mRNA_D-mesarthrocarpus_Contig10037.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10037.2.1 vs. uniprot
Match: D7G8Y9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Y9_ECTSI) HSP 1 Score: 102 bits (253), Expect = 1.040e-23 Identity = 43/62 (69.35%), Postives = 55/62 (88.71%), Query Frame = 1 Query: 13 LASNLILTDSVGQKLQVQIENRLGGGGQRHVAVYCPLWMVNSSHYRLRYRQDGSKHLPSGTV 198
L S++ LTDSVGQ+++V +ENRLG GGQR+V VYCP+WMVN+SHYRLRYRQDG + +P+GTV
Sbjct: 4905 LGSSVALTDSVGQRVEVYLENRLGDGGQRNVTVYCPVWMVNTSHYRLRYRQDGQRQMPAGTV 4966
BLAST of mRNA_D-mesarthrocarpus_Contig10037.2.1 vs. uniprot
Match: A0A835ZCW3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCW3_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 5.370e-22 Identity = 38/58 (65.52%), Postives = 48/58 (82.76%), Query Frame = 1 Query: 1 GGTSLASNLILTDSVGQKLQVQIENRLGGGGQRHVAVYCPLWMVNSSHYRLRYRQDGS 174
GG AS + LTD+VGQ++ +++ENR GGGGQRHV VY P WMVN+SHYR+R+RQDGS
Sbjct: 87 GGDECASGITLTDAVGQRIALRVENRRGGGGQRHVTVYAPYWMVNTSHYRMRFRQDGS 144
BLAST of mRNA_D-mesarthrocarpus_Contig10037.2.1 vs. uniprot
Match: A0A482SP39_9ARCH (SHR-BD domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SP39_9ARCH) HSP 1 Score: 79.7 bits (195), Expect = 8.880e-18 Identity = 32/59 (54.24%), Postives = 45/59 (76.27%), Query Frame = 1 Query: 22 NLILTDSVGQKLQVQIENRLGGGGQRHVAVYCPLWMVNSSHYRLRYRQDGSKHLPSGTV 198
+++LTD+VGQKL++ +EN GGGGQRHV VYCP W+VN+S Y R R++G +G+V
Sbjct: 53 SIVLTDTVGQKLRLNVENTQGGGGQRHVVVYCPYWVVNTSQYAFRVREEGEMEQTAGSV 111
BLAST of mRNA_D-mesarthrocarpus_Contig10037.2.1 vs. uniprot
Match: A0A7S2K5S8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K5S8_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 5.730e-14 Identity = 29/56 (51.79%), Postives = 40/56 (71.43%), Query Frame = 1 Query: 28 ILTDSVGQKLQVQIENRLGGGGQRHVAVYCPLWMVNSSHYRLRYRQDGSKHLPSGT 195
++ DS GQ L + IEN GGGGQRH+ VYCP W+VN++ + LRYRQ+ ++ GT
Sbjct: 57 VIEDSQGQSLVLCIENFRGGGGQRHITVYCPYWIVNTTSHALRYRQESTREFVCGT 112
BLAST of mRNA_D-mesarthrocarpus_Contig10037.2.1 vs. uniprot
Match: A0A7S4MN01_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MN01_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 2.970e-11 Identity = 28/66 (42.42%), Postives = 45/66 (68.18%), Query Frame = 1 Query: 1 GGTSLASNLILTDSVGQKLQVQIENRLGGGGQRHVAVYCPLWMVNSSHYRLRYRQDGSKHLPSGTV 198
G +A+ + DS+GQ+L + IEN LGGGGQR + ++ P W++N++ + LRY+Q+ + SGTV
Sbjct: 934 GTEDIATETAVVDSLGQRLNLGIENILGGGGQRKITLFSPYWILNTTEHSLRYKQEKTSAYVSGTV 999
BLAST of mRNA_D-mesarthrocarpus_Contig10037.2.1 vs. uniprot
Match: A0A7S3VF66_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VF66_9STRA) HSP 1 Score: 53.5 bits (127), Expect = 7.920e-7 Identity = 21/40 (52.50%), Postives = 29/40 (72.50%), Query Frame = 1 Query: 7 TSLASNLILTDSVGQKLQVQIENRLGGGGQRHVAVYCPLW 126
T +A +TDSVGQ+L + I+N+ GGGGQRH+ + CP W
Sbjct: 187 TEVARETSVTDSVGQRLTICIDNKQGGGGQRHITISCPYW 226
BLAST of mRNA_D-mesarthrocarpus_Contig10037.2.1 vs. uniprot
Match: A0A6G0XDY9_9STRA (C2 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XDY9_9STRA) HSP 1 Score: 50.4 bits (119), Expect = 1.510e-5 Identity = 19/40 (47.50%), Postives = 31/40 (77.50%), Query Frame = 1 Query: 49 QKLQVQIENRLGGGGQRHVAVYCPLWMVNSSHYRLRYRQD 168
Q L+V+IEN +G GGQR +A++ P W++N + ++L Y+QD
Sbjct: 1248 QTLKVRIENVVGTGGQRSIALFAPYWLINLTPFQLSYKQD 1287 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10037.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10037.2.1 >prot_D-mesarthrocarpus_Contig10037.2.1 ID=prot_D-mesarthrocarpus_Contig10037.2.1|Name=mRNA_D-mesarthrocarpus_Contig10037.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=66bp GGTSLASNLILTDSVGQKLQVQIENRLGGGGQRHVAVYCPLWMVNSSHYRback to top mRNA from alignment at D-mesarthrocarpus_Contig10037:3951..4388- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10037.2.1 ID=mRNA_D-mesarthrocarpus_Contig10037.2.1|Name=mRNA_D-mesarthrocarpus_Contig10037.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=438bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10037:3951..4388- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10037:3951..4388- >mRNA_D-mesarthrocarpus_Contig10037.2.1 ID=mRNA_D-mesarthrocarpus_Contig10037.2.1|Name=mRNA_D-mesarthrocarpus_Contig10037.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=198bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10037:3951..4388- (Discosporangium mesarthrocarpum MT17_79)back to top |