDPARLAAQHPQPQVRGKGGDETADVSSVQRHTGAVTGLHFNPHRSSSHLLASGGADSEVYIIALDRPDTPNVFVPGPAPNTAKHTAEVTKVVWNSQV 399 +ARFATLAWSEMATKQA+YP+GLIAGGMGDGTVNVWDPA+L A HPQPQV +SV RH+G VTGL FNPH+SSSHLLASGGADSEV+++ LDRPD P VFVPGP PNT++HTAEVTKV WNSQV Sbjct: 79 TARFATLAWSEMATKQADYPYGLIAGGMGDGTVNVWDPAKLVASHPQPQV-----------ASVARHSGPVTGLDFNPHKSSSHLLASGGADSEVFVMGLDRPDAPTVFVPGPKPNTSRHTAEVTKVSWNSQV 200
BLAST of mRNA_D-mesarthrocarpus_Contig1005.8.2 vs. uniprot
Match: A0A7S2XZL8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZL8_9STRA) HSP 1 Score: 186 bits (473), Expect = 1.320e-53 Identity = 87/133 (65.41%), Postives = 104/133 (78.20%), Query Frame = 1 Query: 1 SARFATLAWSEMATKQAEYPHGLIAGGMGDGTVNVWDPARLAAQHPQPQVRGKGGDETADVSSVQRHTGAVTGLHFNPHRSSSHLLASGGADSEVYIIALDRPDTPNVFVPGPAPNTAKHTAEVTKVVWNSQV 399 S+RF++LAWSEMA Q +P GL+AGGM DG VNVWDPA+L A HPQPQ+ S+V RH G+V GL FNPH SSHLLASGG+D+EVYI+ALDRP+TPNVFVP P PNT+KH+AE+T+V WNSQV Sbjct: 69 SSRFSSLAWSEMANNQGAFPLGLVAGGMTDGVVNVWDPAKLVASHPQPQI-----------STVSRHQGSVNGLQFNPHADSSHLLASGGSDNEVYIVALDRPETPNVFVPAPPPNTSKHSAEITQVAWNSQV 190
BLAST of mRNA_D-mesarthrocarpus_Contig1005.8.2 vs. uniprot
Match: D8LBR5_ECTSI (Vesicle coat complex COPII, subunit SEC31 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBR5_ECTSI) HSP 1 Score: 188 bits (477), Expect = 9.080e-53 Identity = 91/120 (75.83%), Postives = 100/120 (83.33%), Query Frame = 1 Query: 1 SARFATLAWSEMATKQAEYPHGLIAGGMGDGTVNVWDPARLAAQHPQPQVRGKGGDETADVSSVQRHTGAVTGLHFNPHRSSSHLLASGGADSEVYIIALDRPDTPNVFVPGPAPNTAKH 360 +ARFATLAWSEMATKQAEYP+GLIAGGMGDGTVNVWDPA+L A HPQPQV +SV RH+G VTGL+FNPH+SSSHLLASGGADSEV+I+ALDRPD P VFVPGP PNT H Sbjct: 79 TARFATLAWSEMATKQAEYPYGLIAGGMGDGTVNVWDPAKLVASHPQPQV-----------ASVARHSGPVTGLNFNPHKSSSHLLASGGADSEVFIMALDRPDAPTVFVPGPKPNTVSH 187
BLAST of mRNA_D-mesarthrocarpus_Contig1005.8.2 vs. uniprot
Match: A0A7S3Y0U1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0U1_HETAK) HSP 1 Score: 170 bits (431), Expect = 3.360e-49 Identity = 84/131 (64.12%), Postives = 98/131 (74.81%), Query Frame = 1 Query: 7 RFATLAWSEMATKQAEYPHGLIAGGMGDGTVNVWDPARLAAQHPQPQVRGKGGDETADVSSVQRHTGAVTGLHFNPHRSSSHLLASGGADSEVYIIALDRPDTPNVFVPGPAPNTAKHTAEVTKVVWNSQV 399 RF+++AWS+M+ K AEYP GLIAGGM DG VNVWDPA+L A HPQPQ+ S+V RH GAV L FN H SSHLLA+GGAD+EV+I+++DRPDTPNVFVP P N AKH EVTKV WNSQV Sbjct: 59 RFSSIAWSQMSNKSAEYPLGLIAGGMADGVVNVWDPAKLVANHPQPQM-----------STVHRHQGAVNDLQFNHHPESSHLLATGGADAEVFIMSMDRPDTPNVFVPAPDSN-AKHLGEVTKVAWNSQV 177
BLAST of mRNA_D-mesarthrocarpus_Contig1005.8.2 vs. uniprot
Match: A0A4D9D4C1_9STRA (WW domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4C1_9STRA) HSP 1 Score: 172 bits (437), Expect = 3.070e-47 Identity = 79/131 (60.31%), Postives = 100/131 (76.34%), Query Frame = 1 Query: 7 RFATLAWSEMATKQAEYPHGLIAGGMGDGTVNVWDPARLAAQHPQPQVRGKGGDETADVSSVQRHTGAVTGLHFNPHRSSSHLLASGGADSEVYIIALDRPDTPNVFVPGPAPNTAKHTAEVTKVVWNSQV 399 RF LAWS + K +++ G++AGG+ DGTV +WDPA+L A+HPQP++ ++VQRH G V GLHFNP +SSHLLASGGADSEV++ ALDRPD+PNVF+P PAPNT+KHTAEV+KV WN QV Sbjct: 70 RFTALAWSALHNKGSDFNLGVVAGGLADGTVAIWDPAKLVAKHPQPRI-----------AAVQRHAGPVNGLHFNPSHTSSHLLASGGADSEVFVYALDRPDSPNVFIPAPAPNTSKHTAEVSKVAWNPQV 189
BLAST of mRNA_D-mesarthrocarpus_Contig1005.8.2 vs. uniprot
Match: A0A482RVV6_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVV6_9ARCH) HSP 1 Score: 152 bits (384), Expect = 3.700e-42 Identity = 68/122 (55.74%), Postives = 91/122 (74.59%), Query Frame = 1 Query: 34 MATKQAEYPHGLIAGGMGDGTVNVWDPARLAAQHPQPQVRGKGGDETADVSSVQRHTGAVTGLHFNPHRSSSHLLASGGADSEVYIIALDRPDTPNVFVPGPAPNTAKHTAEVTKVVWNSQV 399 M+T +P+G+IAGGM DGT+NVW+PA+ + DE + + S+++H GA+ GLHFNPH+ SSHLLASGG+D EVY+++LD PDTP+VFVP P P+ AKHTA+VT+V WNSQV Sbjct: 1 MSTYSTSFPYGVIAGGMADGTINVWNPAKFSEA-----------DEESLLVSIEQHAGAIPGLHFNPHKESSHLLASGGSDGEVYVMSLDNPDTPSVFVPAPPPSAAKHTADVTRVAWNSQV 111
BLAST of mRNA_D-mesarthrocarpus_Contig1005.8.2 vs. uniprot
Match: A0A7S2R415_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R415_9STRA) HSP 1 Score: 154 bits (390), Expect = 1.010e-41 Identity = 76/134 (56.72%), Postives = 93/134 (69.40%), Query Frame = 1 Query: 1 SARFATLAWSEMATKQAEYPHGLIAGGMGDGTVNVWDPARLAAQHPQPQVRGKGGDETADVSSVQRHTGAVTGLHFNPHRSSSHLLASGGADSEVYIIALDRPDTPNV-FVPGPAPNTAKHTAEVTKVVWNSQV 399 S RF +LAWS M+ ++P GLIAGGM DG +N+WDPA+L A HP+ Q+ SS+Q H GAV G+ FNP+ +S HLLASGG D+ VYI ALDRPDTP FVP P PN AKH AEV++V WN+QV Sbjct: 68 SGRFMSLAWSAMSNYAKDFPSGLIAGGMNDGAINIWDPAKLMAAHPKAQL-----------SSLQAHQGAVNGIQFNPNPASQHLLASGGTDAAVYIHALDRPDTPKQPFVPAPEPNAAKHAAEVSRVAWNTQV 190
BLAST of mRNA_D-mesarthrocarpus_Contig1005.8.2 vs. uniprot
Match: F0YCL1_AURAN (Sec16_C domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCL1_AURAN) HSP 1 Score: 155 bits (392), Expect = 2.050e-41 Identity = 80/136 (58.82%), Postives = 95/136 (69.85%), Query Frame = 1 Query: 1 SARFATLAWSEM---ATKQAEYPHGLIAGGMGDGTVNVWDPARLAAQHPQPQVRGKGGDETADVSSVQRHTGAVTGLHFNPHRSSSHLLASGGADSEVYIIALDRPDTPNVFVPGPAPNTAKHTAEVTKVVWNSQV 399 S+RF +LAWS M A GL+AGGM DG V+VWDPA+L A HPQ A VS VQRHTGAV GL FNPH +S+HL+ASGGAD EV++ +L+RP+ P+VFVP P PN AKH AEVT+V WNSQV Sbjct: 69 SSRFVSLAWSGMKGGAGGADGLQLGLVAGGMSDGAVDVWDPAKLLAGHPQ-----------AHVSRVQRHTGAVNGLEFNPHPTSAHLVASGGADCEVFVASLERPEAPSVFVPAPPPNAAKHAAEVTRVAWNSQV 193
BLAST of mRNA_D-mesarthrocarpus_Contig1005.8.2 vs. uniprot
Match: A0A7S4EAB3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EAB3_9STRA) HSP 1 Score: 152 bits (385), Expect = 3.040e-40 Identity = 76/135 (56.30%), Postives = 95/135 (70.37%), Query Frame = 1 Query: 1 SARFATLAWSEMATKQAE--YPHGLIAGGMGDGTVNVWDPARLAAQHPQPQVRGKGGDETADVSSVQRHTGAVTGLHFNPHRSSSHLLASGGADSEVYIIALDRPDTPNVFVPGPAPNTAKHTAEVTKVVWNSQV 399 S+RF +LAWS + K + GL+AGGM DG+V+VWD A++ A HPQ A VS VQRH+G V GL FNPH +S+HLLASGGAD EV++ +L+RP+ P VFVP P PN AKH+AEVT+V WNSQV Sbjct: 66 SSRFVSLAWSALPGKASADALSLGLVAGGMSDGSVDVWDAAKMVAGHPQ-----------AHVSRVQRHSGPVNGLQFNPHSASAHLLASGGADKEVFVASLERPEAPTVFVPAPPPNAAKHSAEVTRVAWNSQV 189
BLAST of mRNA_D-mesarthrocarpus_Contig1005.8.2 vs. uniprot
Match: A0A7S2GC77_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GC77_9STRA) HSP 1 Score: 150 bits (380), Expect = 1.460e-39 Identity = 75/131 (57.25%), Postives = 90/131 (68.70%), Query Frame = 1 Query: 1 SARFATLAWSEMATKQAEYPHGLIAGGMGDGTVNVWDPARLAAQHPQPQVRGKGGDETADVSSVQRHTGAVTGLHFNPHRSSSHLLASGGADSEVYIIALDRPDTPNV-FVPGPAPNTAKHTAEVTKVVWN 390 S RF ++AWS MA++Q+++ GLIAGGM DGT+NVWDPA+L HP+ Q+ S+ Q H GAV GL FNPH S HLLASG +DS+V I LDRP+TP FVP P PNTA HTAEVT V WN Sbjct: 90 SGRFESIAWSGMASRQSDFSLGLIAGGMTDGTINVWDPAKLVTAHPESQL-----------STFQHHNGAVNGLEFNPHPQSQHLLASGSSDSKVLIHQLDRPETPKQPFVPAPEPNTANHTAEVTTVAWN 209 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1005.8.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1005.8.2 >prot_D-mesarthrocarpus_Contig1005.8.2 ID=prot_D-mesarthrocarpus_Contig1005.8.2|Name=mRNA_D-mesarthrocarpus_Contig1005.8.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=139bp SARFATLAWSEMATKQAEYPHGLIAGGMGDGTVNVWDPARLAAQHPQPQVback to top mRNA from alignment at D-mesarthrocarpus_Contig1005:22852..24645+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1005.8.2 ID=mRNA_D-mesarthrocarpus_Contig1005.8.2|Name=mRNA_D-mesarthrocarpus_Contig1005.8.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1794bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1005:22852..24645+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1005:22852..24645+ >mRNA_D-mesarthrocarpus_Contig1005.8.2 ID=mRNA_D-mesarthrocarpus_Contig1005.8.2|Name=mRNA_D-mesarthrocarpus_Contig1005.8.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=417bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1005:22852..24645+ (Discosporangium mesarthrocarpum MT17_79)back to top |