mRNA_D-mesarthrocarpus_Contig10049.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10049.2.1 vs. uniprot
Match: A0A6H5L023_9PHAE (LisH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L023_9PHAE) HSP 1 Score: 138 bits (348), Expect = 1.060e-34 Identity = 79/131 (60.31%), Postives = 94/131 (71.76%), Query Frame = 3 Query: 3 VFDLVLDYLATKGFVEAERTLRETSAKPRSPQR----SNQGSGSRLEDLLEKSHLAHSFGGGNSKRRRTHLDAMLAEAADLKDAEGTGAGGAVKEKEVP--KVSMATQITSFNPCKNDPYGASSMPIYQVT 377 V +LVLDYLATKGF EAE+TLR++ Q+ SNQ SGSRLEDLLEKSH+AHSFG +SKRRRTHLDA+L+ A+ + P +VSMAT+ITS+NPCKNDPYGASSMPIYQV+ Sbjct: 28 VLNLVLDYLATKGFTEAEQTLRQSVTASGGSQKKGRNSNQQSGSRLEDLLEKSHVAHSFGAASSKRRRTHLDAVLSGASPXXXXXXXXXXXXXXXETTPDKEVSMATKITSYNPCKNDPYGASSMPIYQVS 158
BLAST of mRNA_D-mesarthrocarpus_Contig10049.2.1 vs. uniprot
Match: A0A835Z2Q6_9STRA (Cystathionine beta-lyase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Q6_9STRA) HSP 1 Score: 114 bits (285), Expect = 5.720e-26 Identity = 69/129 (53.49%), Postives = 84/129 (65.12%), Query Frame = 3 Query: 3 VFDLVLDYLATKGFVEAERTLRE----TSAKPRSPQRSNQGSGSRLEDLLEKSHLAHSFGGGNSKRRRTHLDAMLAEAADLKDAEGTGAGGAVKEKEVPKVSMATQITSFNPCKNDPYGASSMPIYQVT 377 V +LV+DYLATKGF +AE+ LR+ +A P + SRLE LLEKSH+AH FG N KRRRT+LDA L A G A E+ ++MATQITS+NPCK+DPYGASSMPIYQV+ Sbjct: 9 VLELVIDYLATKGFTQAEQALRKERSGNAALPCQTKNFAHEPRSRLEGLLEKSHVAHMFGTAN-KRRRTNLDAALLAEEKPAAAAAVADGDAQPEETPATMTMATQITSYNPCKDDPYGASSMPIYQVS 136
BLAST of mRNA_D-mesarthrocarpus_Contig10049.2.1 vs. uniprot
Match: A0A7S2USJ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USJ2_9STRA) HSP 1 Score: 110 bits (275), Expect = 4.590e-25 Identity = 69/138 (50.00%), Postives = 89/138 (64.49%), Query Frame = 3 Query: 3 VFDLVLDYLATKGFVEAERTLRETSAK------PRSPQRSNQGSGSRLEDLLEKSHLAHSFGGG---NSKR-RRTHLDA-MLAEAADLKDAEGT--GAGGAVKEKEVPKVSMATQITSFNPCKNDPYGASSMPIYQVT 377 + DLV DYL+TKGF E E+TLRE + + S +NQ SGSRLEDLLEKS++ + G N KR RRTHLDA +L E KDAEG + G ++E K+SMAT+I ++PCK DP+GA+ MPIYQ + Sbjct: 13 ILDLVADYLSTKGFSETEKTLREEARRNNALFRTESSSSNNQRSGSRLEDLLEKSYVTEALSGSSTSNRKRARRTHLDAILLPEGGKDKDAEGAVGSSSGRGAQQEEKKLSMATKIAGYDPCKGDPHGAACMPIYQTS 150
BLAST of mRNA_D-mesarthrocarpus_Contig10049.2.1 vs. uniprot
Match: A0A836C8G0_9STRA (Cystathionine beta-lyase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8G0_9STRA) HSP 1 Score: 108 bits (270), Expect = 6.930e-24 Identity = 68/135 (50.37%), Postives = 86/135 (63.70%), Query Frame = 3 Query: 3 VFDLVLDYLATKGFVEAERTLRETSAKPRSPQRSNQGSG---------SRLEDLLEKSHLAHSFGGG-NSKRRRTHLDAMLAEAADLKDAEGTGAGGAVKEKEVPKVSMATQITSFNPCKNDPYGASSMPIYQVT 377 V +LVL+YL TKGF +AE+ LR+ + QG+G SRLE LLEKSH+AH FG +KRRRT+LDA LA + + A +E P ++MATQITS+NPCK+DPYGASSMPIYQV+ Sbjct: 9 VLELVLEYLNTKGFTQAEQALRKEQHIAAT---GRQGTGTCTFERCSRSRLEGLLEKSHVAHMFGSSVANKRRRTNLDAALAAEPSASEGDNKDASLTAAPEESP-MTMATQITSYNPCKDDPYGASSMPIYQVS 139
BLAST of mRNA_D-mesarthrocarpus_Contig10049.2.1 vs. uniprot
Match: A0A7S3Y401_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y401_HETAK) HSP 1 Score: 67.8 bits (164), Expect = 3.260e-11 Identity = 40/77 (51.95%), Postives = 49/77 (63.64%), Query Frame = 3 Query: 9 DLVLDYLATKGFVEAERTLRETSAK----PRSPQRSNQGSGSRLEDLLEKSHLAHSFGG----GNSKRRRTHLDAML 215 DL+LDYL+TKG E E+TLR + PR Q +NQ +GSRLEDLLEKS++ G KRRR HLDA+L Sbjct: 11 DLILDYLSTKGLTETEQTLRREVQRGPDVPRQEQSNNQRTGSRLEDLLEKSYVTQLASGELTAAGQKRRRAHLDALL 87
BLAST of mRNA_D-mesarthrocarpus_Contig10049.2.1 vs. uniprot
Match: A0A8K1FG54_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FG54_PYTOL) HSP 1 Score: 66.2 bits (160), Expect = 4.040e-9 Identity = 53/153 (34.64%), Postives = 77/153 (50.33%), Query Frame = 3 Query: 3 VFDLVLDYLATKGFVEAERTLRE----------TSAKPRSPQRSNQGS-GSRLEDLLEKSHLAHSFGG-----------------GNSKRRRTHLDAMLAEAADLKDAEGTGAGGAVKEKEVPKVSMATQITSFNPCKNDPYGASSMPIYQVT 377 VFDLV DYL T+ F EAERTLR T +S +S+ SRLE +LE+S++ G G +R RT+LD E+ ++KD A + E S++T++ SF CK+DP+G+++MPIYQ + Sbjct: 17 VFDLVCDYLRTRQFFEAERTLRSERERAAPAPVTQPVAKSANQSDSSLLSSRLEFMLERSYVTQLVSGEGEEEPEKIFIPRHEADGAPRRARTNLDGN--ESLEVKDVNLNEREDAADDDEF---SISTRLVSFEACKDDPHGSATMPIYQTS 164
BLAST of mRNA_D-mesarthrocarpus_Contig10049.2.1 vs. uniprot
Match: A0A2D4BE33_PYTIN (Cystathionine beta-lyase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BE33_PYTIN) HSP 1 Score: 64.3 bits (155), Expect = 1.820e-8 Identity = 57/176 (32.39%), Postives = 78/176 (44.32%), Query Frame = 3 Query: 3 VFDLVLDYLATKGFVEAERTLRETSAKPRSP-----------------QRSNQGSG-----SRLEDLLEKSHLAHSFGGGN-------------------SKRRRTHLDAMLAEAADLKDAEGTGAGGAVKEKEVPKVSMATQITSFNPCKNDPYGASSMPIYQVTFMRACLPVNF 407 VFDLV DYL T+ F EAERTLR + SP +RSN G SRLE LLE+S++ G ++ RTHLD ++ + DA A +S+AT++ +F CK+DP+G+S+MPIYQ + NF Sbjct: 32 VFDLVCDYLRTRQFFEAERTLRNERQRVASPTHATAPAASAASXAQPPRRSNNHRGEEPLASRLEFLLERSYVTQLVSGDGDAGPEKIFVPRHEIESKSPTRPTRTHLDGNE-QSLEPDDASREDA-----------LSLATRLVTFEACKDDPHGSSTMPIYQTSTFAQPSATNF 195
BLAST of mRNA_D-mesarthrocarpus_Contig10049.2.1 vs. uniprot
Match: K3XBP1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XBP1_GLOUD) HSP 1 Score: 59.3 bits (142), Expect = 9.150e-7 Identity = 51/153 (33.33%), Postives = 75/153 (49.02%), Query Frame = 3 Query: 3 VFDLVLDYLATKGFVEAERTLRE----TSAKPRSPQR------SNQGSG------SRLEDLLEKSHLAHSFGG-GNSKRRRTHLDAMLAEAADLKDAEGTGAGG-----------AVKEKEVPKVSMATQITSFNPCKNDPYGASSMPIYQVT 377 VFDLV DYL T+ F EAE+TLR K +P +NQ SRLE +LE+S++ G G + + + E A K A G G ++++ E SM+T++ SF CK+DP+G+++MPIYQ + Sbjct: 15 VFDLVCDYLRTRQFFEAEKTLRSERERVEVKAPAPSARLYSSAANQDDSELPSLASRLEFMLERSYVTQLVSGSGQDEPEKIFVPRHEIEDAP-KRARGNLDGNEALEVPDVNLNSLEDNEADDFSMSTRLVSFEACKDDPHGSATMPIYQTS 166
BLAST of mRNA_D-mesarthrocarpus_Contig10049.2.1 vs. uniprot
Match: A0A0P1ARL3_PLAHL (Cystathionine beta-lyase n=9 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1ARL3_PLAHL) HSP 1 Score: 58.9 bits (141), Expect = 1.230e-6 Identity = 50/151 (33.11%), Postives = 77/151 (50.99%), Query Frame = 3 Query: 3 VFDLVLDYLATKGFVEAERTLR---ETSAKPR--SP-QRSNQGSG---------SRLEDLLEKSHLAHSFGG-GNSKRRRTHLDAMLAEAADLKDAEGTGAGGAVKEKEVPK----------VSMATQITSFNPCKNDPYGASSMPIYQVT 377 VFDLV DYL T+ F +AERTLR E ++ PR SP +NQ SRLE +LE+S++ G G ++ + + E + A++ EV + +M+T++ SF CK+DP+G+++MPIYQ + Sbjct: 7 VFDLVCDYLRTRQFFKAERTLRSEREATSSPRVVSPVATTNQQDAQPLETPSLASRLEFMLERSYVTQVVSGTGQTEPEKIFVPRYEVETMPKRARGNLDGNEALEIDEVNRNTLEGENDDEYTMSTRLVSFEACKDDPHGSATMPIYQTS 157 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10049.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10049.2.1 >prot_D-mesarthrocarpus_Contig10049.2.1 ID=prot_D-mesarthrocarpus_Contig10049.2.1|Name=mRNA_D-mesarthrocarpus_Contig10049.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=94bp MLAEAADLKDAEGTGAGGAVKEKEVPKVSMATQITSFNPCKNDPYGASSMback to top mRNA from alignment at D-mesarthrocarpus_Contig10049:365..2145- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10049.2.1 ID=mRNA_D-mesarthrocarpus_Contig10049.2.1|Name=mRNA_D-mesarthrocarpus_Contig10049.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1781bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10049:365..2145- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10049:365..2145- >mRNA_D-mesarthrocarpus_Contig10049.2.1 ID=mRNA_D-mesarthrocarpus_Contig10049.2.1|Name=mRNA_D-mesarthrocarpus_Contig10049.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=282bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10049:365..2145- (Discosporangium mesarthrocarpum MT17_79)back to top |