mRNA_D-mesarthrocarpus_Contig10035.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10035.1.1 vs. uniprot
Match: A0A2D7FJ82_9PROT (Disulfide oxidoreductase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D7FJ82_9PROT) HSP 1 Score: 342 bits (878), Expect = 1.080e-111 Identity = 178/216 (82.41%), Postives = 190/216 (87.96%), Query Frame = 1 Query: 1 VARGLAYQVVEGLGSLPRQRVVKDVRELSKEDRSALRSCGVRIGAETLFVPSLVKPKAVQWRAMLWKLFNERETAPPPGAGLVTVPAGDDLPEDFLEACGYAKLGCRAVRIDVLDRIAIDLQRQSRAGKMEIGAAQLNLLGLSMEDARPVFEGLGYVAEEVGEELTWKWGGRRKPKSDRPKRXXXXXXXXXXXXXXKPKPIDENSPFAKLKDLKFS 648 +ARGLAYQVVEGLGSLPR RVVKDVR LSKEDRSALRSCGVRIGAETLF+PSLVKPKAV+WRAMLWK+F ERE APPPG GLVTVPAG+DLPEDFLEACGYAK+G RAVR+DVLDRIAIDLQRQSR GKM+IGA QLNLLGLSM+ ARP+FEGLGYVAEE GEEL WKWGGRRK + DR XXXXX KP PIDE+SPFAKLKDLKFS Sbjct: 442 IARGLAYQVVEGLGSLPRHRVVKDVRGLSKEDRSALRSCGVRIGAETLFLPSLVKPKAVKWRAMLWKIFYEREAAPPPGPGLVTVPAGNDLPEDFLEACGYAKIGGRAVRVDVLDRIAIDLQRQSRVGKMDIGATQLNLLGLSMKAARPMFEGLGYVAEEAGEELIWKWGGRRKLRPDRXXXXXXXXPKRAEKKHRKPTPIDEHSPFAKLKDLKFS 657
BLAST of mRNA_D-mesarthrocarpus_Contig10035.1.1 vs. uniprot
Match: A0A3D2BSU4_9PROT (Disulfide oxidoreductase n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A3D2BSU4_9PROT) HSP 1 Score: 283 bits (725), Expect = 3.500e-87 Identity = 153/220 (69.55%), Postives = 184/220 (83.64%), Query Frame = 1 Query: 1 VARGLAYQVVEGLGSLPRQRVVKDVRELSKEDRSALRSCGVRIGAETLFVPSLVKPKAVQWRAMLWKLFNERETAPPPGAGLVTVPAGDDLPEDFLEACGYAKLGCRAVRIDVLDRIAIDLQRQSRAGKMEIGAAQLNLLGLSMEDARPVFEGLGYVAEEVGEELTWKWGGRRKPKSDRPKRXXXXXXXXXXXXXXKP----KPIDENSPFAKLKDLKFS 648 +ARGLAY++VEGLGS+PR +V+ ++R++SKEDRSALRSCGVRIG ETLF+P+LVKPKAVQWRA+LW LFN++ PGAGLVTVPAG+D DFL ACG+A LG RA+R+DVLDR+A+DLQRQSRAGKM++GA QLNLLGLS++DARPVFEGLGYVAEE G+ L WKW GR K S R ++ XXXXXXXXXXX + IDENSPFAKL++LK S Sbjct: 627 LARGLAYRIVEGLGSIPRVQVLAELRDMSKEDRSALRSCGVRIGPETLFLPTLVKPKAVQWRALLWALFNDKLAPTIPGAGLVTVPAGEDADTDFLAACGFACLGGRAIRVDVLDRVAVDLQRQSRAGKMDVGAIQLNLLGLSLDDARPVFEGLGYVAEEEGDTLVWKWNGRPKTMSGRSRKGKPXXXXXXXXXXXXXXXXXQKIDENSPFAKLRELKLS 846
BLAST of mRNA_D-mesarthrocarpus_Contig10035.1.1 vs. uniprot
Match: A0A2S6QAH8_9PROT (Helicase C-terminal domain-containing protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2S6QAH8_9PROT) HSP 1 Score: 265 bits (677), Expect = 4.840e-80 Identity = 135/220 (61.36%), Postives = 166/220 (75.45%), Query Frame = 1 Query: 1 VARGLAYQVVEGLGSLPRQRVVKDVRELSKEDRSALRSCGVRIGAETLFVPSLVKPKAVQWRAMLWKLFNERETAPPPGAGLVTVPAGDDLPEDFLEACGYAKLGCRAVRIDVLDRIAIDLQRQSRAGKMEIGAAQLNLLGLSMEDARPVFEGLGYVAEEVGEELTWKWGGRRKPKSDRPKRXXXXXXXXXXXXXXKPKP----IDENSPFAKLKDLKFS 648 VARGLAY++VEGLGS+ R +V++++ ++SKEDR+ALRSCGVRIG ETLF+P+LVKPKAV+WRA+LW L N PGAGLVTVP G+D E FL ACG++ LG RA+R+DVLDRIA+DLQRQSR GKM+IGAAQLNLLGLSM DARP+FE LGYVAEE G+ LTW+WGGR K KS + K +++ SPFAKL++LK S Sbjct: 649 VARGLAYRIVEGLGSIRRAQVLQELSQMSKEDRTALRSCGVRIGPETLFLPALVKPKAVKWRALLWALSNGISVQEVPGAGLVTVPVGEDSDESFLAACGFSCLGKRAIRVDVLDRIAVDLQRQSRTGKMDIGAAQLNLLGLSMADARPIFEALGYVAEENGDTLTWRWGGRPKTKSRNLHKDEAGFLTRRSGNRRKKSSKKGKVEDESPFAKLRELKLS 868
BLAST of mRNA_D-mesarthrocarpus_Contig10035.1.1 vs. uniprot
Match: A0A2D8PQA9_9PROT (Disulfide oxidoreductase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PQA9_9PROT) HSP 1 Score: 259 bits (662), Expect = 4.810e-78 Identity = 140/216 (64.81%), Postives = 170/216 (78.70%), Query Frame = 1 Query: 1 VARGLAYQVVEGLGSLPRQRVVKDVRELSKEDRSALRSCGVRIGAETLFVPSLVKPKAVQWRAMLWKLFNERETAPPPGAGLVTVPAGDDLPEDFLEACGYAKLGCRAVRIDVLDRIAIDLQRQSRAGKMEIGAAQLNLLGLSMEDARPVFEGLGYVAEEVGEELTWKWGGRRKPKSDRPKRXXXXXXXXXXXXXXKPKPIDENSPFAKLKDLKFS 648 V RG+ Y+++E LGSLPR +V++DVR L+KEDR LR+CG+R+G E+LFVP+LVKPKAVQWRA+LWK R+ PPP GLVTVPA D +P D+L ACG+ +LG RAVR+DVLDR+A+DLQRQSRAG + IGA QLNLLGLSME+ARP+FE LGY A E + LTWKW GR K K+ XXXXXXXXXXX K IDE+SPFAKL++LK S Sbjct: 627 VVRGIVYRLIENLGSLPRTQVLRDVRALTKEDRLTLRACGIRVGPESLFVPALVKPKAVQWRALLWKTHTGRDVPPPPAPGLVTVPAIDGMPGDYLAACGFYRLGARAVRVDVLDRLAVDLQRQSRAGDLTIGAVQLNLLGLSMEEARPIFEALGYAATETEDGLTWKWAGRPTNKRGGNKQKKGXXXXXXXXXXXXXK-IDEDSPFAKLRELKLS 841
BLAST of mRNA_D-mesarthrocarpus_Contig10035.1.1 vs. uniprot
Match: A0A6N7FCY3_9PROT (Disulfide oxidoreductase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FCY3_9PROT) HSP 1 Score: 155 bits (391), Expect = 7.270e-40 Identity = 112/243 (46.09%), Postives = 142/243 (58.44%), Query Frame = 1 Query: 4 ARGLAYQVVEGLGSLPRQRVVKDVRELSKEDRSALRSCGVRIGAETLFVPSLVKPKAVQWRAMLWKLFNERETAP-PPGAGLVTVPAGDDLPEDFLEACGYAKLGCRAVRIDVLDRIAIDLQRQSRAGKMEIGAAQLNLLGLSMEDARPVFEGLGY---VAEEVGEELTWKWGGRRKPKSDR----------------------PKRXXXXXXXXXXXXXXKPK---PIDENSPFAKLKDLKF 645 ARGLA+Q+ E LGSLPR+R + L+ EDR LR+ +R+G E +F+P L+KPKAV RA+LW L + E P PP GLVTVPA +PE F A G+ LG RAVRID+LDR+AI + + R G + A L LGLS+E P+ LGY VAEE G + G R+P+ DR PKR XXXXXXXXXX + + PID +SPFAKL +L+F Sbjct: 629 ARGLAFQLREALGSLPRRRCAAQIAALTPEDRKMLRALHIRLGMEAVFLPDLLKPKAVALRAVLWALRDGGERRPAPPAPGLVTVPADARVPESFYAAVGFRVLGGRAVRIDMLDRVAILMAGRMRKGPFPLDAELLTPLGLSVEQMAPIVSSLGYRVTVAEEGGATVE---GRVRRPRRDRXXXXXXXXXXXXXXXXXXADRKPKRPPXXXXXXXXXXESRQRRERPIDPDSPFAKLAELRF 868
BLAST of mRNA_D-mesarthrocarpus_Contig10035.1.1 vs. uniprot
Match: A0A1M7TX76_9RHOB (ATP-dependent RNA helicase SUPV3L1/SUV3 n=2 Tax=Oceanicella actignis TaxID=1189325 RepID=A0A1M7TX76_9RHOB) HSP 1 Score: 136 bits (342), Expect = 2.980e-33 Identity = 70/161 (43.48%), Postives = 102/161 (63.35%), Query Frame = 1 Query: 1 VARGLAYQVVEGLGSLPRQRVVKDVRELSKEDRSALRSCGVRIGAETLFVPSLVKPKAVQWRAMLWKLFNERET-APPPGAGLVTVPAGDDLPEDFLEACGYAKLGCRAVRIDVLDRIAIDLQRQSRAGKMEIGAAQLNLLGLSMEDARPVFEGLGYVAEE 480 +ARG+A+Q+VE LG +PR R+ +DV+ L +E R+ LR GVR G T+F+P+L+KP + R +LW L+ E E AP P GLVT+PA LP+DF GY G RA+RID+L+R+A ++ E A L++ G +++ + EGLGY AE+ Sbjct: 638 LARGVAFQLVEALGVIPRPRIAQDVKSLDQEGRAQLRKHGVRFGQHTVFMPALLKPAPTRLRLILWGLWEEHEEFAPAPPPGLVTIPAQPGLPDDFYPRAGYRLAGSRAIRIDMLERLADMIRALDARAGFEATADMLSITGCTLDQFAELMEGLGYKAEK 798
BLAST of mRNA_D-mesarthrocarpus_Contig10035.1.1 vs. uniprot
Match: UPI0004873BCB (disulfide oxidoreductase n=1 Tax=Pseudooceanicola nanhaiensis TaxID=375761 RepID=UPI0004873BCB) HSP 1 Score: 135 bits (341), Expect = 4.050e-33 Identity = 73/163 (44.79%), Postives = 103/163 (63.19%), Query Frame = 1 Query: 1 VARGLAYQVVEGLGSLPRQRVVKDVRELSKEDRSALRSCGVRIGAETLFVPSLVKPKAVQWRAMLWKLFN---ERETAPPPGAGLVTVPAGDDLPEDFLEACGYAKLGCRAVRIDVLDRIAIDLQRQSRAGKMEIGAAQLNLLGLSMEDARPVFEGLGYVAEE 480 +ARG A+Q+VEGLG +PRQ+V +DV+ L ++ R ALR GVR G T+F+P L+KP + R +LW L N E APPPG LVTVP D PE + GY G RA+RID+L+R+A L+ + G E A L++ G++++ + +GLGY AE+ Sbjct: 629 MARGFAFQMVEGLGIIPRQKVAEDVKSLDQDARGALRKHGVRFGQFTVFMPLLLKPAPTRLRLVLWSLANGLDEFPEAPPPG--LVTVPVHDGAPEGYHTMAGYRAAGTRAIRIDMLERLADMLRNEDSRGGFEAKADMLSITGMTLDQFADLMQGLGYKAEK 789
BLAST of mRNA_D-mesarthrocarpus_Contig10035.1.1 vs. uniprot
Match: A0A849FBM4_9RHOB (Disulfide oxidoreductase n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A849FBM4_9RHOB) HSP 1 Score: 134 bits (338), Expect = 1.010e-32 Identity = 72/161 (44.72%), Postives = 103/161 (63.98%), Query Frame = 1 Query: 1 VARGLAYQVVEGLGSLPRQRVVKDVRELSKEDRSALRSCGVRIGAETLFVPSLVKPKAVQWRAMLWKL---FNERETAPPPGAGLVTVPAGDDLPEDFLEACGYAKLGCRAVRIDVLDRIAIDLQRQSRAGKMEIGAAQLNLLGLSMEDARPVFEGLGYVA 474 +ARG A+Q+VE LG +PR RV +V+EL ++ R ALR G+R G T+F+P+L+KP + R +LW L F+E +PPPG LVTVP D PE + E GY G RA+RID+L+R+A L+ + G +E A L++ G+++E + EGLGY A Sbjct: 627 LARGFAFQMVEALGVVPRSRVASEVKELDQDARGALRKHGIRFGQFTIFMPALLKPAPTRLRLVLWSLAGGFDEFPESPPPG--LVTVPTAKDAPEGYHEMAGYRAAGERAIRIDMLERLADMLRAEDTRGGVEAKADMLSITGMTLEQFANLMEGLGYRA 785
BLAST of mRNA_D-mesarthrocarpus_Contig10035.1.1 vs. uniprot
Match: A0A8J3MBS1_9RHOB (ATP-dependent helicase MgpS n=1 Tax=Pseudodonghicola xiamenensis TaxID=337702 RepID=A0A8J3MBS1_9RHOB) HSP 1 Score: 134 bits (338), Expect = 1.020e-32 Identity = 77/181 (42.54%), Postives = 108/181 (59.67%), Query Frame = 1 Query: 1 VARGLAYQVVEGLGSLPRQRVVKDVRELSKEDRSALRSCGVRIGAETLFVPSLVKPKAVQWRAMLWKL---FNERETAPPPGAGLVTVPAGDDLPEDFLEACGYAKLGCRAVRIDVLDRIAIDLQRQSRAGKMEIGAAQLNLLGLSMEDARPVFEGLGYVAEEVGEELTWKWGGRRKPKSD 534 +ARG A+Q VE LG LPR +V +DV+ L +E R ALR G+R G T+F+P L+KP + R +LW L ++ TAPPPG LVTVP D+PE + CGY G RA+RID+L+R+A L+ Q E L++ G+++E + EGLGY AE+ GE + K P ++ Sbjct: 627 LARGFAFQTVEALGILPRAQVAQDVKALDQEARGALRKHGIRFGQFTIFMPLLLKPAPTRLRLLLWSLAKGLDDFPTAPPPG--LVTVPVATDVPEGYDTMCGYRNAGERAIRIDMLERLADLLRGQDSRAGFEATPDMLSITGMTLEQFATLMEGLGYRAEK-GERVKVKAAAEPAPAAE 804
BLAST of mRNA_D-mesarthrocarpus_Contig10035.1.1 vs. uniprot
Match: A0A7Y4TD58_9PROT (Helicase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7Y4TD58_9PROT) HSP 1 Score: 134 bits (337), Expect = 1.380e-32 Identity = 76/192 (39.58%), Postives = 119/192 (61.98%), Query Frame = 1 Query: 1 VARGLAYQVVEGLGSLPRQRVVKDVRELSKEDRSALRSCGVRIGAETLFVPSLVKPKAVQWRAMLWKLFNE-RETAPPPGAGLVTVPAGDDLPEDFLEACGYAKLGCRAVRIDVLDRIAIDLQRQSRAGKMEIGAA----QLNLLGLSMEDARPVFEGLGY----VAEEVGEELT-WKWGGRRKPKSDRPKR 546 +ARGLA+Q+ E LGS+ RQ V++++R +++ DR+ LR GVR GA ++F+P+LVKP A + +A+LW + E PPP AGL ++P+ +P F EA G+ G RAVRID+L+R+ ++ + ++G+M G A +++LG +D V LG+ V E GEE T W+ +R + RP+R Sbjct: 696 MARGLAFQIYENLGSVSRQSVMRELRAVAQGDRTPLRRLGVRFGAFSIFLPALVKPAAARLKALLWAVHQGITEIPPPPAAGLTSLPSDPSVPAGFYEAAGFRLCGPRAVRIDMLERLGDIIRGKGQSGQMPDGFAVSNDMMSVLGCGEDDIAQVLRSLGFRDAKVKNEAGEETTLWQQRTKRPERGPRPQR 887 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10035.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10035.1.1 >prot_D-mesarthrocarpus_Contig10035.1.1 ID=prot_D-mesarthrocarpus_Contig10035.1.1|Name=mRNA_D-mesarthrocarpus_Contig10035.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=217bp VARGLAYQVVEGLGSLPRQRVVKDVRELSKEDRSALRSCGVRIGAETLFVback to top mRNA from alignment at D-mesarthrocarpus_Contig10035:2..652+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10035.1.1 ID=mRNA_D-mesarthrocarpus_Contig10035.1.1|Name=mRNA_D-mesarthrocarpus_Contig10035.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=651bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10035:2..652+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10035:2..652+ >mRNA_D-mesarthrocarpus_Contig10035.1.1 ID=mRNA_D-mesarthrocarpus_Contig10035.1.1|Name=mRNA_D-mesarthrocarpus_Contig10035.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=651bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10035:2..652+ (Discosporangium mesarthrocarpum MT17_79)back to top |