mRNA_D-mesarthrocarpus_Contig10025.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10025.1.1 vs. uniprot
Match: A0A6H5K5B9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5B9_9PHAE) HSP 1 Score: 155 bits (391), Expect = 1.390e-40 Identity = 90/213 (42.25%), Postives = 126/213 (59.15%), Query Frame = 1 Query: 1 IDHITTCLRTLQGG--VRELDHAFLVGGFSNCVMLQEAVRAELT--GLNVLATMRPEMAIVKGAVLFAGRPMVFNTRKARLTYGVSCLSEYRDDDLEHVQRKATVRGPMGPS-DTLYIPIFSSLLRRGDDVPWDGGCVNHGYFPIESDQSRISFKVLASHKRDIQFPDKDKHFILGNFDVPVNMCAPFGERGVRVEMRFGGPELLVTCFEEKT 624 ID I CLR+L+G +R+L + FLVGGFS C ++Q+A RAEL G V+ R E+AIV+GA +FA + F+ R A+LTYGV Y + EHV+R+++ P+ S I FS+ ++RG VP DG C Y P+ +Q+ +SF++LA H DI+FPD D F LG V ++M A F +RG+ E F E L+ CF T Sbjct: 375 IDKIGNCLRSLRGKPLLRDLKYVFLVGGFSCCPLVQQAARAELDRGGCRVIDVDRRELAIVRGATIFASNQLAFS-RIAKLTYGVKSTCIYDSSNAEHVKRRSSP--PIWDSAGKEVIDAFSTHIKRGAYVPSDGTCTRRCYGPLRPNQTTVSFQILACHHTDIEFPDTDSTFPLGEVTVNLDMRASFEDRGIAAEFVFCESEFLLRCFRGTT 584
BLAST of mRNA_D-mesarthrocarpus_Contig10025.1.1 vs. uniprot
Match: A0A6H5KHR9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHR9_9PHAE) HSP 1 Score: 141 bits (356), Expect = 7.400e-38 Identity = 75/205 (36.59%), Postives = 113/205 (55.12%), Query Frame = 1 Query: 1 IDHITTCLRTL--QGGVRELDHAFLVGGFSNCVMLQEAVRA--ELTGLNVLATMRPEMAIVKGAVLFAGRPMVFNTRKARLTYGVSCLSEYRDDDLEHVQRKATVRGPMGPSDTLYIPIFSSLLRRGDDVPWDGGCVNHGYFPIESDQSRISFKVLASHKRDIQFPDKDKHFILGNFDVPVNMCAPFGERGVRVEMRFGGPELLV 603 + I CL+ + + + +L F+VGGFS C ML+E VR +L V+ P++AIVKGAV++ R +FN+RKAR TYG +C+ + D EH +R+A T FS +R+GDD+P G Y P+++ Q +SF V S +R+ F D+ F +G ++M F +RG+ E+ FGGPEL+V Sbjct: 76 LQKIAECLQRIKRESSLHDLYRVFVVGGFSRCPMLREVVRTGLDLPAGRVVLVHEPDLAIVKGAVMYFNRSTIFNSRKARYTYGTNCVVPFNDSIAEHRRRRAAGMCSTHNGKTCLPNAFSVYIRKGDDIPVGGILKRRSYIPLKNSQQAMSFPVYGSSERNPSFADEKGCFEVGRVSFALDMTKEFEKRGIIGEVTFGGPELIV 280
BLAST of mRNA_D-mesarthrocarpus_Contig10025.1.1 vs. uniprot
Match: A0A6H5JSM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSM6_9PHAE) HSP 1 Score: 146 bits (368), Expect = 2.300e-37 Identity = 77/211 (36.49%), Postives = 116/211 (54.98%), Query Frame = 1 Query: 1 IDHITTCLRTL--QGGVRELDHAFLVGGFSNCVMLQEAVRA--ELTGLNVLATMRPEMAIVKGAVLFAGRPMVFNTRKARLTYGVSCLSEYRDDDLEHVQRKATVRGPMGPSDTLYIPIFSSLLRRGDDVPWDGGCVNHGYFPIESDQSRISFKVLASHKRDIQFPDKDKHFILGNFDVPVNMCAPFGERGVRVEMRFGGPELLVTCFEEK 621 +D I CLR + + + +L F+VGGFS C ML+E VR +L V+ P++AIVKGAV++ R +FN+RKAR TYG +C+ + D EH +R+A T FS +R+GDD+P G Y P+++ Q +SF V S +R+ F D+ F +G ++M F +RG+ E+ FGGPEL+V + + Sbjct: 365 LDKIAECLRRIKRESSLHDLYRVFVVGGFSRCPMLREVVRTGLDLPAGRVVLVHEPDLAIVKGAVMYFNRSTIFNSRKARYTYGTNCVVPFNDSIAEHRRRRAAGMCATHNGKTCLPNAFSVYIRKGDDIPVGGILKRRSYIPLKNSQQAMSFPVYGSSERNPSFADEKGCFEVGRVSFALDMTKQFEKRGIIGEVTFGGPELIVKILDSE 575
BLAST of mRNA_D-mesarthrocarpus_Contig10025.1.1 vs. uniprot
Match: D7G6V4_ECTSI (Heat shock protein 70 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6V4_ECTSI) HSP 1 Score: 132 bits (333), Expect = 1.780e-32 Identity = 74/211 (35.07%), Postives = 112/211 (53.08%), Query Frame = 1 Query: 1 IDHITTCLRTL--QGGVRELDHAFLVGGFSNCVMLQEAVR--AELTGLNVLATMRPEMAIVKGAVLFAGRPMVFNTRKARLTYGVSCLSEYRDDDLEHVQRKATVRGPMGPSDTLYIPIFSSLLRRGDDVPWDGGCVNHGYFPIESDQSRISFKVLASHKRDIQFPDKDKHFILGNFDVPVNMCAPFGERGVRVEMRFGGPELLVTCFEEK 621 + I CLR + + + +L F+VGGFS C ML+E +R +L V+ P++AIVKGAV++ R FN+RKAR TYG + D + EH +R+A FS +R+GDD+P G Y P++ Q+ +SF V + +R+ F D++ F +G P++M F +RG+ EM FGGPEL V + + Sbjct: 361 LQKIAECLRRIKRESQLHDLHRVFVVGGFSRCPMLREVIRNGLDLPAGRVVDVHEPDLAIVKGAVMYFDRSTSFNSRKARYTYGTGFAVPFDDSNAEHRRRRAAGLVSHHDGKVHVSNGFSIYIRKGDDIPEGGILKRRRYGPLKKSQTSMSFAVYCTSERNPSFADENGCFEVGRVSFPLDMTKEFQKRGIVGEMTFGGPELTVKIVDHE 571
BLAST of mRNA_D-mesarthrocarpus_Contig10025.1.1 vs. uniprot
Match: D7FKB7_ECTSI (Heat shock protein 70 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKB7_ECTSI) HSP 1 Score: 133 bits (334), Expect = 2.160e-32 Identity = 81/216 (37.50%), Postives = 114/216 (52.78%), Query Frame = 1 Query: 1 IDHITTCLRTLQGG--VRELDHAFLVGGFSNCVMLQEAVRAELTGLN--VLATMRPEMAIVKGAVLFAGRPMVFNTRKARLTYGVSCLSEYRDDDLEHVQRK-ATVRGPMGPSDTLYIP-IFSSLLRRGDDVPWDGGCVNHGYFPIESDQSRISFKVLASHKRDIQFPDKDKHFILGNFDVPVNMCAPFG-ERGVRVEMRFGGPELLVTCFEEKTE 627 +D I CLR ++GG +R L F+VGGFS C +L + VRAEL + V+ P++AIV+GAV + VFN+R+ARLTYG S L + + + EH +R+ A D + + F +R G++VP +G Y P+ + +V AS RD F D+D F+LG P++M ER RVE FGGPEL V E Sbjct: 465 LDSIARCLRGIKGGSALRNLHRVFVVGGFSRCPLLMQVVRAELQNASCRVVEVSEPDIAIVRGAVKYFDESAVFNSRRARLTYGASVLHAFDEKNAEHRRRRDAGETLKYDDRDEVMVDGCFFPHIRIGENVPTNGVTSRENYTPVSLENETNCIQVYASSARDPAFVDEDSCFMLGKISFPLDMTKKTRQERAYRVEFTFGGPELTVKILHRTEE 680
BLAST of mRNA_D-mesarthrocarpus_Contig10025.1.1 vs. uniprot
Match: A0A8B6DTC7_MYTGA (Uncharacterized protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6DTC7_MYTGA) HSP 1 Score: 107 bits (268), Expect = 1.850e-23 Identity = 68/210 (32.38%), Postives = 109/210 (51.90%), Query Frame = 1 Query: 1 IDHITTCLRTLQGGVRELDHAFLVGGFSNCVMLQEAVRAELTGLNVLATMRPEMAIVKGAVLFAGRPMVFNTRKARLTYGVSCLSEYRDDDLEHVQRKATVRGPMGPSDTLYIPIFSSLLRRGDDVPWDGGCVNHGYFPIESDQSRISFKVLASHKRDIQFPDKDKHFILGNFDVPVNM--CAPFGERGVRVEMRFGGPELLVTCFEEKT 624 ++H++ R Q V +L F+VGG+S C +LQEA+R + + L VL ++++KGAVL+ P F +R + TYG+ +R V +K + G + IF ++ G+ V G V+ Y I+ DQ+ + F V AS KR +F D+D F LG+ V V+ C +GE+ +R+E+ +GG EL + T Sbjct: 879 VNHLSILFR--QSQVTDLTTMFMVGGYSECYLLQEAIRFKFSSLRVLIPPNSVLSVLKGAVLYGHSPRTFQSRISTFTYGIETTEPFRKG--YPVDKKLFINGK-----SHCDKIFCIHVKDGEHVNL-GKSVSKAYKTIDPDQTHMEFIVYASIKRTPKFTDEDGCFQLGSLTVDVSKMSCNKYGEKQIRLELIYGGTELEAIATDTTT 1078
BLAST of mRNA_D-mesarthrocarpus_Contig10025.1.1 vs. uniprot
Match: A0A6J8BTB8_MYTCO (Uncharacterized protein n=2 Tax=Mytilus TaxID=6548 RepID=A0A6J8BTB8_MYTCO) HSP 1 Score: 105 bits (263), Expect = 7.950e-23 Identity = 67/210 (31.90%), Postives = 108/210 (51.43%), Query Frame = 1 Query: 1 IDHITTCLRTLQGGVRELDHAFLVGGFSNCVMLQEAVRAELTGLNVLATMRPEMAIVKGAVLFAGRPMVFNTRKARLTYGVSCLSEYRDDDLEHVQRKATVRGPMGPSDTLYIPIFSSLLRRGDDVPWDGGCVNHGYFPIESDQSRISFKVLASHKRDIQFPDKDKHFILGNFDVPVNM--CAPFGERGVRVEMRFGGPELLVTCFEEKT 624 ++H++ R Q V +L F+VGG+S C +LQEA+R + L VL + ++++KGAVL+ P F +R + TYG+ +R V +K + G + IF ++ G+ V G V+ Y I DQ+ + F V AS KR +F D+D F LG+ V V+ C +GE+ +++E+ +GG EL + T Sbjct: 514 VNHLSILFR--QSQVTDLTTIFMVGGYSECYLLQEAIRFKFNSLRVLIPPKSVLSVLKGAVLYGHSPRTFQSRISTFTYGIETTEPFRKG--YPVDKKIFINGK-----SHCDKIFCIHVKDGEHVNL-GKSVSKIYKTINPDQTHMEFIVFASIKRSPKFTDEDGCFQLGSLTVDVSKMSCNTYGEKQIKLELIYGGTELEAVATDTTT 713
BLAST of mRNA_D-mesarthrocarpus_Contig10025.1.1 vs. uniprot
Match: A0A8B6CSW2_MYTGA (Uncharacterized protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6CSW2_MYTGA) HSP 1 Score: 96.3 bits (238), Expect = 1.610e-19 Identity = 58/193 (30.05%), Postives = 94/193 (48.70%), Query Frame = 1 Query: 46 RELDHAFLVGGFSNCVMLQEAVRAELTGLNVLATMRPEMAIVKGAVLFAGRPMVFNTRKARLTYGVSCLSEYRDDDLEHVQRKATVRGPMGPSDTLYIPIFSSLLRRGDDVPWDGGCVNHGYFPIESDQSRISFKVLASHKRDIQFPDKDKHFILGNFDVPVNMCAPFGERGVRVEMRFGGPELLVTCFEEKT 624 R +D +VGGFS C M+QEA++ + + ++ +A+VKGAVLF P +RKA+ TYGV ++++ D + +K V+G SD +FS + G V YFP+ SD + + S D + + LG VP+ + ++ + V+M FGG E+ V E+K+ Sbjct: 405 RGVDTILMVGGFSECAMIQEAIKTNFSHMKIIIPEDAGLAVVKGAVLFGHNPATIVSRKAKYTYGVKITRDFKEGDPQ--DKKYQVKGRNKCSD-----VFSKHVEIGQTVKVGESLNPQSYFPLHSDVEEVVVPLYISTDEDPSYTTEPSCNYLGKIVVPLKGSS-VKDKEIVVQMTFGGTEMTVEAEEKKS 589
BLAST of mRNA_D-mesarthrocarpus_Contig10025.1.1 vs. uniprot
Match: A0A087X5Q4_POEFO (Heat shock 70 kDa protein 12A-like n=2 Tax=Poecilia TaxID=8080 RepID=A0A087X5Q4_POEFO) HSP 1 Score: 95.1 bits (235), Expect = 3.890e-19 Identity = 63/208 (30.29%), Postives = 108/208 (51.92%), Query Frame = 1 Query: 10 ITTCLRTLQGGVRELDHAFLVGGFSNCVMLQEAVRAEL-TGLNVLATMRPEMAIVKGAVLFAGRPMVFNTRKARLTYGVSCLSEYRDDDLEHVQRKATVRGPMGPSDTLYIPIFSSLLRRGDDVPWDGGCVNHGYFPIESDQSRISFKVLASHKRDIQFPDKDKHFILGNFDVPVNMCAPFG--ERGVRVEMRFGGPELLVTCFEEKT 624 IT LR + + LVGGF++ +L++ + + N+L +RP+ AI++GAV F P + +RK+R TYGV+ L ++ + + ++K T G D IF LL G+DV WD +H ++ Q +S ++ S +++ ++ D+ +G+F V +C P ER V+VE++FG PE+ T + T Sbjct: 356 ITMSLREIFKKDLHIGFILLVGGFADSQILRQHINEQFGEEYNILCPVRPQEAILRGAVEFGRNPKIVASRKSRFTYGVATLERFKSEHRQ--EKKITADGKEWCQD-----IFKKLLEEGEDVGWDE-TRDHILDAVDPQQKEMSVRLFRSERKNPRYVDEWGVEEVGSFIV--KLCDPERNKERKVKVELKFGSPEITATGTDPST 553
BLAST of mRNA_D-mesarthrocarpus_Contig10025.1.1 vs. uniprot
Match: UPI001458180B (heat shock 70 kDa protein 12A-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001458180B) HSP 1 Score: 92.4 bits (228), Expect = 3.460e-18 Identity = 57/206 (27.67%), Postives = 98/206 (47.57%), Query Frame = 1 Query: 1 IDHITTCLRTLQGGVRELDHAFLVGGFSNCVMLQEAVRAELTGLNVLATMRPEMAIVKGAVLFAGRPMVFNTRKARLTYGVSCLSEYRDDDLEHVQRKATVRGPMGPSDTLYIPIFSSLLRRGDDVPWDGGCVNHGYFPIESDQSRISFKVLASHKRDIQFPDKDKHFILGNFDVPVNMCAPFGERGVRVEMRFGGPELLVTCFEE 618 ++H+ L+ + R + +VGGFS CV++Q+A+R V+ +A+VKGAVLF P+ +RK++ TYG+S ++ D + Q++ VRG S+ +FS + +P Y P+ +D + K+ S + + ++ LG DVP++ + + V+M FG EL V EE Sbjct: 383 VEHVRDLLK--KEACRNVSTLLMVGGFSECVLIQDAIRKNFPDKRVIIPEDAGLAVVKGAVLFGHNPLTIVSRKSKFTYGISISRRFQPGDPD--QKRFNVRGIDKCSN-----VFSKHVEVNQTIPVGEALETQTYTPLYADSKSVVVKIFTSSEENPRYTTDPSCDYLGKIDVPLSPGSDENTT-IEVKMTFGDTELTVEASEE 578 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10025.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10025.1.1 >prot_D-mesarthrocarpus_Contig10025.1.1 ID=prot_D-mesarthrocarpus_Contig10025.1.1|Name=mRNA_D-mesarthrocarpus_Contig10025.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=209bp IDHITTCLRTLQGGVRELDHAFLVGGFSNCVMLQEAVRAELTGLNVLATMback to top mRNA from alignment at D-mesarthrocarpus_Contig10025:3933..4559- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10025.1.1 ID=mRNA_D-mesarthrocarpus_Contig10025.1.1|Name=mRNA_D-mesarthrocarpus_Contig10025.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=627bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10025:3933..4559- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10025:3933..4559- >mRNA_D-mesarthrocarpus_Contig10025.1.1 ID=mRNA_D-mesarthrocarpus_Contig10025.1.1|Name=mRNA_D-mesarthrocarpus_Contig10025.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=627bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10025:3933..4559- (Discosporangium mesarthrocarpum MT17_79)back to top |