mRNA_D-mesarthrocarpus_Contig10019.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10019.1.1 vs. uniprot
Match: D7FTC4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTC4_ECTSI) HSP 1 Score: 330 bits (847), Expect = 4.360e-107 Identity = 165/230 (71.74%), Postives = 198/230 (86.09%), Query Frame = 1 Query: 1 QVSSKELTPVFVTLATDSSKIVRTGALQHLGPLISTLPGDAVTEDLVQYFTSTAIEHSGDPGADADLRLYCAFSFPAVVLTLGAGRWGLLREAFESLVRDHNWCVRKTLSHSLHEVAKVLKTQDVEEDLIPCMEAFLRDVEEVRLGVMKHLAQLFEHMSPPTREQHLGLLAEILQTTSPFNWRLRELLAGQLPDLAPLLSPDVVFSMVVPVAFTLLNDAVSIVRERTFEV 690 +VS +ELTPVF++LA+DSSK+VRTGALQHLG LISTLPG++V+EDLV+YFT TA+E GDP ADA+LRLYCAFSFPAVV+T+G RW LRE+F +L+RD +W VRKTLS SLHE+AKVLK DVE DL+P MEAFLRD+E+VRLGV++HLA F+ M+P RE+HL +L EILQTTSPFNWRLRE+LA QLP LAPLL+PD VF VVPVAF LLND V++VRE+TFEV Sbjct: 255 EVSLRELTPVFLSLASDSSKLVRTGALQHLGRLISTLPGESVSEDLVRYFTGTAVESMGDPVADAELRLYCAFSFPAVVVTIGPDRWHELRESFAALIRDPSWSVRKTLSFSLHEIAKVLKADDVEGDLVPAMEAFLRDMEDVRLGVIRHLADFFQEMTPQQREKHLNVLVEILQTTSPFNWRLREVLAQQLPRLAPLLTPDSVFFAVVPVAFGLLNDPVAVVREKTFEV 484
BLAST of mRNA_D-mesarthrocarpus_Contig10019.1.1 vs. uniprot
Match: A0A7S1CBG0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBG0_9STRA) HSP 1 Score: 190 bits (483), Expect = 1.530e-52 Identity = 105/215 (48.84%), Postives = 140/215 (65.12%), Query Frame = 1 Query: 70 TGALQHLGPLISTLPGDAVTEDLVQYFTSTAIEHS-----------GDPGADADLRLYCAFSFPAVVLTLGAGRWGLLREAFESLVRDHNWCVRKTLSHSLHEVAKVLKTQDVEEDLIPCMEAFLRDVEEVRLGVMKHLAQLFEHMSPPTREQHLGLLAEILQTTSPFNWRLRELLAGQLPDLAPLLSPDVVFSMVVPVAFTLLNDAVSIVRERT 681 T A QHLGP +ST+PG++++++L+ +FT A + GDPG D DL LYCAFSFPAV LTLG RW LR F +L RD VR+TLSHSLHEVA++L + E++L+ E FLRD++EV++GV++H+A+ + + P TRE +L +L EI TSP NWR R LLA QL L L S FS+V P+A +LL D V VR+ T Sbjct: 277 TAAYQHLGPFLSTIPGESISKELLVHFTGMAYAGTNGGGTTGNVGGGDPG-DGDLSLYCAFSFPAVALTLGPDRWPELRALFLALSRDVQRKVRRTLSHSLHEVARILGPKLAEKELLSTFEFFLRDLDEVKVGVIRHVAEFLDALEPATRESYLPVLQEIQNCTSPLNWRFRFLLAEQLTRLTQLFSSAATFSVVAPLATSLLQDPVGNVRDVT 490
BLAST of mRNA_D-mesarthrocarpus_Contig10019.1.1 vs. uniprot
Match: A0A482R7U9_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482R7U9_9ARCH) HSP 1 Score: 184 bits (466), Expect = 7.780e-51 Identity = 100/248 (40.32%), Postives = 140/248 (56.45%), Query Frame = 1 Query: 16 ELTPVFVTLATDSSKIVRTGALQHLGPLISTLPGDAVTEDLVQYFTSTAIEHSGDPGA----------------------------DADLRLYCAFSFPAVVLTLGAGRWGLLREAFESLVRDHNWCVRKTLSHSLHEVAKVLKTQDVEEDLIPCMEAFLRDVEEVRLGVMKHLAQLFEHMSPPTREQHLGLLAEILQTTSPFNWRLRELLAGQLPDLAPLLSPDVVFSMVVPVAFTLLNDAVSIVRE 675 EL PV D+SK VR A QHLGP ++TLPG +T L+ ++ + P A D DL YCAFSFPAVVLTLG RW LR F+SL RD VR+ ++HSLHE+A++L + E +L+ +LRDV+EV++GV+++L ++P TRE L +L E+L +P NWR R+LLA QLP ++ + SP +++V P A+ LLND V+ VR+ Sbjct: 62 ELVPVLNRFVVDTSKYVRNAAYQHLGPFLATLPGPKITTPLLMHYVRMGLSADASPSALALENASSTAAAAANTAALTARMGNDPSDVDLSAYCAFSFPAVVLTLGRARWPELRPLFQSLWRDVKRKVRRPIAHSLHEIARILGPELAESELLTVFTLYLRDVDEVKVGVLRNLVAFLAALTPSTRESFLPVLDEVLSGVAPLNWRFRKLLAAQLPAMSHIFSPAATYAVVRPFAWKLLNDPVASVRD 309
BLAST of mRNA_D-mesarthrocarpus_Contig10019.1.1 vs. uniprot
Match: A0A836CCL0_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCL0_9STRA) HSP 1 Score: 181 bits (458), Expect = 2.760e-49 Identity = 100/185 (54.05%), Postives = 124/185 (67.03%), Query Frame = 1 Query: 193 ADLRLYCAF--------------SFPAVVLTLGAGRWGLLREAFESLVRDHNWCVRKTLSHSLHEVAKVLKTQDVEEDLIPCMEAFLRDVEEVRLGVMKHLAQLFEHMSPPTREQHLGLLAE---------ILQTTSPFNWRLRELLAGQLPDLAPLLSPDVVFSMVVPVAFTLLNDAVSIVRER 678 A+LRLYCAF SFPAVV+TLG RW LREA++ L RD W VRKTL+HSLHE+AKVL T VEEDL+P +E FL DVEEVR+GV+ L+ +F +SP RE+HL LL + +L+++S FNWRLR+LLAGQLP L L SPD S ++P+ LL+D VS VRER Sbjct: 226 AELRLYCAFRYCTGGXXXXXXXXSFPAVVVTLGGARWPELREAYQCLTRDREWNVRKTLAHSLHEIAKVLGTAQVEEDLLPELEFFLSDVEEVRVGVVCRLSAVFATLSPACRERHLPLLTQASSNLRLPLVLESSSAFNWRLRDLLAGQLPQLIALFSPDSAHSTLLPLTLKLLDDPVSAVRER 410
BLAST of mRNA_D-mesarthrocarpus_Contig10019.1.1 vs. uniprot
Match: A0A7S1BJJ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BJJ9_9STRA) HSP 1 Score: 166 bits (421), Expect = 7.810e-47 Identity = 102/258 (39.53%), Postives = 146/258 (56.59%), Query Frame = 1 Query: 19 LTPVFVTLATDSSKIVRTGALQHLGPLISTL-----------------------------------PGDAVTEDLVQYFTSTAIEHSGDPGADADLRLYCAFSFPAVVLTLGAGRWGLLREAFESLVRDHNWCVRKTLSHSLHEVAKVLKTQDVEEDLIPCMEAFLRD-VEEVRLGVMKHLAQLFEHMSPPTREQHLGLLAEILQTTSPFNWRLRELLAGQLPDLAPLLSPDVVFSMVVPVAFTLLNDAVSIVRERTF 684 L PV + L D+S++VR ALQHLGPLIST+ P + +T DLV ++ + + + +GD DADLRL+CAFSFPAV LT+G WGLLRE + +L RD VR+ ++ S+HEVA++L VE +L+ E + D VE VR+G +++L + + R +++ LL EI +SP NWRLR+ +A QLP++ L V S + P+AF+LL+DAVS VR F Sbjct: 66 LGPVMMKLLGDTSRLVRQSALQHLGPLISTIEISSTSADATDKIAKEENSDTSCLKNLPPISSSPFPSELIT-DLVSHYVAMSSDETGDVAIDADLRLHCAFSFPAVFLTVGKNGWGLLRECYINLSRDEITAVRRCMACSVHEVARILGPVLVESELLGIFEGMVHDSVEAVRIGAVRNLNKFLAILPRKIRVRYIPLLREIFVESSPMNWRLRDHVARQLPEITRLFDVGAVASDLAPLAFSLLDDAVSEVRASAF 322
BLAST of mRNA_D-mesarthrocarpus_Contig10019.1.1 vs. uniprot
Match: UPI0006450659 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006450659) HSP 1 Score: 166 bits (420), Expect = 6.360e-44 Identity = 88/208 (42.31%), Postives = 130/208 (62.50%), Query Frame = 1 Query: 49 DSSKIVRTGALQHLGPLISTLPGDAVTEDLVQYFTSTAIEHSGDPGADADLRLYCAFSFPAVVLTLGAGRWGLLREAFESLVRDHNWCVRKTLSHSLHEVAKVLKTQDVEEDLIPCMEAFLRDVEEVRLGVMKHLAQLFEHMSPPTREQHLGLLAEILQTTSPFNWRLRELLAGQLPDLAPLLSPDVVFSMVVPVAFTLLNDAVSIVR 672 D S+ V A Q+LGP I+T G VT L++YFT I S + D+DL +CAF+FPAV+ T+G+ RW L E + SLV D NW VR++LSHSLHE+AK+L + + L+ FL+D++EV++GV++H AQ E + P RE ++ +L + + P WR R+L++ QL ++ L S + + P+ TLLND+VS VR Sbjct: 295 DPSRWVNNTAFQNLGPFIATFDGSQVTPKLLKYFTEM-ISPSSNRFPDSDLVTHCAFNFPAVLYTVGSSRWSELSETYFSLVNDTNWKVRRSLSHSLHEIAKILGPAETKSSLLNTFNLFLQDLDEVKVGVVRHFAQFLESVEPSLRENYIQILNGFV--SDPSKWRFRKLISKQLGNICDLFSLKTTLTNIAPLIITLLNDSVSKVR 499
BLAST of mRNA_D-mesarthrocarpus_Contig10019.1.1 vs. uniprot
Match: A0A7S0QD95_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QD95_9CRYP) HSP 1 Score: 159 bits (402), Expect = 1.340e-43 Identity = 83/211 (39.34%), Postives = 132/211 (62.56%), Query Frame = 1 Query: 40 LATDSSKIVRTGALQHLGPLISTLPGDAVTEDLVQYFTSTAIEHSGDPGADADLRLYCAFSFPAVVLTLGAGRWGLLREAFESLVRDHNWCVRKTLSHSLHEVAKVLKTQDVEEDLIPCMEAFLRDVEEVRLGVMKHLAQLFEHMSPPTREQHLGLLAEILQTTSPFNWRLRELLAGQLPDLAPLLSPDVVFSMVVPVAFTLLNDAVSIVR 672 LATD S+ VR A Q+LGPLI+TL D +T L+QY++S A G+D ++ +CA++FPAV ++ G +W L EA+ L +D W VR+TL++S+HE+A +L ++ LIP ++AFL+D++EV++GV+++L++L + P R + L+ + + NWR R+LLA QL +L L DV+ + P+ L D V+ VR Sbjct: 2 LATDVSRWVRNSAFQYLGPLIATLANDEITPKLLQYYSSMASGKGSTGGSDNEMPAFCAYNFPAVAMSAGRDKWKHLEEAYRELQKDIQWKVRRTLAYSVHEMALILGPALAQQALIPAVDAFLKDLDEVKIGVIQNLSRLLAGLDPAGRAHFVSLICSLEMESD--NWRFRQLLATQLGELFELYEEDVIRKELYPIFIKLARDPVAEVR 210
BLAST of mRNA_D-mesarthrocarpus_Contig10019.1.1 vs. uniprot
Match: A0A8J4PYU0_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PYU0_9MYCE) HSP 1 Score: 164 bits (414), Expect = 2.890e-43 Identity = 84/211 (39.81%), Postives = 131/211 (62.09%), Query Frame = 1 Query: 40 LATDSSKIVRTGALQHLGPLISTLPGDAVTEDLVQYFTSTAIEHSGDPGADADLRLYCAFSFPAVVLTLGAGRWGLLREAFESLVRDHNWCVRKTLSHSLHEVAKVLKTQDVEEDLIPCMEAFLRDVEEVRLGVMKHLAQLFEHMSPPTREQHLGLLAEILQTTSPFNWRLRELLAGQLPDLAPLLSPDVVFSMVVPVAFTLLNDAVSIVR 672 ++ D+S+ V A Q+LGP IST G VT L++Y+T I S D+DL +CAF+FPAV+ T+G+ RW L++ + LV+D NW VR+TLSHS+HE+A +L + + L+PC FL+D++EVR+GV++H + + + P RE ++ L T P WR R+L++ Q+ ++ L S ++ + + P+ LLND VS VR Sbjct: 283 ISEDTSRWVNNTAFQNLGPFISTFEGSHVTPKLLKYYTDM-INPSTIKFPDSDLVTHCAFNFPAVLYTVGSARWPELKDTYLYLVKDPNWKVRRTLSHSIHEIASILGPAETKNSLLPCFNLFLQDLDEVRVGVIRHFGEFLKSLEPSLREGYISTLNTF--TNDPSKWRFRKLISKQIGEMCDLFSLKIILTELSPLLLLLLNDPVSKVR 490
BLAST of mRNA_D-mesarthrocarpus_Contig10019.1.1 vs. uniprot
Match: A0A2D4BPH0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BPH0_PYTIN) HSP 1 Score: 162 bits (411), Expect = 9.480e-43 Identity = 86/210 (40.95%), Postives = 130/210 (61.90%), Query Frame = 1 Query: 67 RTGALQHLGPLISTLPGDAVTEDLVQYF----TSTAIEHSGDPGADADLRLYCAFSFPAVVLTLGAGRWGLLREAFESLVRDHNWCVRKTLSHSLHEVAKVLKTQDVEEDLIPCMEAFLRDVEEVRLGVMKHLAQLFEHMSPPTREQHLGLLAEILQ--TTSPFNWRLRELLAGQLPDLAPLLSPDVVFSMVVPVAFTLLNDAVSIVRER 678 R A Q LGP +++L ++++L+Q++ TS+A G G + D++ +CAF+ PAVV LG W LL FE+L +D W +R+TL+HSLHE+A++L T+ E L +A+LRD+ +VR+G M H A E +SP RE +L +L+E+L+ TT WR RELL QLP L + S D F+ + P+ LL D V++VR++ Sbjct: 289 RMAAYQSLGPFLASLERKDISDELLQHYIGMATSSAAAQLGGSG-EVDMKFHCAFNLPAVVSILGRADWALLSPTFEALSQDSFWKIRRTLAHSLHELARILGTEIAETQLATAFDAYLRDIPDVRIGAMTHFADFLEXVSPSFRESYLPVLSELLRGLTTDSTKWRSRELLCHQLPQLCRIFSADATFTEIYPLVAQLLRDDVAVVRQQ 497
BLAST of mRNA_D-mesarthrocarpus_Contig10019.1.1 vs. uniprot
Match: F1A570_DICPU (Uncharacterized protein (Fragment) n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A570_DICPU) HSP 1 Score: 157 bits (398), Expect = 2.780e-42 Identity = 80/208 (38.46%), Postives = 127/208 (61.06%), Query Frame = 1 Query: 49 DSSKIVRTGALQHLGPLISTLPGDAVTEDLVQYFTSTAIEHSGDPGADADLRLYCAFSFPAVVLTLGAGRWGLLREAFESLVRDHNWCVRKTLSHSLHEVAKVLKTQDVEEDLIPCMEAFLRDVEEVRLGVMKHLAQLFEHMSPPTREQHLGLLAEILQTTSPFNWRLRELLAGQLPDLAPLLSPDVVFSMVVPVAFTLLNDAVSIVR 672 D S+ V A Q+LGP I+T G +T L+QY+T I S D+DL +CAF+FPAV+ T+GA RW L++ + SLV+D NW VR+TLSHS+HE+A +L + + L+PC FL+D++EVR+GV+++ Q + + R+ ++ + + P WR R+L++ Q+ ++ L + + + P+ TLLND V+ VR Sbjct: 238 DPSRWVNNTAFQNLGPFIATFEGSQITPKLLQYYTDM-INPSSIKFPDSDLVTHCAFNFPAVLYTVGASRWSELKDTYLSLVKDTNWKVRRTLSHSIHEIACILGPAETKASLLPCFNLFLQDLDEVRVGVIRNFGQFLKSLESTQRDSYIATIQVFVN--DPNKWRFRKLISKQIGEMCSLFNLKTNLTQLAPILITLLNDPVAKVR 442 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10019.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10019.1.1 >prot_D-mesarthrocarpus_Contig10019.1.1 ID=prot_D-mesarthrocarpus_Contig10019.1.1|Name=mRNA_D-mesarthrocarpus_Contig10019.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=230bp QVSSKELTPVFVTLATDSSKIVRTGALQHLGPLISTLPGDAVTEDLVQYFback to top mRNA from alignment at D-mesarthrocarpus_Contig10019:626..4346- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10019.1.1 ID=mRNA_D-mesarthrocarpus_Contig10019.1.1|Name=mRNA_D-mesarthrocarpus_Contig10019.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3721bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10019:626..4346- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10019:626..4346- >mRNA_D-mesarthrocarpus_Contig10019.1.1 ID=mRNA_D-mesarthrocarpus_Contig10019.1.1|Name=mRNA_D-mesarthrocarpus_Contig10019.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=690bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10019:626..4346- (Discosporangium mesarthrocarpum MT17_79)back to top |