mRNA_D-mesarthrocarpus_Contig10040.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10040.2.1 vs. uniprot
Match: D8LBS8_ECTSI (HECT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBS8_ECTSI) HSP 1 Score: 270 bits (690), Expect = 3.460e-80 Identity = 137/202 (67.82%), Postives = 155/202 (76.73%), Query Frame = 1 Query: 1 LFSVSDLPRLYLLPGKILCSLAKACEGGE-RGEVDGLPLEDYLELSSLAMADPLTGAPLVEGGGDMDVTPANVHQFVEAVTERWLSTGLMPLAEAFRAGCSEVFPVHMLRAFLPHELQKQLCGEEPLDWTEGQLEEAVVPGAGYTRNSQPFRMFLRCLSEMSAATKHQFLLFVLGCPHLPPGGLIALTPPLEVSGVGGEHGA 603 L SV DLPRLY PG I+ +L KAC+G + GEV+G+PL D+LELSSLAM DP++GA LV GG D+DVT NV +FVEAVT RWL G +P AEAFRAGC+EVFPVHMLR+ EL QLCGEE L+W+ L+EAVVPGAGYTRNSQPF FL CLSEMS A K FLLFVLGCPHLPPGGL L+PPLEVS G GA Sbjct: 1647 LLSVGDLPRLYNRPGAIIRNLFKACKGDKPTGEVEGMPLADFLELSSLAMTDPVSGAALVPGGEDVDVTLDNVGEFVEAVTSRWLHAGTLPQAEAFRAGCAEVFPVHMLRSLSAQELHDQLCGEEALEWSLEHLKEAVVPGAGYTRNSQPFCDFLACLSEMSPAKKRSFLLFVLGCPHLPPGGLCGLSPPLEVSRKQGAGGA 1848
BLAST of mRNA_D-mesarthrocarpus_Contig10040.2.1 vs. uniprot
Match: A0A836CNJ7_9STRA (HECT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNJ7_9STRA) HSP 1 Score: 206 bits (525), Expect = 9.320e-60 Identity = 108/209 (51.67%), Postives = 130/209 (62.20%), Query Frame = 1 Query: 16 DLPRLYLLPGKILCSLAKACEGGERGE------------------VDGLPLEDYLELSSLAMADPLTGAPLVEGGGDMD---VTPANVHQFVEAVTERWLSTGLMPLAEAFRAGCSEVFPVHMLRAFLPHELQKQLCGEEPLDWTEGQLEEAVVPGAGYTRNSQPFRMFLRCLSEMSAATKHQFLLFVLGCPHLPPGGLIALTPPLEVS 579 DLPR+Y PG +L L++A E +DG+PL D+LE + L+M DPL+G L G + VTPANVH FV + +WL G++P A+AF AGC+E FP LRAF EL+ QLCG+EPLDW LE V PGAGYTRNS+PFR L CLS+M TK +FLLFVLGCP LPPGGL LTPPLEVS Sbjct: 372 DLPRVYAEPGAVLLRLSRALHTTSTPETXXXXXXXXADAATAAAQLDGMPLSDWLEAACLSMVDPLSGERLACAAGPGEAPAVTPANVHHFVGELLLKWLGYGVVPQAQAFVAGCAEAFPARKLRAFSAAELRDQLCGQEPLDWPLEYLEAVVSPGAGYTRNSEPFRALLHCLSDMDLPTKRRFLLFVLGCPRLPPGGLGGLTPPLEVS 580
BLAST of mRNA_D-mesarthrocarpus_Contig10040.2.1 vs. uniprot
Match: A0A1W0AC54_9STRA (HECT E3 ubiquitin ligase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AC54_9STRA) HSP 1 Score: 133 bits (335), Expect = 4.600e-33 Identity = 72/196 (36.73%), Postives = 109/196 (55.61%), Query Frame = 1 Query: 10 VSDLPRLYLLPGKILCSLAKACEGGE-----RGEVDGLPLEDYLELSSLAMADPLTGAPLVEGGGDMDVTPANVHQFVEAVTERWLSTGLMPLAEAFRAGCSEVFPVHMLRAFLPHELQKQLCGEEPLDWTEGQLEEAVVPGAGYTRNSQPFRMFLRCLSEMSAATKHQFLLFVLGCPHLPPGGL--IALTPPLEV 576 V+D+PR++L PG+I+ SL A E + + ++ +P+ ++LE L+ DP T LV G + VT N+ ++V V E WL G+ P AFR G SEV + L+ ELQ LCG ++W+ L+ ++ GYT +S+P F+ L ++ A + FLL+ GCP+LPPGG+ L PP EV Sbjct: 115 VTDIPRIFLEPGRIVLSLYNAAEQLKVKPCHKVFIEKIPVAEWLEQVDLSFVDPCTQTELVANGEVLSVTMENLAEYVSRVLEIWLGHGIAPQIYAFREGLSEVVAIDKLKLLEADELQAILCGSADVEWSYESLKNSIKLAHGYTVSSEPVEHFINTLVNLTTAQRRAFLLYSTGCPNLPPGGVGFEKLKPPFEV 310
BLAST of mRNA_D-mesarthrocarpus_Contig10040.2.1 vs. uniprot
Match: A0A1V9YM15_9STRA (HECT E3 ubiquitin ligase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YM15_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.080e-31 Identity = 72/196 (36.73%), Postives = 105/196 (53.57%), Query Frame = 1 Query: 10 VSDLPRLYLLPGKILCSLAKACEG-----GERGEVDGLPLEDYLELSSLAMADPLTGAPLVEGGGDMDVTPANVHQFVEAVTERWLSTGLMPLAEAFRAGCSEVFPVHMLRAFLPHELQKQLCGEEPLDWTEGQLEEAVVPGAGYTRNSQPFRMFLRCLSEMSAATKHQFLLFVLGCPHLPPGG--LIALTPPLEV 576 V+DLP ++L PG+ + +L KA E ++ P+ +LE L+ DP T A LV+ G + VT N+ +V+AV ++WL G+ AFR G ++V P+ L+ E+Q LCG ++WTE L + + GYT S P F++ L MS + FLL+ GCP+LPPGG L L P EV Sbjct: 1801 VTDLPTIFLEPGRTMLALYKAAEALKTTPAAAVTMENTPIAAWLEAVDLSFVDPCTQAELVDDGEAVSVTVDNLGAYVDAVLDQWLVHGIQSQVTAFREGLADVVPMAKLQLLEVGEIQATLCGTVDVEWTEEALRQTIKIAHGYTAASAPVAYFIQTLVAMSTTQRRAFLLYATGCPNLPPGGVGLEKLKPTFEV 1996
BLAST of mRNA_D-mesarthrocarpus_Contig10040.2.1 vs. uniprot
Match: A0A835WN37_9CHLO (HECT-type E3 ubiquitin transferase n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WN37_9CHLO) HSP 1 Score: 119 bits (297), Expect = 2.090e-27 Identity = 78/188 (41.49%), Postives = 103/188 (54.79%), Query Frame = 1 Query: 22 PRLYLLPGKILCSLAKACEGGERGE--VDGLPLEDYLELSSLAMADPLTGAPLVEGGGDMDV-TPANVHQFVEAVTERWLSTGLMPLAEAFRAGCSEVFPVHMLRAFLPHELQKQLCGEEPLDWTEGQLEEAVVPGAGYTRNSQPFRMFLRCLSEMSAATKHQFLLFVLGCPHLPPGGLIALTPPLEV 576 P L ++ +LA GG G VDG+PLED L ++ + P PL GGG++ V TPA + +++ AVT+ L +G+ AFR G +EVF + + F E++ LCG WT L EA+ GYT NSQP + L LSE+ AA + FL FV GCP LPPGGL AL P L V Sbjct: 1702 PGLGATLARLHAALAAHRAGGGAGPLLVDGVPLED-LCITFVLPGQP--DYPLRPGGGEVVVSTPAQLAEYIGAVTDATLGSGIAAQMGAFREGFNEVFSLSTVSIFNEDEIEVLLCGSGER-WTLQALSEAIKFDHGYTANSQPVKYLLEILSELDAADQRAFLRFVTGCPRLPPGGLTALQPRLTV 1885
BLAST of mRNA_D-mesarthrocarpus_Contig10040.2.1 vs. uniprot
Match: A8I5Z4_CHLRE (Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8I5Z4_CHLRE) HSP 1 Score: 114 bits (286), Expect = 2.830e-26 Identity = 71/161 (44.10%), Postives = 92/161 (57.14%), Query Frame = 1 Query: 97 VDGLPLEDYLELSSLAMADPLTGAPLVEGGGDMDVTPAN-VHQFVEAVTERWLSTGLMPLAEAFRAGCSEVFPVHMLRAFLPHELQKQLCGEEPLDWTEGQLEEAVVPGAGYTRNSQPFRMFLRCLSEMSAATKHQFLLFVLGCPHLPPGGLIALTPPLEV 576 VDG+PLED L ++ + P PL GGGDM V+ A + +++ AVT+ L +G+ AFR G +EVF + L F E++ LCG WT L EA+ GYT NSQP + L +SE+ AA + FL FV GCP LPPGGL AL P L V Sbjct: 288 VDGVPLED-LCITFVLPGQP--DYPLRPGGGDMVVSTAEQLAEYMAAVTDATLGSGVAAQMGAFREGFNEVFSLSTLSIFNEDEIEVLLCGSGER-WTLQALSEAIKFDHGYTANSQPVKYLLEIMSELDAADQRAFLRFVTGCPRLPPGGLTALQPRLTV 444
BLAST of mRNA_D-mesarthrocarpus_Contig10040.2.1 vs. uniprot
Match: A0A2K3DIG8_CHLRE (HECT-type E3 ubiquitin transferase n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3DIG8_CHLRE) HSP 1 Score: 114 bits (286), Expect = 6.220e-26 Identity = 71/161 (44.10%), Postives = 92/161 (57.14%), Query Frame = 1 Query: 97 VDGLPLEDYLELSSLAMADPLTGAPLVEGGGDMDVTPAN-VHQFVEAVTERWLSTGLMPLAEAFRAGCSEVFPVHMLRAFLPHELQKQLCGEEPLDWTEGQLEEAVVPGAGYTRNSQPFRMFLRCLSEMSAATKHQFLLFVLGCPHLPPGGLIALTPPLEV 576 VDG+PLED L ++ + P PL GGGDM V+ A + +++ AVT+ L +G+ AFR G +EVF + L F E++ LCG WT L EA+ GYT NSQP + L +SE+ AA + FL FV GCP LPPGGL AL P L V Sbjct: 1875 VDGVPLED-LCITFVLPGQP--DYPLRPGGGDMVVSTAEQLAEYMAAVTDATLGSGVAAQMGAFREGFNEVFSLSTLSIFNEDEIEVLLCGSGER-WTLQALSEAIKFDHGYTANSQPVKYLLEIMSELDAADQRAFLRFVTGCPRLPPGGLTALQPRLTV 2031
BLAST of mRNA_D-mesarthrocarpus_Contig10040.2.1 vs. uniprot
Match: A0A8J4BIE3_9CHLO (HECT domain-containing protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4BIE3_9CHLO) HSP 1 Score: 112 bits (279), Expect = 4.790e-25 Identity = 76/191 (39.79%), Postives = 99/191 (51.83%), Query Frame = 1 Query: 22 PRLYLLPGKILCSLAKACEGGERGE--VDGLPLEDYLELSSLAMADPLTGAP---LVEGGGDMDV-TPANVHQFVEAVTERWLSTGLMPLAEAFRAGCSEVFPVHMLRAFLPHELQKQLCGEEPLDWTEGQLEEAVVPGAGYTRNSQPFRMFLRCLSEMSAATKHQFLLFVLGCPHLPPGGLIALTPPLEV 576 P L K+ +LA GG G+ +DG+ +ED L + L G P L GG D+ V T + +++ AV + + +G+M AFR G +EVF + ML F E++ LCG WT L EA+ GYT NS P R L LSE+ AA + FL FV GCP LPPGGL AL P L V Sbjct: 562 PGLGTTLAKLHSALAAYRAGGSSGKLLIDGVAVED------LCITFVLPGQPDYLLRPGGADVVVETAEQLEEYIGAVVDASMGSGIMAQMTAFREGFNEVFNLSMLSLFHEDEIEVLLCGSGER-WTLQVLAEAIKFDHGYTANSPPVRFLLEILSELDAAEQRAFLRFVTGCPRLPPGGLTALQPRLTV 745
BLAST of mRNA_D-mesarthrocarpus_Contig10040.2.1 vs. uniprot
Match: A0A7R9YRF5_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9YRF5_9CHLO) HSP 1 Score: 108 bits (271), Expect = 4.790e-24 Identity = 64/159 (40.25%), Postives = 87/159 (54.72%), Query Frame = 1 Query: 100 DGLPLEDYLELSSLAMADPLTGAPLVEGGGDMDVTPANVHQFVEAVTERWLSTGLMPLAEAFRAGCSEVFPVHMLRAFLPHELQKQLCGEEPLDWTEGQLEEAVVPGAGYTRNSQPFRMFLRCLSEMSAATKHQFLLFVLGCPHLPPGGLIALTPPLEV 576 DG+PL D + +L D + LV GG +DV AN+ Q+++AV + L +G+ AFRAG EVFP+ L F EL+ LCG WT L +++ GYT +S + FL LSE+ + +FL FV GCP LP GG+ AL P L V Sbjct: 376 DGVPLSDLCLVFTLP-GD--SAYELVPGGAGVDVCDANLTQYIDAVLDATLGSGVAAQLAAFRAGFDEVFPLASLECFYEDELETLLCGSGER-WTVQVLADSIKFDHGYTASSPVVKCFLELLSELDTLEQRRFLRFVTGCPRLPTGGIAALLPRLTV 530
BLAST of mRNA_D-mesarthrocarpus_Contig10040.2.1 vs. uniprot
Match: A0A150GDB5_GONPE (HECT-type E3 ubiquitin transferase n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GDB5_GONPE) HSP 1 Score: 108 bits (271), Expect = 6.260e-24 Identity = 67/157 (42.68%), Postives = 86/157 (54.78%), Query Frame = 1 Query: 118 DYLELSSLAMADPLTGAP---LVEGGGDMDVTPAN-VHQFVEAVTERWLSTGLMPLAEAFRAGCSEVFPVHMLRAFLPHELQKQLCGEEPLDWTEGQLEEAVVPGAGYTRNSQPFRMFLRCLSEMSAATKHQFLLFVLGCPHLPPGGLIALTPPLEV 576 D + L L + L G P L EGG DM V+ A +++++EAV + L +G+ AFR G +EVF + L F E++ LCG WT L EA+ GYT +SQP R L LSE+ A + FL FV GCP LPPGGL AL P L V Sbjct: 1620 DDVALEDLCITFVLPGQPDYPLREGGADMVVSTAEQLNEYIEAVVDATLRSGVAAQLAAFREGFNEVFSLSTLSLFHEDEIEVLLCGSGER-WTMQVLSEAIKFDHGYTASSQPVRFLLEILSELDTADQRAFLRFVTGCPRLPPGGLPALHPRLTV 1775 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10040.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10040.2.1 >prot_D-mesarthrocarpus_Contig10040.2.1 ID=prot_D-mesarthrocarpus_Contig10040.2.1|Name=mRNA_D-mesarthrocarpus_Contig10040.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=202bp LFSVSDLPRLYLLPGKILCSLAKACEGGERGEVDGLPLEDYLELSSLAMAback to top mRNA from alignment at D-mesarthrocarpus_Contig10040:1847..4301- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10040.2.1 ID=mRNA_D-mesarthrocarpus_Contig10040.2.1|Name=mRNA_D-mesarthrocarpus_Contig10040.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2455bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10040:1847..4301- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10040:1847..4301- >mRNA_D-mesarthrocarpus_Contig10040.2.1 ID=mRNA_D-mesarthrocarpus_Contig10040.2.1|Name=mRNA_D-mesarthrocarpus_Contig10040.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=606bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10040:1847..4301- (Discosporangium mesarthrocarpum MT17_79)back to top |