mRNA_D-mesarthrocarpus_Contig1004.6.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1004.6.1 vs. uniprot
Match: A0A485KCR1_9STRA (Aste57867_2222 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KCR1_9STRA) HSP 1 Score: 107 bits (267), Expect = 1.880e-22 Identity = 74/218 (33.94%), Postives = 108/218 (49.54%), Query Frame = 1 Query: 478 DGFITKSMFLAAVAWPWKICNGAWFDGKIGIWPVADFVLVARVTPITGRREHR------S*PATVNGERHKELMIEEVIPVLKASIPGHR------------PHDLRAARWCKATHVEGDHGDNPGCCGRHITLETQPINSPDPNANGLGFFHPIQQLK--------EDVGVTTGEELEEITMGETLE*AWQRLFAVYGADMGCKGDNSYRLPHLGKE 1053 + FITK MFLAAVA P+ +FDGK+G+WP FV +V P R++R + P V GE ++E+++ +VIP +KA++PG R PH ++ K+ V G + + QP NSPD N LGFFH IQ L+ E++ GE L E + ETL + L V + +G N ++LPH+ K+ Sbjct: 83 NSFITKVMFLAAVARPYDYRTRKFFDGKLGVWP---FV---KVEPAEQSRKNRPRGTLITSPQNVTGEVYREMILRKVIPSIKANLPGARSREIVLQQDNAGPHSQMTTQFLKSQGVRG------------VVVAPQPPNSPDFNVLDLGFFHSIQSLQHHKRTRNIEELVGAVGEALFEFPV-ETLSKTFITLQKVMETSISIRGGNEFKLPHMKKD 281
BLAST of mRNA_D-mesarthrocarpus_Contig1004.6.1 vs. uniprot
Match: W4FWJ6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FWJ6_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 9.290e-19 Identity = 79/236 (33.47%), Postives = 105/236 (44.49%), Query Frame = 1 Query: 406 HAGQDWRLPTPRR--------EIPNPRGRRTKDGFITKSMFLAAVAWP-WKICNGAWFDGKIGIWPVADFVLVARVTPI--TGRREHRS*PATVNGERHKELMIEEVIPVLKASIPGHRPHDLRAARWCKATHVEGDHGDNPGCC---GRHITLETQPINSPDPNANGLGFFHPIQQLKEDVGVTTGEELEEITMGE-------TLE*AWQRLFAVYGADMGCKGDNSYRLPHLGK 1050 H + W TP R E P R ++K FITK MFL+AVA P W WFDGKIG W V AR + G E R P V +K+++I+ VIP +KA P + + HV D C G + L+ QP NSPD N LGFF IQ L++ T E++ T +LE + L + +GC G NSY++ H+ K Sbjct: 6 HVDEKWFHATPIRSRFYLLPGEEPPHRSTQSKR-FITKVMFLSAVARPLWDNAKSEWFDGKIGTWHFTQHVRAARSSRNRPAGTMELR--PVNVTRPVYKKMLIDNVIPAIKALWPADCSKTVFIQQDNARLHVPPSDADIIKACTSDGWAMKLKYQPPNSPDMNVLDLGFFRAIQALQQTHHSNTYEDIVNATNNAWKDVDPWSLERNFLTLQSCLREVIGCAGGNSYKISHMKK 238
BLAST of mRNA_D-mesarthrocarpus_Contig1004.6.1 vs. uniprot
Match: A0A485KGK4_9STRA (Aste57867_5319 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KGK4_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 2.690e-18 Identity = 68/206 (33.01%), Postives = 105/206 (50.97%), Query Frame = 1 Query: 484 FITKSMFLAAVAWPWKICN-GAWFDGKIGIWPVADFVLVARVTPITGRREHRS*PATVNGERHKELMIEEVIPVLKASIP-GHRPH------DLRAARWCKATHVEGDHGDNPGCCGRHITLETQPINSPDPNANGLGFFHPIQQLKEDVGVTTGEEL-EEITMG------ETLE*AWQRLFAVYGADMGCKGDNSYRLPHLGKEK 1056 FITK MFLAAVA P + FDGKIG+WP + + R + + + P +V+G +K ++I +V+P ++A P G++P+ D C T HG + I++ QP NSPD N LGFF+ IQ L++ + ++L + +T+ E+L + L +V M G N+Y+LPHL K+K Sbjct: 86 FITKVMFLAAVARPRHDTHRNCAFDGKIGMWPFVEQSIAKRTSKNRPKGSIETKPLSVDGVVYKSMIINKVVPAIQAKFPVGNQPNGVFIQQDNAGPHTCVTTKFLRAHGVSG------ISMTCQPANSPDFNVLDLGFFNAIQNLQQKKPSRSIDQLIDAVTLAFDEMPIESLAKTFITLQSVMEKAMEVNGGNNYKLPHLHKDK 285
BLAST of mRNA_D-mesarthrocarpus_Contig1004.6.1 vs. uniprot
Match: W4FGU6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FGU6_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 4.930e-18 Identity = 72/202 (35.64%), Postives = 93/202 (46.04%), Query Frame = 1 Query: 484 FITKSMFLAAVAWP-WKICNGAWFDGKIGIWPVADFVLVARVTPI--TGRREHRS*PATVNGERHKELMIEEVIPVLKASIPGHRPHDLRAARWCKATHVEGDHGDNPGCC---GRHITLETQPINSPDPNANGLGFFHPIQQLKEDVGVTTGEELEEITMGE-------TLE*AWQRLFAVYGADMGCKGDNSYRLPHLGK 1050 FITK MFL+AVA P W WFDGKIG W V AR + G E R P V HK+++I+ VIP +KA P + + HV D C G + L+ QP NSPD N LGFF IQ L++ T E + T +LE + L + +GC G NSY++PH+ K Sbjct: 144 FITKVMFLSAVARPRWDNAKSEWFDGKIGTWHFTQHVRAARSSRNRPAGTMELR--PVNVTRPVHKKMLIDNVIPAIKALWPADCSKTVFIQQDNARPHVPPSDADIVKACTSDGWAMKLKYQPPNSPDMNILDLGFFRAIQALQQTHHSNTYEGIVNATNNAWKDVDPWSLERNFLTLQSCLREVIGCAGGNSYKIPHMKK 343
BLAST of mRNA_D-mesarthrocarpus_Contig1004.6.1 vs. uniprot
Match: A0A6A4Z6G2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z6G2_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 8.250e-18 Identity = 67/205 (32.68%), Postives = 96/205 (46.83%), Query Frame = 1 Query: 484 FITKSMFLAAVAWP-WKICNGAWFDGKIGIWPVADFVLVARVTPITGRREHRS*PATVNGERHKELMIEEVIPVLKASIPG----HRPHDLRAARWCKATHVEGDHGDNPGCCGRHITLETQPINSPDPNANGLGFFHPIQQLKED-VGVTTGE----------ELEEITMGETLE*AWQRLFAVYGADMGCKGDNSYRLPHLGK 1050 FITK MFLAAVA P + FDGKIGIWP + V R + + +VN + ++++++ EV+P ++ +P D + C T + HG + I + QP NSPD N LGFF+ IQ L++ V + GE EL +G+T L V MGC G N+Y +PH+ K Sbjct: 11 FITKVMFLAAVARPRYDAHKKQMFDGKIGIWPFVEEVAAVRSSKNRPKGTLELTTQSVNADVYQDMVMNEVVPAIQVKMPRGVVVKLQQDNASPHRCVTTELIARHGVDS------IEVANQPPNSPDFNVLDLGFFNSIQSLQQQKVARSIGELIAAVEEAFYELPVTILGKTFI----TLQKVMELSMGCSGGNTYTMPHMSK 205
BLAST of mRNA_D-mesarthrocarpus_Contig1004.6.1 vs. uniprot
Match: A0A485KCF4_9STRA (Aste57867_2720 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KCF4_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 1.310e-17 Identity = 68/206 (33.01%), Postives = 105/206 (50.97%), Query Frame = 1 Query: 484 FITKSMFLAAVAWPWKICN-GAWFDGKIGIWPVADFVLVARVTPITGRREHRS*PATVNGERHKELMIEEVIPVLKASIP-GHRPH------DLRAARWCKATHVEGDHGDNPGCCGRHITLETQPINSPDPNANGLGFFHPIQQLKEDVGVTTGEEL-EEITMG------ETLE*AWQRLFAVYGADMGCKGDNSYRLPHLGKEK 1056 FITK MFLAAVA P + FDGKIG+WP + + R + + + P +V+G +K ++I +V+P ++A P G++P+ D C T HG + I++ QP NSPD N LGFF+ IQ L++ + ++L + +T+ E+L + L +V M G N+Y+LPHL K+K Sbjct: 242 FITKVMFLAAVARPRHDTHRNCAFDGKIGMWPFVEQSIAKRTSKNRPKGSIETKPLSVDGVVYKSMIINKVVPAIQAKFPVGNQPNGVFIQQDNAGPHTCVTTKFLRAHGVSG------ISMTCQPANSPDFNVLDLGFFNAIQNLQQKKPSRSIDQLIDAVTLAFDEMPIESLAKTFITLQSVMERAMEVNGGNNYKLPHLHKDK 441
BLAST of mRNA_D-mesarthrocarpus_Contig1004.6.1 vs. uniprot
Match: W4GP40_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GP40_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 9.490e-17 Identity = 71/223 (31.84%), Postives = 102/223 (45.74%), Query Frame = 1 Query: 445 EIPNPRGRRTKDGFITKSMFLAAVAWP-WKICNGAWFDGKIGIWPVADFVLVARVTPITGRREHRS*PATVNGERHKELMIEEVIPVLKASIPGHRPHDLRAARWCKATHVE-GDHGDNPGCC--GRHITLETQPINSPDPNANGLGFFHPIQQLKEDVGVTTGEELEEITMGE-------TLE*AWQRLFAVYGADMGCKGDNSYRLPHLGKEKPAWARNLS 1080 E P R ++K FITK MFL+AVA P W WFDG+IG W V R + + P TV + +++++I+ VIP +KA P + + + HV D C G I + QP NSPD N LGFF IQ L+E T +EL + T+ TL + L + G N+Y++P G+E+ AR ++ Sbjct: 111 EEPPHRSTKSKR-FITKVMFLSAVARPRWNYNTNEWFDGRIGTWHFTQTVPAQRSSRNRPSGTMVTVPCTVTRDTYRDMLIDNVIPAIKAKWPNDKAARILLQQDNARPHVPLSDERVAAACASDGWAIEVVCQPPNSPDMNVLDLGFFRAIQTLQERTRCKTIDELIDATLSAWTTVDAMTLNSNFLTLQTCLIEVVRAGGGNNYKIPPHGQEEVGQARAVT 332
BLAST of mRNA_D-mesarthrocarpus_Contig1004.6.1 vs. uniprot
Match: A0A6A4Z8M2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z8M2_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 1.190e-16 Identity = 66/206 (32.04%), Postives = 90/206 (43.69%), Query Frame = 1 Query: 484 FITKSMFLAAVAWP-WKICNGAWFDGKIGIWPVADFVLVARVTPITGRREHRS*PATVNGERHKELMIEEVIPVLKASIPGHRP--------HDLRAARWCKATHVEGDHGDNPGCCGRHITLETQPINSPDPNANGLGFFHPIQQLKEDVGVTTGEELEEITMGE-------TLE*AWQRLFAVYGADMGCKGDNSYRLPHLGKE 1053 FITK MFLAAVA P + FDGKIG+WP D V R + + + P +VN E + + ++ +VIP +K+ P D + C T D G + I + QP NSPD N LGFF+ IQ L+ + EEL + TL L V + G N Y+LPH+ K+ Sbjct: 53 FITKVMFLAAVARPRFDPHTRRVFDGKIGVWPFVDVVAAKRKSVNRDKGTLVTVPLSVNAEVYYDTVVTKVIPAIKSKFPSSTTSSGKVIIQQDNASPHKCVTTRKLDDRGISG------IEIANQPSNSPDFNVLDLGFFNSIQSLQHQKSTRSIEELVDAVQAAFYEMPVATLSKTLITLQKVMEMSIAIHGSNDYKLPHMNKD 252
BLAST of mRNA_D-mesarthrocarpus_Contig1004.6.1 vs. uniprot
Match: UPI0007F012D1 (uncharacterized protein LOC108203813 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F012D1) HSP 1 Score: 90.1 bits (222), Expect = 4.750e-16 Identity = 75/223 (33.63%), Postives = 100/223 (44.84%), Query Frame = 1 Query: 451 PNPRGRRTKDGFITKSMFLAAVAWPWKICNGAWFDGKIGIWPVADFVLVARVTP--ITGRREHRS*PATVNGERHKELMIEEVIPVLKASIP-----------GHRPH-DLRAARWCKATHVEGDHGDNPGCCGRHITLETQPINSPDPNANGLGFFHPIQQLKEDVGVTTGEELEEITMGETLE*AWQRLFAVYGADMGC-------KGDNSYRLPHLGKEK 1056 P P R FITK+MFLAAVA P NG F GKIGI+P R + + G + ++ E+ K +IE+VIP + A P +PH D A + +A +G I L QP NSPD N LGFF IQ L+ + TT EEL E ++L V+ C KGDN Y++PH+GK++ Sbjct: 126 PEPTRRVKSKRFITKAMFLAAVARP---RNG--FSGKIGIFPFTFIEPAKRNSKNRVAGTMVTKV-DESITKEKVKSCLIEKVIPAIHAKWPQGMRTIIIQQDNAKPHIDCNNAEFMQAASKDGF----------DIRLICQPPNSPDLNVLDLGFFRSIQDLQHEKAPTTIEELVAAVKQSFDEYPVEKLNRVFLTQQTCMKEIMKFKGDNDYKIPHMGKDR 332
BLAST of mRNA_D-mesarthrocarpus_Contig1004.6.1 vs. uniprot
Match: A0A6A4ZBD2_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZBD2_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.770e-15 Identity = 70/209 (33.49%), Postives = 98/209 (46.89%), Query Frame = 1 Query: 484 FITKSMFLAAVAWP-WKICNGAWFDGKIGIWPVADFVLVARVTPITGRREHRS*---PATVNGERHKELMIEEVIPVLKASIPGHR-------PHDLRAARWCKATHVEGDHGDNPGCCGRHITLETQPINSPDPNANGLGFFHPIQQLKEDVGVTTGEEL--------EEITMGETLE*AWQRLFAVYGADMGCKGDNSYRLPHLGKE 1053 FITK MFLAAVA P + A+FDGK+G+WP FV+V + R + P V+G+ +K+ +I++VIP + P D + C T V G I +E QP NSPD N LGFF+ IQ L+ + EEL E+ M +TL + L V + G N+Y+LPH+ K+ Sbjct: 208 FITKVMFLAAVARPQYDHTRNAYFDGKVGVWP---FVVVEPAKRNSKNRAKGAPVVVPQVVDGKVYKKAIIDKVIPAILERFPPRTLARGVVIQQDNASPHRCVTTEVLAQRGLEK------IRVENQPPNSPDFNVLDLGFFNSIQSLQHQKSTRSIEELIGAVEAAFYELPM-DTLSKTFITLQKVMQTSIEMLGSNNYKLPHMRKD 406 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1004.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1004.6.1 >prot_D-mesarthrocarpus_Contig1004.6.1 ID=prot_D-mesarthrocarpus_Contig1004.6.1|Name=mRNA_D-mesarthrocarpus_Contig1004.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=96bp MIEEVIPVLKASIPGHRPHDLRAARWCKATHVEGDHGDNPGCCGRHITLEback to top mRNA from alignment at D-mesarthrocarpus_Contig1004:9599..11018+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1004.6.1 ID=mRNA_D-mesarthrocarpus_Contig1004.6.1|Name=mRNA_D-mesarthrocarpus_Contig1004.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1420bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1004:9599..11018+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1004:9599..11018+ >mRNA_D-mesarthrocarpus_Contig1004.6.1 ID=mRNA_D-mesarthrocarpus_Contig1004.6.1|Name=mRNA_D-mesarthrocarpus_Contig1004.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=288bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1004:9599..11018+ (Discosporangium mesarthrocarpum MT17_79)back to top |