mRNA_D-mesarthrocarpus_Contig10047.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10047.1.1 vs. uniprot
Match: A0A6H5JZN0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZN0_9PHAE) HSP 1 Score: 107 bits (267), Expect = 7.860e-24 Identity = 56/96 (58.33%), Postives = 68/96 (70.83%), Query Frame = 1 Query: 22 EALSEEFGLFIWPSGIALACLVWSLRARMREGVGVIEIGAGTSLPGLLAAKAGALGAHVTLTDREDSSAILDNICGAIEANGLKWPSPPRCRPGAG 309 E LSE+FGLF WPSG+ LACL+W+ R R +G V+EIGAGT+LPGLLAAK LGA V LTDRE++ +LDN+ GA+ ANGL P P G Sbjct: 291 EVLSEDFGLFTWPSGVVLACLIWA-RRREFDGASVVEIGAGTALPGLLAAK---LGASVVLTDREEAPWVLDNMRGAVAANGLNLGPPDDASPAIG 382
BLAST of mRNA_D-mesarthrocarpus_Contig10047.1.1 vs. uniprot
Match: I1HWH7_BRADI (Uncharacterized protein n=4 Tax=Brachypodium distachyon TaxID=15368 RepID=I1HWH7_BRADI) HSP 1 Score: 88.6 bits (218), Expect = 2.370e-18 Identity = 49/98 (50.00%), Postives = 65/98 (66.33%), Query Frame = 1 Query: 4 VRVVIHEALSEEFGLFIWPSGIALACLVWSLRARMREGVGVIEIGAGTSLPGLLAAKAGALGAHVTLTDREDSSAILDNI---CGAIEAN----GLKW 276 +RV I E + E++G+F+WP + LA VW R R G V+E+GAGTSLPGL+AAK +GA+VTLTD D++ +LDNI CG +AN GL W Sbjct: 42 LRVDILENMQEDYGMFVWPCSVILAEYVWQQRPRF-SGSAVVELGAGTSLPGLVAAK---VGANVTLTDIADNTEVLDNIRQICGVNDANCNVLGLTW 135
BLAST of mRNA_D-mesarthrocarpus_Contig10047.1.1 vs. uniprot
Match: A0A2J6L7G2_LACSA (Uncharacterized protein n=3 Tax=Lactuca TaxID=4235 RepID=A0A2J6L7G2_LACSA) HSP 1 Score: 87.4 bits (215), Expect = 3.710e-18 Identity = 44/91 (48.35%), Postives = 61/91 (67.03%), Query Frame = 1 Query: 1 AVRVVIHEALSEEFGLFIWPSGIALACLVWSLRARMREGVGVIEIGAGTSLPGLLAAKAGALGAHVTLTDREDSSAILDNICGAIEANGLK 273 AV + I E++ E++GLF+WP + LA VW R+R G+ V+E+GAGTSLPGL+AAK +GAHV LTD + +LDN+ E N +K Sbjct: 18 AVSITIIESMKEDYGLFVWPCSVILAEYVWQQRSRF-TGIRVVELGAGTSLPGLIAAK---VGAHVILTDDSNRLEVLDNMRRVCELNNVK 104
BLAST of mRNA_D-mesarthrocarpus_Contig10047.1.1 vs. uniprot
Match: A0A251S4E0_HELAN (Putative methyltransferase family protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251S4E0_HELAN) HSP 1 Score: 87.8 bits (216), Expect = 4.320e-18 Identity = 44/91 (48.35%), Postives = 61/91 (67.03%), Query Frame = 1 Query: 1 AVRVVIHEALSEEFGLFIWPSGIALACLVWSLRARMREGVGVIEIGAGTSLPGLLAAKAGALGAHVTLTDREDSSAILDNICGAIEANGLK 273 A+ + + E++ E++GLF+WP I LA VW R+R +GV V+E+GAGTSLPGL+AAK +GA V LTD D +LDN+ E N +K Sbjct: 37 AISITVIESMKEDYGLFVWPCSIILAEYVWQQRSRF-QGVSVVELGAGTSLPGLVAAK---VGADVVLTDDSDRLEVLDNMRRVSELNNIK 123
BLAST of mRNA_D-mesarthrocarpus_Contig10047.1.1 vs. uniprot
Match: D7FU39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU39_ECTSI) HSP 1 Score: 89.4 bits (220), Expect = 1.520e-17 Identity = 42/58 (72.41%), Postives = 49/58 (84.48%), Query Frame = 1 Query: 1 AVRVVIHEALSEEFGLFIWPSGIALACLVWSLRARMREGVGVIEIGAGTSLPGLLAAK 174 AVRVV+HE LSE+FGLF WPSG+ LACLVW+ R R +G V+EIGAGT+LPGLLAAK Sbjct: 286 AVRVVVHEVLSEDFGLFTWPSGVVLACLVWA-RRREFDGASVVEIGAGTALPGLLAAK 342
BLAST of mRNA_D-mesarthrocarpus_Contig10047.1.1 vs. uniprot
Match: A0A2G5C934_AQUCA (Uncharacterized protein n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5C934_AQUCA) HSP 1 Score: 85.5 bits (210), Expect = 2.410e-17 Identity = 47/99 (47.47%), Postives = 59/99 (59.60%), Query Frame = 1 Query: 1 AVRVVIHEALSEEFGLFIWPSGIALACLVWSLRARMREGVGVIEIGAGTSLPGLLAAKAGALGAHVTLTDREDSSAILDNICGAIEAN-------GLKW 276 A + I E + EE+G+F+WP IALA VW R R GV V+E+GAGTSLPGL+AAK LG++VTLTD +L N+ E N GL W Sbjct: 21 AFTIEIIENMEEEYGMFVWPCSIALAEYVWQQRLRFSGGVSVVELGAGTSLPGLVAAK---LGSYVTLTDNSTRLEVLANMKRMCELNKINCQVLGLTW 116
BLAST of mRNA_D-mesarthrocarpus_Contig10047.1.1 vs. uniprot
Match: UPI000F61184F (methyltransferase-like protein 23 isoform X2 n=2 Tax=Coffea eugenioides TaxID=49369 RepID=UPI000F61184F) HSP 1 Score: 84.3 bits (207), Expect = 2.510e-17 Identity = 48/99 (48.48%), Postives = 60/99 (60.61%), Query Frame = 1 Query: 1 AVRVVIHEALSEEFGLFIWPSGIALACLVWSLRARMREGVGVIEIGAGTSLPGLLAAKAGALGAHVTLTDREDSSAILDNICGAIEAN-------GLKW 276 A V I E++ EE+GLF+WP I LA VW R+R G VIE+GAGTSLPG++AAK +GA VTLTD + +LDN+ E N GL W Sbjct: 35 AFSVTIIESMKEEYGLFVWPCSIILAEYVWQQRSRF-SGANVIELGAGTSLPGIVAAK---VGADVTLTDDSNRPEVLDNMRRECELNNVTCKVLGLTW 129
BLAST of mRNA_D-mesarthrocarpus_Contig10047.1.1 vs. uniprot
Match: A0A2U1QHL3_ARTAN (Uncharacterized protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1QHL3_ARTAN) HSP 1 Score: 87.4 bits (215), Expect = 4.580e-17 Identity = 45/90 (50.00%), Postives = 60/90 (66.67%), Query Frame = 1 Query: 4 VRVVIHEALSEEFGLFIWPSGIALACLVWSLRARMREGVGVIEIGAGTSLPGLLAAKAGALGAHVTLTDREDSSAILDNICGAIEANGLK 273 + + I E++ EE+GLF+WP + LA VW R R GV V+E+GAGTSLPGL+AAK +GA+V LTD D S +LDN+ E N +K Sbjct: 38 ISITIIESMKEEYGLFVWPCSLILAEYVWQHRVRF-AGVNVLELGAGTSLPGLVAAK---VGANVVLTDDADRSEVLDNMRRVCELNNVK 123
BLAST of mRNA_D-mesarthrocarpus_Contig10047.1.1 vs. uniprot
Match: A0A6P4AUG1_ZIZJJ (methyltransferase-like protein 23 isoform X2 n=3 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P4AUG1_ZIZJJ) HSP 1 Score: 84.0 bits (206), Expect = 4.930e-17 Identity = 46/99 (46.46%), Postives = 59/99 (59.60%), Query Frame = 1 Query: 1 AVRVVIHEALSEEFGLFIWPSGIALACLVWSLRARMREGVGVIEIGAGTSLPGLLAAKAGALGAHVTLTDREDSSAILDNICGAIEAN-------GLKW 276 A+ + + E + EE+GLF+WP I LA VW R R G V+E+GAGTSLPGL+AAK +GAHVTLTD + +LDN+ N GL W Sbjct: 31 AISISVIENMKEEYGLFVWPCSIVLAEYVWQQRLRF-SGATVVELGAGTSLPGLVAAK---VGAHVTLTDDANKLEVLDNMRRVCHLNKLHCNILGLTW 125
BLAST of mRNA_D-mesarthrocarpus_Contig10047.1.1 vs. uniprot
Match: A0A7C9E5C2_OPUST (Uncharacterized protein (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9E5C2_OPUST) HSP 1 Score: 81.6 bits (200), Expect = 5.030e-17 Identity = 44/88 (50.00%), Postives = 58/88 (65.91%), Query Frame = 1 Query: 10 VVIHEALSEEFGLFIWPSGIALACLVWSLRARMREGVGVIEIGAGTSLPGLLAAKAGALGAHVTLTDREDSSAILDNICGAIEANGLK 273 + I E + EE+GLF+WPS IALA VW R+R G V+E+GAGTSLPGL+A+K +GA VTLTD + +L NI + N L+ Sbjct: 3 IQIIENMKEEYGLFVWPSSIALAEYVWQQRSRF-SGTSVVELGAGTSLPGLVASK---VGAEVTLTDDSNRVEVLGNIRKVCDLNKLQ 86 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10047.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10047.1.1 >prot_D-mesarthrocarpus_Contig10047.1.1 ID=prot_D-mesarthrocarpus_Contig10047.1.1|Name=mRNA_D-mesarthrocarpus_Contig10047.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=174bp AVRVVIHEALSEEFGLFIWPSGIALACLVWSLRARMREGVGVIEIGAGTSback to top mRNA from alignment at D-mesarthrocarpus_Contig10047:215..1300- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10047.1.1 ID=mRNA_D-mesarthrocarpus_Contig10047.1.1|Name=mRNA_D-mesarthrocarpus_Contig10047.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1086bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10047:215..1300- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10047:215..1300- >mRNA_D-mesarthrocarpus_Contig10047.1.1 ID=mRNA_D-mesarthrocarpus_Contig10047.1.1|Name=mRNA_D-mesarthrocarpus_Contig10047.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=522bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10047:215..1300- (Discosporangium mesarthrocarpum MT17_79)back to top |