mRNA_D-mesarthrocarpus_Contig10021.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10021.2.1 vs. uniprot
Match: A0A3D2BR89_9PROT (DUF4440 domain-containing protein n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A3D2BR89_9PROT) HSP 1 Score: 202 bits (513), Expect = 1.220e-64 Identity = 96/123 (78.05%), Postives = 108/123 (87.80%), Query Frame = 1 Query: 13 DNDIAELRNLEERRYAAMLAGDADVLEELLHDDLAYMHSTGELESKQSYIDTLRAGTSAYKMIRVDDQKIRIHADIGMVFHHLEADVVFQGNERHLDNRLLAVWSRDAGKWRMLGLQSGPVVK 381 D+DIAELR+LEERRYAAM AGD DVLEELLHD+LAYMHSTG+LESK+ Y+ LRAGTSAYK I DDQ IR+H D+ MVFHHL AD VF+G++RHLDNRLLAVWSRD GKWRM+GLQSGP VK Sbjct: 26 DSDIAELRDLEERRYAAMKAGDIDVLEELLHDELAYMHSTGDLESKEGYLGGLRAGTSAYKRIEYDDQTIRVHDDLAMVFHHLVADAVFEGSDRHLDNRLLAVWSRDGGKWRMIGLQSGPAVK 148
BLAST of mRNA_D-mesarthrocarpus_Contig10021.2.1 vs. uniprot
Match: A0A2D7FLS4_9PROT (DUF4440 domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D7FLS4_9PROT) HSP 1 Score: 195 bits (495), Expect = 3.400e-62 Identity = 95/127 (74.80%), Postives = 109/127 (85.83%), Query Frame = 1 Query: 1 MSKHDNDIAELRNLEERRYAAMLAGDADVLEELLHDDLAYMHSTGELESKQSYIDTLRAGTSAYKMIRVDDQKIRIHADIGMVFHHLEADVVFQGNERHLDNRLLAVWSRDAGKWRMLGLQSGPVVK 381 MS +++I LR LEERRYAAMLAGDA VLEELLH +LAYMHSTGELESK+SY+ TLRAGTSAYK I+ DDQ IRI+ ++G+VFHHLEADVVF+GN RHLDNRLLAVW RD G W+ML LQSGPV + Sbjct: 1 MSDAESEILNLRALEERRYAAMLAGDAGVLEELLHPELAYMHSTGELESKESYLRTLRAGTSAYKSIKCDDQTIRIYKEVGLVFHHLEADVVFEGNARHLDNRLLAVWVRDGGNWQMLALQSGPVPR 127
BLAST of mRNA_D-mesarthrocarpus_Contig10021.2.1 vs. uniprot
Match: A0A2S6QCD2_9PROT (DUF4440 domain-containing protein n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6QCD2_9PROT) HSP 1 Score: 189 bits (481), Expect = 4.070e-60 Identity = 90/121 (74.38%), Postives = 105/121 (86.78%), Query Frame = 1 Query: 19 DIAELRNLEERRYAAMLAGDADVLEELLHDDLAYMHSTGELESKQSYIDTLRAGTSAYKMIRVDDQKIRIHADIGMVFHHLEADVVFQGNERHLDNRLLAVWSRDAGKWRMLGLQSGPVVK 381 DI EL +LEE+RY+AML D VLE+LLHDDLAYMHSTG+LE+K+SY+ +L GTSAYKMIR +D+ IR+H +IG+VFHHLEADVVF G ERHLDNRLLAVWSRD GKWRML LQSGPVV+ Sbjct: 3 DITELEDLEEKRYSAMLDADVAVLEDLLHDDLAYMHSTGDLENKESYVSSLSEGTSAYKMIRCNDRTIRVHNNIGLVFHHLEADVVFHGIERHLDNRLLAVWSRDGGKWRMLALQSGPVVR 123
BLAST of mRNA_D-mesarthrocarpus_Contig10021.2.1 vs. uniprot
Match: A0A2D8G4I1_9PROT (DUF4440 domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2D8G4I1_9PROT) HSP 1 Score: 180 bits (457), Expect = 1.970e-56 Identity = 85/121 (70.25%), Postives = 100/121 (82.64%), Query Frame = 1 Query: 19 DIAELRNLEERRYAAMLAGDADVLEELLHDDLAYMHSTGELESKQSYIDTLRAGTSAYKMIRVDDQKIRIHADIGMVFHHLEADVVFQGNERHLDNRLLAVWSRDAGKWRMLGLQSGPVVK 381 DI+ +R+LEERRY AM GD LE LLHD+LAYMHSTG+LESK+ Y+D LR+GTSAYK I DQKIR+H DI MVFHHL AD VF GN+RHLDNRLLA+W R+ G+WRM+GLQSGPV+K Sbjct: 5 DISLIRDLEERRYTAMREGDIKALEVLLHDELAYMHSTGDLESKKGYLDGLRSGTSAYKKIEYGDQKIRVHGDIAMVFHHLIADAVFAGNDRHLDNRLLAIWVREDGQWRMIGLQSGPVLK 125
BLAST of mRNA_D-mesarthrocarpus_Contig10021.2.1 vs. uniprot
Match: A0A2E3XBS4_9PROT (DUF4440 domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E3XBS4_9PROT) HSP 1 Score: 131 bits (330), Expect = 4.850e-37 Identity = 61/121 (50.41%), Postives = 86/121 (71.07%), Query Frame = 1 Query: 19 DIAELRNLEERRYAAMLAGDADVLEELLHDDLAYMHSTGELESKQSYIDTLRAGTSAYKMIRVDDQKIRIHADIGMVFHHLEADVVFQGNERHLDNRLLAVWSRDAGKWRMLGLQSGPVVK 381 D+A++ LE +RY AML D VL +LLH++L Y HSTG L++K+ Y++ LR S YK ++ DDQ +RI DIG+VF+H++ +G+E LDNRLLAVW+RD G WR+L +QSG + K Sbjct: 7 DVAKIEELENKRYDAMLNADIHVLNDLLHENLIYSHSTGGLDTKEIYLNALRDKVSIYKSVKRDDQTVRITGDIGLVFNHVQIHAEHKGSELRLDNRLLAVWTRDKGIWRLLAIQSGAIPK 127
BLAST of mRNA_D-mesarthrocarpus_Contig10021.2.1 vs. uniprot
Match: UPI00159C36E5 (nuclear transport factor 2 family protein n=1 Tax=Sphingobium sp. 15-1 TaxID=2729616 RepID=UPI00159C36E5) HSP 1 Score: 103 bits (257), Expect = 5.400e-26 Identity = 45/118 (38.14%), Postives = 79/118 (66.95%), Query Frame = 1 Query: 28 ELRNLEERRYAAMLAGDADVLEELLHDDLAYMHSTGELESKQSYIDTLRAGTSAYKMIRVDDQKIRIHADIGMVFHHLEADVVFQGNERHLDNRLLAVWSRDAGKWRMLGLQSGPVVK 381 ++R+ E+ R+AA++ D LE LLH +L Y HS+G +++++YI+ LRAG Y+ + ++ I + G+VF+ L D++F+G +H++ R L+VW RD G+WR++ +QSG V + Sbjct: 8 QIRDAEDARFAAVIGADIPALESLLHKELLYRHSSGFADTRETYIEGLRAGLWVYRAVDRSEETISVSGHTGLVFNRLCIDLLFRGERKHVNARALSVWVRDDGQWRLIAVQSGAVPR 125
BLAST of mRNA_D-mesarthrocarpus_Contig10021.2.1 vs. uniprot
Match: UPI001CAF4583 (nuclear transport factor 2 family protein n=1 Tax=Cupriavidus laharis TaxID=151654 RepID=UPI001CAF4583) HSP 1 Score: 98.2 bits (243), Expect = 8.840e-24 Identity = 49/123 (39.84%), Postives = 71/123 (57.72%), Query Frame = 1 Query: 13 DNDIAELRNLEERRYAAMLAGDADVLEELLHDDLAYMHSTGELESKQSYIDTLRAGTSAYKMIRVDDQKIRIHADIGMVFHHLEADVVFQGNERHLDNRLLAVWSRDAGKWRMLGLQSGPVVK 381 D ++EL ++ RY AML GD D L+ LLH+DL+Y HS+ E K +Y+++LR+G Y V + ++H D+ ++ + ER LDNR L+VW RD G WRML S P+ K Sbjct: 12 DQALSELDRADQARYRAMLDGDLDALDRLLHEDLSYTHSSALQEGKAAYLESLRSGHVRYXXADVQEVVRQLHGDVAVMQGKALLRAIVDEVERTLDNRFLSVWKRDGGGWRMLAWASTPIPK 134
BLAST of mRNA_D-mesarthrocarpus_Contig10021.2.1 vs. uniprot
Match: UPI001FEDFAA5 (nuclear transport factor 2 family protein n=1 Tax=Burkholderia perseverans TaxID=2615214 RepID=UPI001FEDFAA5) HSP 1 Score: 96.7 bits (239), Expect = 2.630e-23 Identity = 49/120 (40.83%), Postives = 71/120 (59.17%), Query Frame = 1 Query: 16 NDIAELRNLEERRYAAMLAGDADVLEELLHDDLAYMHSTGELESKQSYIDTLRAGTSAYKMIRVDDQKIRIHADIGMVFHHLEADVVFQGNERHLDNRLLAVWSRDAGKWRMLGLQSGPV 375 N++ E+R E+RRYAA + + +VL+EL HD L YMHS+G +SK SY+D +R G Y + +I I D+ +VF L + G+ R D R LAVW R +WR+L + SG + Sbjct: 2 NELDEIRACEDRRYAAAVEKNIEVLDELFHDRLIYMHSSGVTDSKTSYLDGIREGVWDYHGTERSEPRIVISGDVALVFADLSIRMTTCGDYRAFDTRALAVWQRCDDRWRLLSVHSGAI 121
BLAST of mRNA_D-mesarthrocarpus_Contig10021.2.1 vs. uniprot
Match: A0A1G5A3T9_9BURK (Ketosteroid isomerase homolog n=1 Tax=Variovorax sp. EL159 TaxID=1566270 RepID=A0A1G5A3T9_9BURK) HSP 1 Score: 94.4 bits (233), Expect = 2.370e-22 Identity = 47/123 (38.21%), Postives = 75/123 (60.98%), Query Frame = 1 Query: 1 MSKHDNDIAELRNLEERRYAAMLAGDADVLEELLHDDLAYMHSTGELESKQSYIDTLRAGTSAYKMIRVDDQKIRIHADIGMVFHHLEADVVFQGNERHLDNRLLAVWSRDAGKWRMLGLQSG 369 M+++D I +R L++ RYAAM+A D D LE+LL D L YMHS+G ++K +YI+ L G Y I ++ + +I D+ ++F L + +G + + LAVW + +G WR+L +QSG Sbjct: 1 MTRNDETIERIRQLDDERYAAMVAKDVDSLEKLLDDKLIYMHSSGVADTKATYIEGLSTGVWDYHGIDREELRHQIDGDVALMFSRLFIRMTNRGTYKEFGSHALAVWVKKSGIWRLLAVQSG 123
BLAST of mRNA_D-mesarthrocarpus_Contig10021.2.1 vs. uniprot
Match: A0A2Z5G022_9BACT (DUF4440 domain-containing protein n=2 Tax=Acidisarcina polymorpha TaxID=2211140 RepID=A0A2Z5G022_9BACT) HSP 1 Score: 92.8 bits (229), Expect = 9.250e-22 Identity = 45/119 (37.82%), Postives = 71/119 (59.66%), Query Frame = 1 Query: 13 DNDIAELRNLEERRYAAMLAGDADVLEELLHDDLAYMHSTGELESKQSYIDTLRAGTSAYKMIRVDDQKIRIHADIGMVFHHLEADVVFQGNERHLDNRLLAVWSRDAGKWRMLGLQSG 369 +N+++E+ LE+RRYAAML+ D + LEELLH+ L ++HSTG +K +Y+ LR Y I Q I + +VF+HL + +G L N+ L+VW + G W+++ + SG Sbjct: 4 ENNMSEIERLEDRRYAAMLSRDVETLEELLHERLLHVHSTGNQHTKAAYLVGLRERAWEYHQIDRSQQNIIVQGSTALVFNHLFLRLELKGKAIELRNQALSVWIHEQGVWQLIAMHSG 122 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10021.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10021.2.1 >prot_D-mesarthrocarpus_Contig10021.2.1 ID=prot_D-mesarthrocarpus_Contig10021.2.1|Name=mRNA_D-mesarthrocarpus_Contig10021.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=128bp MSKHDNDIAELRNLEERRYAAMLAGDADVLEELLHDDLAYMHSTGELESKback to top mRNA from alignment at D-mesarthrocarpus_Contig10021:1560..1943- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10021.2.1 ID=mRNA_D-mesarthrocarpus_Contig10021.2.1|Name=mRNA_D-mesarthrocarpus_Contig10021.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=384bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10021:1560..1943- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10021:1560..1943- >mRNA_D-mesarthrocarpus_Contig10021.2.1 ID=mRNA_D-mesarthrocarpus_Contig10021.2.1|Name=mRNA_D-mesarthrocarpus_Contig10021.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=384bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10021:1560..1943- (Discosporangium mesarthrocarpum MT17_79)back to top |