mRNA_D-mesarthrocarpus_Contig10028.1.2 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10028.1.2 vs. uniprot
Match: D8LGX1_ECTSI (Acyl-coenzyme A dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGX1_ECTSI) HSP 1 Score: 223 bits (569), Expect = 9.390e-66 Identity = 113/152 (74.34%), Postives = 131/152 (86.18%), Query Frame = 2 Query: 62 M*QILFDIEDAFFGIFANFPVRPLAWTMRGVAFPTGRCYPLPSDALSKEVAQLVSTDSEVRDLFAENVFFSKDPMDRMTLINRTLPKAIAADDILRKLRREKREATSEEQGLIDEAEAAREIIIQVDSFPGLGKEMEQGRDFSAENRPALDD 517 M + L DIEDAF+GIFANFP + L+ MRGVAFPTGRCY PSD L++EV+QL+STD++VR+LF ENVF S DPM+RMTLI+ TLPKA+ AD +LR LRREKREAT++EQ LIDE EAAREIIIQVDSFPGLGKEM+ GRDFS ENRPALDD Sbjct: 611 MQRTLADIEDAFYGIFANFPSKTLSLAMRGVAFPTGRCYQQPSDTLAQEVSQLISTDTQVRELFKENVFLSNDPMNRMTLIDATLPKAVQADGVLRTLRREKREATADEQALIDEVEAAREIIIQVDSFPGLGKEMQDGRDFSPENRPALDD 762
BLAST of mRNA_D-mesarthrocarpus_Contig10028.1.2 vs. uniprot
Match: A0A835YIS3_9STRA (Acyl-coenzyme A dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIS3_9STRA) HSP 1 Score: 192 bits (489), Expect = 2.230e-54 Identity = 103/156 (66.03%), Postives = 121/156 (77.56%), Query Frame = 2 Query: 50 RNHHM*QILFDIEDAFFGIFANFPVRPLAWTMRGVAFPTGRCYPLPSDALSKEVAQLVSTDSEVRDLFAENVFFSKDPMDRMTLINRTLPKAIAADDILRKLRREKREATSEEQGLIDEAEAAREIIIQVDSFPGLGKEMEQGRDFSAENRPALDD 517 R++ M +L + EDAF+GIF NFP RPLAW MRG+AFPTGR Y PSD L+KEV++LVSTDS VRDLF + F S DP DR+ LI+ TLPKA+ AD++L+ LRREKR+AT EQ LIDE EAAREIIIQVDSF GLG+E G D SA RPALDD Sbjct: 594 RDYAMQGLLAETEDAFYGIFDNFPTRPLAWAMRGMAFPTGRTYRRPSDDLAKEVSRLVSTDSAVRDLFVSHTFVSADPSDRVALIHATLPKAVRADEVLKTLRREKRDATPAEQALIDEVEAAREIIIQVDSFKGLGQERAAGFDQSA--RPALDD 747
BLAST of mRNA_D-mesarthrocarpus_Contig10028.1.2 vs. uniprot
Match: W7TNX9_9STRA (Acyl-coenzyme A dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNX9_9STRA) HSP 1 Score: 164 bits (414), Expect = 7.780e-44 Identity = 84/150 (56.00%), Postives = 110/150 (73.33%), Query Frame = 2 Query: 68 QILFDIEDAFFGIFANFPVRPLAWTMRGVAFPTGRCYPLPSDALSKEVAQLVSTDSEVRDLFAENVFFSKDPMDRMTLINRTLPKAIAADDILRKLRREKREATSEEQGLIDEAEAAREIIIQVDSFPGLGKEMEQGRDFSAENRPALDD 517 IL DI+DAF+GI N+P+RP+ W + + FPTG+ Y PSD L+ +VAQL+S S VRDL +++++ KD DR+ L+N TLPKA+ D+I KLR+EKR AT+EEQ LIDE EAAREIIIQVDSFP LG+E + + E+RPAL D Sbjct: 603 NILVDIQDAFYGIAENYPIRPVGWAIHALTFPTGKTYVRPSDKLTTQVAQLISKPSGVRDLLSQDIYVHKDLNDRVALLNATLPKAVKVDEIYTKLRKEKRTATAEEQKLIDEVEAAREIIIQVDSFPSLGQESVT-KGWKTEDRPALQD 751
BLAST of mRNA_D-mesarthrocarpus_Contig10028.1.2 vs. uniprot
Match: A0A7S1TSJ0_9STRA (Acyl-coenzyme A dehydrogenase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSJ0_9STRA) HSP 1 Score: 159 bits (402), Expect = 3.380e-42 Identity = 90/156 (57.69%), Postives = 105/156 (67.31%), Query Frame = 2 Query: 53 NHHM*QILFDIEDAFFGIFANFPVRPLAWTMRGVAFPTGRCYPLPSDALSKEVAQLVSTDSEVRDLFAENVFFSKDP-MDRMTLINRTLPKAIAADDILRKLRREKREATSEEQGLIDEAEAAREIIIQVDSFPGLGKEMEQGRDFSAENRPALDD 517 N M I D EDAFFGIF NFP+ P MRGV FP GR Y PSD K VAQLVST+S RDL EN F D DR+ L++ TLPKA+ AD IL+ LR+EKR+AT+ EQ LIDE EAARE IIQVDSF LG E+ + + AE+RPA +D Sbjct: 593 NFAMANITKDTEDAFFGIFENFPMTPFGLFMRGVCFPFGRTYSAPSDEEMKAVAQLVSTNSAFRDLMTENTFIHGDAAQDRVALLHATLPKAVEADKILKALRKEKRKATTAEQALIDEVEAAREEIIQVDSFERLGSEINEAAGWKAEDRPAFND 748
BLAST of mRNA_D-mesarthrocarpus_Contig10028.1.2 vs. uniprot
Match: A0A7S1TSL9_9STRA (Acyl-coenzyme A dehydrogenase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSL9_9STRA) HSP 1 Score: 156 bits (395), Expect = 3.130e-41 Identity = 83/151 (54.97%), Postives = 102/151 (67.55%), Query Frame = 2 Query: 68 QILFDIEDAFFGIFANFPVRPLAWTMRGVAFPTGRCYPLPSDALSKEVAQLVSTDSEVRDLFAENVFFSKDPM-DRMTLINRTLPKAIAADDILRKLRREKREATSEEQGLIDEAEAAREIIIQVDSFPGLGKEMEQGRDFSAENRPALDD 517 I DIEDAFFGIFANFP+RP W M+ FP GR Y P D K+VAQLVSTD++ R+L E F DP DR+ L+ TLPKA+ AD +L+ R+EKR T+ EQ LI+E EAARE IIQVDSF LG E+ + + AE+RPA +D Sbjct: 598 NITADIEDAFFGIFANFPIRPAGWFMQATTFPLGRTYERPGDNQMKKVAQLVSTDNQFRELMQEGTFVHSDPTKDRIALLMATLPKAVKADAVLKACRKEKRSPTAAEQALIEEVEAAREEIIQVDSFERLGSEINEAAGWKAEDRPAFND 748
BLAST of mRNA_D-mesarthrocarpus_Contig10028.1.2 vs. uniprot
Match: A0A8K1C449_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C449_PYTOL) HSP 1 Score: 149 bits (376), Expect = 1.310e-38 Identity = 84/153 (54.90%), Postives = 107/153 (69.93%), Query Frame = 2 Query: 53 NHHM*QILFDIEDAFFGIFANFPVRPLAWTMRGVAFPTGRCYPLPSDALSKEVAQLVSTDSEVRDLFAENVFFSKDPMDRMTLINRTLPKAIAADDILRKLRREKREATSEEQGLIDEAEAAREIIIQVDSFPGLGKEMEQGRDFSAENRPAL 511 ++ M Q+ +D ++ GI NFPV + MR ++FP GR Y LPSD K+VA L+STDS VR+L +E+VF S P DR+ LIN TL KA+ AD IL KLR+EKR AT+EEQ LIDE EAARE IIQVDSF GLG E+ + +D+ RPA+ Sbjct: 607 DYTMNQLCYDAQEGLIGISKNFPVPGVGLAMRTLSFPFGRTYDLPSDKDRKKVADLISTDSAVRNLLSESVFVSSKPTDRVHLINATLGKAVEADKILAKLRKEKRNATTEEQKLIDEVEAAREQIIQVDSFEGLGAELYKPKDYV---RPAM 756
BLAST of mRNA_D-mesarthrocarpus_Contig10028.1.2 vs. uniprot
Match: A0A6G0WY16_9STRA (Acyl-coenzyme A dehydrogenase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WY16_9STRA) HSP 1 Score: 149 bits (375), Expect = 1.750e-38 Identity = 81/139 (58.27%), Postives = 102/139 (73.38%), Query Frame = 2 Query: 53 NHHM*QILFDIEDAFFGIFANFPVRPLAWTMRGVAFPTGRCYPLPSDALSKEVAQLVSTDSEVRDLFAENVFFSKDPMDRMTLINRTLPKAIAADDILRKLRREKREATSEEQGLIDEAEAAREIIIQVDSFPGLGKEM 469 ++ M +I +D ++ +GI ANFPV + M ++FP GR Y LP+D+ VA+LVSTDS VRDLFA N+F S P DR+ LI++TLPKAI AD IL KLR+EKR AT EEQ LIDE EAAREIIIQVD+F LG+E+ Sbjct: 591 DYSMTKICYDAQETIYGIGANFPVPGIGPLMTSLSFPLGRDYKLPTDSQIAAVAELVSTDSGVRDLFATNMFISDKPDDRVALIHKTLPKAIKADAILSKLRKEKRSATPEEQALIDEVEAAREIIIQVDAFQALGQEI 729
BLAST of mRNA_D-mesarthrocarpus_Contig10028.1.2 vs. uniprot
Match: A0A067CJK1_SAPPC (Acyl-coenzyme A dehydrogenase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CJK1_SAPPC) HSP 1 Score: 148 bits (373), Expect = 3.240e-38 Identity = 80/145 (55.17%), Postives = 103/145 (71.03%), Query Frame = 2 Query: 53 NHHM*QILFDIEDAFFGIFANFPVRPLAWTMRGVAFPTGRCYPLPSDALSKEVAQLVSTDSEVRDLFAENVFFSKDPMDRMTLINRTLPKAIAADDILRKLRREKREATSEEQGLIDEAEAAREIIIQVDSFPGLGKEMEQGRDF 487 ++ M + ++ + A +GI NFPV + MR V FP G+ Y PSDA ++VA LVS+DS +RDLFAE++F SKDP DR+ LI+ TLPKAI AD +L LR+EKR AT+ EQ LIDE EAARE IIQVD+F GLGKE+ D+ Sbjct: 593 DYAMTSLCYEAQTALYGIQDNFPVPGIGGAMRAVTFPFGQSYAPPSDAQVRKVADLVSSDSGIRDLFAESMFISKDPEDRIALIHATLPKAIKADAVLATLRKEKRSATAAEQALIDEVEAAREKIIQVDAFDGLGKEIGAPADY 737
BLAST of mRNA_D-mesarthrocarpus_Contig10028.1.2 vs. uniprot
Match: F0W2G4_9STRA (Acyl-coenzyme A dehydrogenase n=2 Tax=Albugo TaxID=65356 RepID=F0W2G4_9STRA) HSP 1 Score: 144 bits (364), Expect = 5.590e-37 Identity = 82/164 (50.00%), Postives = 111/164 (67.68%), Query Frame = 2 Query: 32 TVGWVDR--NHHM*QILFDIEDAFFGIFANFPVRPLAWTMRGVAFPTGRCYPLPSDALSKEVAQLVSTDSEVRDLFAENVFFSKDPMDRMTLINRTLPKAIAADDILRKLRREKREATSEEQGLIDEAEAAREIIIQVDSFPGLGKEMEQGRDFSAENRPALDD 517 TV +D ++ M Q+L + ++ +GI NFP + MRG+ FP GR Y +P DA ++V+ L++ D+ VR+L ++++F S DR+TL+N TLPKA+ ADD+L KLR+EKR AT+EEQ LIDE EAAREIIIQVDSF LG E Q D+ RPAL D Sbjct: 587 TVEGIDTIFDYAMMQLLSEAQEGIYGISQNFPGFGVGSVMRGLTFPFGRVYQMPDDAQIRKVSSLLAADTPVRNLLSDSIFISSKQDDRVTLLNATLPKAMVADDVLMKLRKEKRSATTEEQKLIDEVEAAREIIIQVDSFSTLGNESNQPSDYV---RPALVD 747
BLAST of mRNA_D-mesarthrocarpus_Contig10028.1.2 vs. uniprot
Match: A0A2D4BZH2_PYTIN (Acyl-coenzyme A dehydrogenase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZH2_PYTIN) HSP 1 Score: 144 bits (363), Expect = 7.440e-37 Identity = 77/153 (50.33%), Postives = 105/153 (68.63%), Query Frame = 2 Query: 53 NHHM*QILFDIEDAFFGIFANFPVRPLAWTMRGVAFPTGRCYPLPSDALSKEVAQLVSTDSEVRDLFAENVFFSKDPMDRMTLINRTLPKAIAADDILRKLRREKREATSEEQGLIDEAEAAREIIIQVDSFPGLGKEMEQGRDFSAENRPAL 511 ++ M Q+ ++ ++ GI NFP + MR + FP GR Y +PSD K+VA L+STDS +R+L +++VF SKDP DR+ ++N TL KA+ AD +L KLR+EKR AT+EEQ LIDE EAARE IIQVDSF GLG E + + + RPA+ Sbjct: 578 DYAMTQLCYEAQEGLIGISKNFPTPGVGLAMRALTFPFGRTYEMPSDKEMKKVADLISTDSGIRNLLSDSVFVSKDPKDRVAMLNATLAKAVEADKVLAKLRKEKRNATAEEQKLIDEVEAAREEIIQVDSFVGLGAETSKPQGYV---RPAI 727 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10028.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10028.1.2 >prot_D-mesarthrocarpus_Contig10028.1.2 ID=prot_D-mesarthrocarpus_Contig10028.1.2|Name=mRNA_D-mesarthrocarpus_Contig10028.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=125bp MRGVAFPTGRCYPLPSDALSKEVAQLVSTDSEVRDLFAENVFFSKDPMDRback to top mRNA from alignment at D-mesarthrocarpus_Contig10028:244..3677+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10028.1.2 ID=mRNA_D-mesarthrocarpus_Contig10028.1.2|Name=mRNA_D-mesarthrocarpus_Contig10028.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3434bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10028:244..3677+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10028:244..3677+ >mRNA_D-mesarthrocarpus_Contig10028.1.2 ID=mRNA_D-mesarthrocarpus_Contig10028.1.2|Name=mRNA_D-mesarthrocarpus_Contig10028.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=375bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10028:244..3677+ (Discosporangium mesarthrocarpum MT17_79)back to top |