mRNA_D-mesarthrocarpus_Contig10048.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10048.3.1 vs. uniprot
Match: A0A2H4UW24_9VIRU (RING-finger domain-containing protein n=1 Tax=Bodo saltans virus TaxID=2024608 RepID=A0A2H4UW24_9VIRU) HSP 1 Score: 55.8 bits (133), Expect = 1.680e-5 Identity = 32/95 (33.68%), Postives = 42/95 (44.21%), Query Frame = 1 Query: 343 CRVCHHY-------------DRFAVRFMKCKTCLVSQRAGSSCQNPDCYSFGQEHWYYCDKCHLWEDAQKEIXXXXXXKICRAGDRNKFRHCDRC 588
CR CH + DRF V+ M CK C Q +C C + Y+CDKC + +D KE KICR G ++ + HCD C
Sbjct: 35 CRQCHDFYEYETNIINSHKMDRFNVKKMICKMCDFEQPLSKNCVK--CGMIMGK--YFCDKCCIIDDNDKEYYHCDKCKICRCGKKDDYIHCDTC 125 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10048.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10048.3.1 >prot_D-mesarthrocarpus_Contig10048.3.1 ID=prot_D-mesarthrocarpus_Contig10048.3.1|Name=mRNA_D-mesarthrocarpus_Contig10048.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=116bp MPLHRINPTQHYQRKVWVHPPGIKSSPGGFVACRVCHHYDRFAVRFMKCKback to top mRNA from alignment at D-mesarthrocarpus_Contig10048:3393..4542+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10048.3.1 ID=mRNA_D-mesarthrocarpus_Contig10048.3.1|Name=mRNA_D-mesarthrocarpus_Contig10048.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1150bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10048:3393..4542+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10048:3393..4542+ >mRNA_D-mesarthrocarpus_Contig10048.3.1 ID=mRNA_D-mesarthrocarpus_Contig10048.3.1|Name=mRNA_D-mesarthrocarpus_Contig10048.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=348bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10048:3393..4542+ (Discosporangium mesarthrocarpum MT17_79)back to top |