mRNA_D-mesarthrocarpus_Contig10035.6.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10035.6.1 vs. uniprot
Match: A0A2D7FJ94_9PROT (CarD family transcriptional regulator n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D7FJ94_9PROT) HSP 1 Score: 301 bits (771), Expect = 2.290e-100 Identity = 157/162 (96.91%), Postives = 160/162 (98.77%), Query Frame = 1 Query: 325 KKLPFSRGDYVVYPTHGVGKVTGVEKQEVAGFNLQLFVILFESEKMTLRVPVEKVADSGLRKISSKDKMMAVIATLKGRARSKRTMWSRRAQEYEAKINSGDPVAIAEVVRDLYRAPGQPEQSYSERQMYEAALERLVNEYALVEKLDVDAATEKLETVLSG 810 KKLPF+RGDYVVYPTHGVG+VTGVEKQEVAGFNLQLFVILFESEKMTLRVPVEKVADSGLRKISSKDKM AVIATLKGRARSKRTMWSRRAQEYEAKINSGDPVAIAEVVRDLYRAPGQPEQSYSERQMYEAALERLVNEYALVEKLDVD AT+KLETVLSG Sbjct: 62 KKLPFTRGDYVVYPTHGVGRVTGVEKQEVAGFNLQLFVILFESEKMTLRVPVEKVADSGLRKISSKDKMNAVIATLKGRARSKRTMWSRRAQEYEAKINSGDPVAIAEVVRDLYRAPGQPEQSYSERQMYEAALERLVNEYALVEKLDVDVATDKLETVLSG 223
BLAST of mRNA_D-mesarthrocarpus_Contig10035.6.1 vs. uniprot
Match: A0A2S6QAA4_9PROT (RNA polymerase-binding transcription factor CarD n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2S6QAA4_9PROT) HSP 1 Score: 288 bits (736), Expect = 5.270e-95 Identity = 149/163 (91.41%), Postives = 158/163 (96.93%), Query Frame = 1 Query: 319 PAKKLPFSRGDYVVYPTHGVGKVTGVEKQEVAGFNLQLFVILFESEKMTLRVPVEKVADSGLRKISSKDKMMAVIATLKGRARSKRTMWSRRAQEYEAKINSGDPVAIAEVVRDLYRAPGQPEQSYSERQMYEAALERLVNEYALVEKLDVDAATEKLETVLS 807 P+KKLPF+RGDYVVYPTHGVGKVTGVEK+EVAGF LQLFVILFESEKMTLRVPVEKVADSGLRKISSKDK+ AV ATL+GRARSKRTMWSRRAQEYEAKINSGDPVAIAEVVRDLYRA GQPEQSYSERQMYEAALERLVNEYALVEKLDV+AATEK+E +L+ Sbjct: 64 PSKKLPFARGDYVVYPTHGVGKVTGVEKREVAGFKLQLFVILFESEKMTLRVPVEKVADSGLRKISSKDKIQAVTATLRGRARSKRTMWSRRAQEYEAKINSGDPVAIAEVVRDLYRAAGQPEQSYSERQMYEAALERLVNEYALVEKLDVEAATEKIEGILA 226
BLAST of mRNA_D-mesarthrocarpus_Contig10035.6.1 vs. uniprot
Match: A0A2D8PQ34_9PROT (CarD family transcriptional regulator n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PQ34_9PROT) HSP 1 Score: 286 bits (732), Expect = 1.740e-94 Identity = 144/163 (88.34%), Postives = 160/163 (98.16%), Query Frame = 1 Query: 322 AKKLPFSRGDYVVYPTHGVGKVTGVEKQEVAGFNLQLFVILFESEKMTLRVPVEKVADSGLRKISSKDKMMAVIATLKGRARSKRTMWSRRAQEYEAKINSGDPVAIAEVVRDLYRAPGQPEQSYSERQMYEAALERLVNEYALVEKLDVDAATEKLETVLSG 810 AKKLPF++GDYVVYPTHGVGKVTG+EK+EVAGF+LQLFVI+F+SEKMTLRVP+EKVA SGLRKISSKDKM AV+ATLKGRARSKRTMWSRRAQEYEAKINSGDPVAIAEVVRDLYRAPGQPEQSYSERQMYEAALERLV+E+ALVE+LDVDAAT+K+E +L+G Sbjct: 59 AKKLPFAKGDYVVYPTHGVGKVTGIEKREVAGFSLQLFVIMFDSEKMTLRVPIEKVAASGLRKISSKDKMQAVVATLKGRARSKRTMWSRRAQEYEAKINSGDPVAIAEVVRDLYRAPGQPEQSYSERQMYEAALERLVHEFALVERLDVDAATQKIEDILAG 221
BLAST of mRNA_D-mesarthrocarpus_Contig10035.6.1 vs. uniprot
Match: A0A520NW31_9PROT (CarD family transcriptional regulator n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A520NW31_9PROT) HSP 1 Score: 286 bits (733), Expect = 3.750e-94 Identity = 147/160 (91.88%), Postives = 157/160 (98.12%), Query Frame = 1 Query: 331 LPFSRGDYVVYPTHGVGKVTGVEKQEVAGFNLQLFVILFESEKMTLRVPVEKVADSGLRKISSKDKMMAVIATLKGRARSKRTMWSRRAQEYEAKINSGDPVAIAEVVRDLYRAPGQPEQSYSERQMYEAALERLVNEYALVEKLDVDAATEKLETVLSG 810 LPF++GDYVVYPTHGVGKVTG+E++EVAGFNLQLFVILF+SEKMTLRVPVEKVADSGLRKISSKDKM AV ATLKGRARSKRTMWSRRAQEYEAKINSGDPVAIAEVVRDLYRA GQPEQSYSERQMYEAALERLVNEYALVEKLDV+AATEK+E+VL+G Sbjct: 95 LPFAKGDYVVYPTHGVGKVTGIERREVAGFNLQLFVILFDSEKMTLRVPVEKVADSGLRKISSKDKMQAVTATLKGRARSKRTMWSRRAQEYEAKINSGDPVAIAEVVRDLYRAAGQPEQSYSERQMYEAALERLVNEYALVEKLDVEAATEKIESVLAG 254
BLAST of mRNA_D-mesarthrocarpus_Contig10035.6.1 vs. uniprot
Match: A0A2E6GRZ8_9PROT (CarD family transcriptional regulator n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6GRZ8_9PROT) HSP 1 Score: 241 bits (615), Expect = 2.120e-77 Identity = 127/164 (77.44%), Postives = 141/164 (85.98%), Query Frame = 1 Query: 322 AKKLPFSRGDYVVYPTHGVGKVTGVEKQEVAGFNLQLFVILFESEKMTLRVPVEKVADSGLRKISSKDKMMAVIATLKGRARSKRTMWSRRAQEYEAKINSGDPVAIAEVVRDLYRAPGQPEQSYSERQMYEAALERLVNEYALVEKLDVDAATEKLETVLSGA 813 AKKLPFS DYVVYPTHGVG+VT + K+EVAGF+LQLFVI F +EKMTLRVPV K +SGLRKISSKDKM I TLKGRAR+KRTMWSRRAQEYEAKINSGDPVAIAEVVRDL+R P QP+QSYSERQMYEAA+ RL E ALVEK++ DAAT+KLE +L A Sbjct: 11 AKKLPFSVKDYVVYPTHGVGQVTDIVKEEVAGFDLQLFVINFAAEKMTLRVPVGKAQESGLRKISSKDKMQTAIGTLKGRARAKRTMWSRRAQEYEAKINSGDPVAIAEVVRDLHRPPDQPDQSYSERQMYEAAINRLALELALVEKIEPDAATQKLENMLIKA 174
BLAST of mRNA_D-mesarthrocarpus_Contig10035.6.1 vs. uniprot
Match: A0A6N7FA69_9PROT (CarD family transcriptional regulator n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FA69_9PROT) HSP 1 Score: 238 bits (607), Expect = 3.030e-76 Identity = 119/160 (74.38%), Postives = 142/160 (88.75%), Query Frame = 1 Query: 325 KKLPFSRGDYVVYPTHGVGKVTGVEKQEVAGFNLQLFVILFESEKMTLRVPVEKVADSGLRKISSKDKMMAVIATLKGRARSKRTMWSRRAQEYEAKINSGDPVAIAEVVRDLYRAPGQPEQSYSERQMYEAALERLVNEYALVEKLDVDAATEKLETVL 804 +KLPF+ GDYVVYPTHGVGKV + K+++AGF LQLFVI F ++KMTLRVPV+K +SGLRKIS+++KM + I TL+GRAR+KRTMWSRRAQEYEAKINSGDPV+IAEVVRDL+R P QP+QSYSERQMYEAAL RL +E ALVEK+D DAATE+LET+L Sbjct: 7 QKLPFAVGDYVVYPTHGVGKVVDIAKEQIAGFELQLFVINFAADKMTLRVPVDKAEESGLRKISTREKMQSAITTLRGRARAKRTMWSRRAQEYEAKINSGDPVSIAEVVRDLHRNPDQPDQSYSERQMYEAALTRLAHELALVEKIDADAATERLETLL 166
BLAST of mRNA_D-mesarthrocarpus_Contig10035.6.1 vs. uniprot
Match: A0A2E5V770_9PROT (CarD family transcriptional regulator n=3 Tax=Rhodospirillales TaxID=204441 RepID=A0A2E5V770_9PROT) HSP 1 Score: 238 bits (606), Expect = 4.920e-76 Identity = 124/164 (75.61%), Postives = 140/164 (85.37%), Query Frame = 1 Query: 322 AKKLPFSRGDYVVYPTHGVGKVTGVEKQEVAGFNLQLFVILFESEKMTLRVPVEKVADSGLRKISSKDKMMAVIATLKGRARSKRTMWSRRAQEYEAKINSGDPVAIAEVVRDLYRAPGQPEQSYSERQMYEAALERLVNEYALVEKLDVDAATEKLETVLSGA 813 AKKLPF DYVVYPTHGVG+V + K+EVAGF LQLFVI F +EKMTLRVPV KV +SGLRKISSKDKM A + TLKGRAR+KRTMWSRRAQEY+AKINSGDPVAIAEVVRDL+R P QP+QSYSERQMYE+A+ RL E ALVEK++VD AT+KLE +L A Sbjct: 11 AKKLPFVVKDYVVYPTHGVGQVIDIVKEEVAGFKLQLFVIRFAAEKMTLRVPVGKVEESGLRKISSKDKMQAAVGTLKGRARAKRTMWSRRAQEYDAKINSGDPVAIAEVVRDLHRPPDQPDQSYSERQMYESAISRLALELALVEKIEVDVATQKLENMLFKA 174
BLAST of mRNA_D-mesarthrocarpus_Contig10035.6.1 vs. uniprot
Match: A0A2E3K486_9PROT (CarD family transcriptional regulator n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E3K486_9PROT) HSP 1 Score: 229 bits (585), Expect = 6.370e-73 Identity = 120/164 (73.17%), Postives = 138/164 (84.15%), Query Frame = 1 Query: 322 AKKLPFSRGDYVVYPTHGVGKVTGVEKQEVAGFNLQLFVILFESEKMTLRVPVEKVADSGLRKISSKDKMMAVIATLKGRARSKRTMWSRRAQEYEAKINSGDPVAIAEVVRDLYRAPGQPEQSYSERQMYEAALERLVNEYALVEKLDVDAATEKLETVLSGA 813 +KKLPFS DYVVYPTHGVG+VT + +E+AGF+LQL+VI F +EKMTLRVPVEK +GLRKISSKD M I L+G+AR+KRTMWSRRAQEYE KINSGDPVAIAEVVRDLYR P QP+QSYSERQMYE+AL RL E ALVEK++ DAATEKLE++L A Sbjct: 6 SKKLPFSIKDYVVYPTHGVGQVTEISSEEIAGFSLQLYVIHFTAEKMTLRVPVEKAEYAGLRKISSKDNMQNAIKALRGKARAKRTMWSRRAQEYEMKINSGDPVAIAEVVRDLYRKPDQPDQSYSERQMYESALGRLALEVALVEKIEPDAATEKLESLLLKA 169
BLAST of mRNA_D-mesarthrocarpus_Contig10035.6.1 vs. uniprot
Match: A0A4R3JD95_9PROT (CarD family transcriptional regulator n=1 Tax=Varunaivibrio sulfuroxidans TaxID=1773489 RepID=A0A4R3JD95_9PROT) HSP 1 Score: 224 bits (572), Expect = 5.050e-71 Identity = 114/164 (69.51%), Postives = 138/164 (84.15%), Query Frame = 1 Query: 322 AKKLPFSRGDYVVYPTHGVGKVTGVEKQEVAGFNLQLFVILFESEKMTLRVPVEKVADSGLRKISSKDKMMAVIATLKGRARSKRTMWSRRAQEYEAKINSGDPVAIAEVVRDLYRAPGQPEQSYSERQMYEAALERLVNEYALVEKLDVDAATEKLETVLSGA 813 A+++ F GD+VVYPTHGVGKVT +EKQE+ G L+L+VI F SE+MTLRVP KVA SGLRK+S+K M + ++TLKGRAR KRTMWSRRAQEYEAKINSGDPVAIAEVVRDL+R+ QP+QS+SERQ+YEAALERL +E A V+K DVD AT+KLE +L+ A Sbjct: 2 AEEMTFKSGDFVVYPTHGVGKVTDIEKQEIGGHQLKLYVITFSSERMTLRVPTSKVATSGLRKLSTKKMMESALSTLKGRARVKRTMWSRRAQEYEAKINSGDPVAIAEVVRDLHRSTDQPDQSFSERQIYEAALERLASEVAAVDKTDVDKATKKLEVLLTAA 165
BLAST of mRNA_D-mesarthrocarpus_Contig10035.6.1 vs. uniprot
Match: A0A2E5KP41_9PROT (CarD family transcriptional regulator n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E5KP41_9PROT) HSP 1 Score: 226 bits (575), Expect = 2.270e-70 Identity = 113/164 (68.90%), Postives = 137/164 (83.54%), Query Frame = 1 Query: 322 AKKLPFSRGDYVVYPTHGVGKVTGVEKQEVAGFNLQLFVILFESEKMTLRVPVEKVADSGLRKISSKDKMMAVIATLKGRARSKRTMWSRRAQEYEAKINSGDPVAIAEVVRDLYRAPGQPEQSYSERQMYEAALERLVNEYALVEKLDVDAATEKLETVLSGA 813 A KLPF+ DYVVYPTHGVGK+TGVEKQE++G +L+LFV+ F+ +KM LRVP+ K SG+RK+S+ KM ++TLKGRAR KRTMWSRRAQEYEAKINSGDPV+IAEV+RDL+R+ QPEQSYSERQ+YEAALERL E A VE++D DAATE+LE +L A Sbjct: 80 APKLPFAVNDYVVYPTHGVGKITGVEKQEISGMDLELFVVEFDKDKMVLRVPLAKAEGSGMRKLSTPQKMTNALSTLKGRARIKRTMWSRRAQEYEAKINSGDPVSIAEVIRDLHRSANQPEQSYSERQIYEAALERLARELAAVERIDEDAATERLEGMLRAA 243 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10035.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10035.6.1 >prot_D-mesarthrocarpus_Contig10035.6.1 ID=prot_D-mesarthrocarpus_Contig10035.6.1|Name=mRNA_D-mesarthrocarpus_Contig10035.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=272bp MAQAKTTTKSKAKTASKTAAAKKPAAKSAKTASKPASKPAAKTAAKTAAKback to top mRNA from alignment at D-mesarthrocarpus_Contig10035:2899..3714+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10035.6.1 ID=mRNA_D-mesarthrocarpus_Contig10035.6.1|Name=mRNA_D-mesarthrocarpus_Contig10035.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=816bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10035:2899..3714+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10035:2899..3714+ >mRNA_D-mesarthrocarpus_Contig10035.6.1 ID=mRNA_D-mesarthrocarpus_Contig10035.6.1|Name=mRNA_D-mesarthrocarpus_Contig10035.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=816bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10035:2899..3714+ (Discosporangium mesarthrocarpum MT17_79)back to top |