mRNA_D-mesarthrocarpus_Contig10037.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10037.1.1 vs. uniprot
Match: A0A6H5KNL1_9PHAE (SHR-BD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNL1_9PHAE) HSP 1 Score: 280 bits (717), Expect = 2.270e-88 Identity = 139/179 (77.65%), Postives = 158/179 (88.27%), Query Frame = 1 Query: 1 AFMFNFGEVGVLGLGERKLCVQVEDSEWSKPFSMETVGVNQVLSVRHASKGTLEVGFNIVVPPGRLGQYTKVVQFWPRFLVVNRLGRALVLEQNSTLRRGSKKVSQVP--AGRGRPFHLPQAGGERELRIKVAGGWERSASFPVDSVGEHTIRVTRRADISRLQHITTRTASEYDVNIP 531 AFMFNF E GVLGLGERK VQVEDSEWSKPFSMETVGVNQVLSVRH GTLE+GF IVVPPGRLGQ+TKVVQFWPR LVVNRL +AL+LEQN TLR+ S++VSQVP AG G+PFHLPQ GGERELR+KV GGW+ SASFPVDSVGE+T+R+TR+ D+S+L+HI+TR +SEYDV IP Sbjct: 120 AFMFNFVETGVLGLGERKAVVQVEDSEWSKPFSMETVGVNQVLSVRHPQMGTLELGFTIVVPPGRLGQFTKVVQFWPRLLVVNRLPQALILEQNLTLRQRSERVSQVPVPAGSGQPFHLPQTGGERELRVKVEGGWKLSASFPVDSVGEYTLRLTRQVDVSKLKHISTRRSSEYDVVIP 298
BLAST of mRNA_D-mesarthrocarpus_Contig10037.1.1 vs. uniprot
Match: D7G8Y9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Y9_ECTSI) HSP 1 Score: 281 bits (718), Expect = 2.300e-84 Identity = 140/179 (78.21%), Postives = 158/179 (88.27%), Query Frame = 1 Query: 1 AFMFNFGEVGVLGLGERKLCVQVEDSEWSKPFSMETVGVNQVLSVRHASKGTLEVGFNIVVPPGRLGQYTKVVQFWPRFLVVNRLGRALVLEQNSTLRRGSKKVSQVP--AGRGRPFHLPQAGGERELRIKVAGGWERSASFPVDSVGEHTIRVTRRADISRLQHITTRTASEYDVNIP 531 AFMFNF E GVLGLGERK VQVEDSEWSKPFSMETVGVNQVLSVRH GTLE+GF IVVPPGRLGQ+TKVVQFWPR LVVNRL +ALVLEQN TLR+ S++VSQVP AG G+PFHLPQ GGERELR+KV GGW+ SASFPVDSVGE+T+R+TR+ D+S+L+HI+TR +SEYDV IP Sbjct: 5183 AFMFNFVETGVLGLGERKAVVQVEDSEWSKPFSMETVGVNQVLSVRHPQMGTLELGFTIVVPPGRLGQFTKVVQFWPRLLVVNRLPQALVLEQNLTLRQRSERVSQVPVPAGSGQPFHLPQTGGERELRVKVEGGWKLSASFPVDSVGEYTLRLTRQVDVSKLKHISTRRSSEYDVVIP 5361
BLAST of mRNA_D-mesarthrocarpus_Contig10037.1.1 vs. uniprot
Match: W7TRD9_9STRA (Vacuolar protein sorting-associated protein 13 family protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRD9_9STRA) HSP 1 Score: 149 bits (375), Expect = 3.090e-38 Identity = 77/177 (43.50%), Postives = 118/177 (66.67%), Query Frame = 1 Query: 1 AFMFNFGEVGVLGLGERKLCVQVEDSEWSKPFSMETVGVNQVLSVRHASKGTLEVGFNIVVPPGRLGQYTKVVQFWPRFLVVNRLGRALVLEQNSTLRRGSKKVSQVPAGRGRPFHLPQAGGERELRIKVAGGWERSASFPVDSVGEHTIRVTRRADISRLQHITTRTASEYDVNIP 531 +FMFN+ E L LG ++L ++V DS WSK FS++TVGVNQV++VRH G +E+GF I V PGRLGQ+TKVV F PR++V NR L L Q+ST R ++ + HLP++ E+ + +++ GG+++SA F +D+ + +R+TR D+SR++H+ TR E+D+ +P Sbjct: 3247 SFMFNYSEETPLSLGLQRLKIKVNDSAWSKSFSLDTVGVNQVITVRHPQWGDMEIGFIINVAPGRLGQFTKVVFFCPRYVVWNRHPLPLYLSQDSTYFRLGHISDEIGSHCIAQAHLPRSS-EKRVTVQLQGGYDKSAPFLIDAGADLCLRLTRLTDLSRVRHLMTRKNPEFDIQLP 3422
BLAST of mRNA_D-mesarthrocarpus_Contig10037.1.1 vs. uniprot
Match: A0A482SMA3_9ARCH (PDZ domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SMA3_9ARCH) HSP 1 Score: 139 bits (349), Expect = 7.220e-35 Identity = 69/177 (38.98%), Postives = 109/177 (61.58%), Query Frame = 1 Query: 1 AFMFNFGEVGVLGLGERKLCVQVEDSEWSKPFSMETVGVNQVLSVRHASKGTLEVGFNIVVPPGRLGQYTKVVQFWPRFLVVNRLGRALVLEQNSTLRRGSKKVSQVPAGRGRPFHLPQAGGERELRIKVAGGWERSASFPVDSVGEHTIRVTRRADISRLQHITTRTASEYDVNIP 531 ++MFNF + + RK+ +Q++D++WS+PFS+++VGVNQV+S+ H ++G LEVG + V PGRL +YTK+V+ PR VVNRL L + Q S G +++ A R +HLP GER + + G W+++ F +D +G + R D++ + H+ TR A EY V +P Sbjct: 104 SYMFNFRDSSNVLTVNRKVKMQLDDTDWSRPFSLDSVGVNQVVSIEHPTRGLLEVGVRVSVAPGRLSKYTKIVRLQPRLAVVNRLKLPLRVIQASGFA-GETTETEITANHIRAYHLPVLFGERAVAFSIDGPWQQTVFFNLDQIGAFILEARRSLDLATIPHVNTRGAPEYVVFLP 279
BLAST of mRNA_D-mesarthrocarpus_Contig10037.1.1 vs. uniprot
Match: A0A7R9UEG4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEG4_9STRA) HSP 1 Score: 134 bits (336), Expect = 5.340e-33 Identity = 71/177 (40.11%), Postives = 115/177 (64.97%), Query Frame = 1 Query: 1 AFMFNFGEVGVLGLGERKLCVQVEDSEWSKPFSMETVGVNQVLSVRHASKGTLEVGFNIVVPPGRLGQYTKVVQFWPRFLVVNRLGRALVLEQNSTLRRGSKKVSQVPAGRGRPFHLPQAGGERELRIKVAGGWERSASFPVDSVGEHTIRVTRRADISRLQHITTRTASEYDVNIP 531 +F+FNF E L RK+ + V++SE SK F+++TVGVNQ +SV H + +E+ F I + PGRLG+Y+KVV+F+PRF+ VN L R++ L Q S R G ++V +V F++P ER++ ++++G W SA+ PVD+ G++ + + R AD++ + +R +EY+V IP Sbjct: 1576 SFLFNFSERAGLLNRHRKVAISVDESERSKAFNLDTVGVNQAVSVWHPTARLIELSFVISLAPGRLGKYSKVVKFFPRFVAVNHLSRSIRLSQKSAFR-GVEEVLRVKPQSVAMFNMPHIQHERKVILEMSGSWAPSAALPVDTPGDYDVNLNRTADVAA--GLRSRGQAEYEVEIP 1749
BLAST of mRNA_D-mesarthrocarpus_Contig10037.1.1 vs. uniprot
Match: A0A7S1TUP0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TUP0_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 9.160e-21 Identity = 47/98 (47.96%), Postives = 68/98 (69.39%), Query Frame = 1 Query: 1 AFMFNFGEVGVLGLGERKLCVQVEDSEWSKPFSMETVGVNQVLSVRHASKGTLEVGFNIVVPPGRLGQYTKVVQFWPRFLVVNRLGRALVLEQNSTLR 294 +F+FNF E L RK+ + ++DSE SK FS++TVGVNQ +SV H + +E+ F I + PGRLG+Y+KVV+F+PRF+ VN L R++ L Q + R Sbjct: 112 SFLFNFSEGPGLLSRNRKVAITIDDSERSKAFSLDTVGVNQAVSVWHPTARLMELSFVISLAPGRLGKYSKVVKFFPRFVAVNHLPRSIRLAQKTAFR 209
BLAST of mRNA_D-mesarthrocarpus_Contig10037.1.1 vs. uniprot
Match: A0A7S4MN01_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MN01_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 4.970e-15 Identity = 44/105 (41.90%), Postives = 68/105 (64.76%), Query Frame = 1 Query: 1 AFMFNFGEVGVLGLGERKLCVQVED--------SEWSKPFSMETVGVNQVLSVRHASKGTLEVGFNIVVPPGRLGQYTKVVQFWPRFLVVNRLGRALVLEQNSTL 291 AFMFN+ +V L LG +KL VQ+ D S+WS FS+++VGV QV+ + +LE+ + V PGRL Q+TK+V+F PR+++VN L R + + Q+++L Sbjct: 1076 AFMFNYHDV--LSLGNQKLSVQLADTTERSKYTSDWSSGFSLDSVGVTQVVGMHCKDGRSLEISGAVSVAPGRLSQFTKIVRFCPRYILVNHLNRPIRIWQDNSL 1178
BLAST of mRNA_D-mesarthrocarpus_Contig10037.1.1 vs. uniprot
Match: A0A7S1VMU6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VMU6_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 7.650e-15 Identity = 44/105 (41.90%), Postives = 66/105 (62.86%), Query Frame = 1 Query: 1 AFMFNFGEVGVLGLGERKLCVQVED--------SEWSKPFSMETVGVNQVLSVRHASKGTLEVGFNIVVPPGRLGQYTKVVQFWPRFLVVNRLGRALVLEQNSTL 291 AFMFNF + GVL +G KL VQ+ D ++WS FS+++VGV QV+ + +LE+ + V P L YTK+V+F PRF++VN+L + + L Q+S+L Sbjct: 25 AFMFNFHD-GVLSIGHHKLSVQMADGAGFSDYSTDWSPGFSLDSVGVPQVIGMHCKDGRSLELSVTVSVAPSFLSGYTKIVRFTPRFVLVNKLEQPIRLWQDSSL 128
BLAST of mRNA_D-mesarthrocarpus_Contig10037.1.1 vs. uniprot
Match: A0A7S2UDP5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UDP5_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 5.310e-14 Identity = 45/106 (42.45%), Postives = 66/106 (62.26%), Query Frame = 1 Query: 1 AFMFNFGEVGVLGLGERKLCVQVED--------SEWSKPFSMETVGVNQVLSVRHASKGT-LEVGFNIVVPPGRLGQYTKVVQFWPRFLVVNRLGRALVLEQNSTL 291 A MFNF E + KLCVQ+ D S WS FS+++VGV Q++ + H + G LEV +I V PG+L +YTK+V+ PR+++ N+LGR + L Q+S+L Sbjct: 299 ACMFNFQETASFSSHQHKLCVQLVDTTSRSRYNSGWSSGFSLDSVGVTQIVGM-HCNDGRGLEVSVSISVAPGKLSKYTKIVRISPRYVLANQLGRPIRLWQDSSL 403
BLAST of mRNA_D-mesarthrocarpus_Contig10037.1.1 vs. uniprot
Match: A0A7S2Y632_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y632_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 9.240e-11 Identity = 39/105 (37.14%), Postives = 65/105 (61.90%), Query Frame = 1 Query: 1 AFMFNFGEVGVLGLGERKLCVQVED--------SEWSKPFSMETVGVNQVLSVRHASKGTLEVGFNIVVPPGRLGQYTKVVQFWPRFLVVNRLGRALVLEQNSTL 291 AFMFNF E + G G +KLCV++ D S+WS+ F++++VG++QV+ + LE+ PG L +YTK+++F PR++VVN L + L Q++++ Sbjct: 1269 AFMFNFHEGSMPG-GYQKLCVRLHDGTGLNRYQSDWSRGFTLDSVGISQVVDMNCKDARALELTMVTQNAPGHLFKYTKILRFLPRYVVVNNLPYPVRLWQDNSI 1372 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10037.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10037.1.1 >prot_D-mesarthrocarpus_Contig10037.1.1 ID=prot_D-mesarthrocarpus_Contig10037.1.1|Name=mRNA_D-mesarthrocarpus_Contig10037.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=175bp MFNFGEVGVLGLGERKLCVQVEDSEWSKPFSMETVGVNQVLSVRHASKGTback to top mRNA from alignment at D-mesarthrocarpus_Contig10037:1077..3000- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10037.1.1 ID=mRNA_D-mesarthrocarpus_Contig10037.1.1|Name=mRNA_D-mesarthrocarpus_Contig10037.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1924bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10037:1077..3000- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10037:1077..3000- >mRNA_D-mesarthrocarpus_Contig10037.1.1 ID=mRNA_D-mesarthrocarpus_Contig10037.1.1|Name=mRNA_D-mesarthrocarpus_Contig10037.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=525bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10037:1077..3000- (Discosporangium mesarthrocarpum MT17_79)back to top |