mRNA_D-mesarthrocarpus_Contig10018.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10018.1.1 vs. uniprot
Match: A0A6H5KKD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKD6_9PHAE) HSP 1 Score: 229 bits (584), Expect = 5.240e-64 Identity = 135/380 (35.53%), Postives = 185/380 (48.68%), Query Frame = 1 Query: 4 RKLFCQERSRSVAARKKRLLTGEAWENRIDGISKLPFWYNRDTGEAIWDKPLVVLGRELYARALERLYGGMPLPLLVRVLSF--------------LTFQHDRMAASMVSSLWSEGANHDTFKKKVPHD--------------------------------------------------------------------------------------------QLEDGSFATLKKALEDSGPGDTIELGPGHHWEVRGDLLVDKVVKVVGDTRDPSRVVLELTGEVRWSATRGVIQGVTLRRPKPCPNSGPLVEVIRNGKLEMSACHLSNKNAGPRAPTLSVIGDRSLLFLDRCHCEGAPGSGVRALQGGIIAIGACEIKGS 825 R +F +ER+R+V+ RKKRLLTG+AWE R D +SK+PFWYNRDTGEAIWDKP VV RE +A+ALE Y G+P PLL++ + L + R AA++ L + +LE G + ++ AL + GDT+ LGPGHHWE DL DK V+++G+ DPSRV++E+TG VRW+A +G++ GV+LRRP+PCP+ GPL++V G L++SACH++NK AG +P L V S+LFL+RC + A G GV GG +A+ CEI GS Sbjct: 2430 RDMFSRERARAVSERKKRLLTGDAWELRPDAVSKMPFWYNRDTGEAIWDKPHVVAAREAHAKALEERYSGLPQPLLLKDVCSGGVPTMVGRGSSQDLQAEGVRDAAALAQKLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARLEPGQYKSIADALAAAEAGDTVVLGPGHHWEE--DLSSDKAVRILGEATDPSRVLVEMTGSVRWTAPKGLVVGVSLRRPRPCPDKGPLIKVDSGGNLQLSACHVNNKQAGEASPGLEVTDANSILFLERCRVQDARGDGVSCGPGGSVAVVGCEISGS 2807
BLAST of mRNA_D-mesarthrocarpus_Contig10018.1.1 vs. uniprot
Match: D7FTP0_ECTSI (Similar to E1a binding protein P400 (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTP0_ECTSI) HSP 1 Score: 204 bits (519), Expect = 2.470e-55 Identity = 113/284 (39.79%), Postives = 159/284 (55.99%), Query Frame = 1 Query: 4 RKLFCQERSRSVAARKKRLLTGEAWENRIDGISKLPFWYNRDTGEAIWDKPLVVLGRELYARALERLYGGMPLPLLVRVLSFLTFQHDRMAASMVSSLWSEGANHDTFKKKVPHDQLEDGSFATLKKALEDSGPGDTIELGPGHHWEVRG--------------DLLVDKVVKVVGDTRDPSRVVLELTGEVRWSATRGVIQGVTLRRPKPCPNSGPLVEVIRNGKLEMSACHLSNKNAGPRAPTLSVIGDRSLLFLDRCHCEGAPGSGVRALQGGIIAIGACE 813 R +F +ER+R+V+ RKKRLLTG+AWE R D +SK+PFWYNRDTG+ R ++R++ L L RV+ +L DRM A+ V W EGA H TFK +V + A L + L DL D+ V+++G+ DPSRV++E+TG VRW+A +G++ GV+LRRP+PCP+ GPL++V G L++SACH++NK AG +P L V S+LFL+RC + A G GV GG +A+ CE Sbjct: 2096 RDMFSRERARAVSERKKRLLTGDAWELRPDAVSKMPFWYNRDTGD-----------RTSFSRSIA-------LSRLQRVMRYLKATPDRMCAAEVCQPWLEGARHKTFKLRVLPVEAGVRDAAALAQKLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDLSSDRAVRILGEATDPSRVLVEMTGSVRWTAPKGLVVGVSLRRPRPCPDKGPLIKVDSGGNLQLSACHVNNKQAGEASPGLEVTDANSILFLERCRVQDARGDGVSCGPGGSVAVVGCE 2361
BLAST of mRNA_D-mesarthrocarpus_Contig10018.1.1 vs. uniprot
Match: A0A7S3V8R8_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V8R8_9STRA) HSP 1 Score: 176 bits (446), Expect = 1.280e-45 Identity = 99/298 (33.22%), Postives = 160/298 (53.69%), Query Frame = 1 Query: 4 RKLFCQERSRSVAARKKRLLTGEAWENRIDGISKLPFWYNRDTGEAIWDKPLVVLGRELYARALERLYGGMPLPLLVRVLSFLTFQHDRMAASMVSSLWSEGANHDTFKKKV----------PHDQLEDGSFATLKKALEDSGPGDTIELGPGHHWEVRGDLLVDKVVKVVGDTRDPSRVVLELTGEVRWSATRGVIQGVTLRRPKPCPNSGPLVEVIR---NGKLEMSACHLSNKNAGPRAPTLSVIGD-----RSLLFLDRCHCEGAPGSGVRALQGGIIAIGACEIKGSGQAGVE 843 R L+ +E+SR +A +K+R LTGE W +IDG SKLPFWYN DTGEAIW+KP V+ E Y RA ++ + +PL L ++ L +RM + V W + A +F + V +++ + T+ +AL++ PGDTIELG GH+W +L ++ ++++GD +DPS VV+EL+G V W+ +G ++GVT RRP+ + E+IR G++E + C + +LS + + L L+ G+GV + +++ I G+ V+ Sbjct: 1743 RHLYFREKSRLLANKKRRKLTGENWTTKIDGKSKLPFWYNSDTGEAIWEKPKVINELEEYERANQKQWNAVPLKSLFNMMEHLLPFPERMKCASVCKHWRKAAQDISFVRHVFPVEMGALSMDRAKMDHYHYRTIAEALQNCLPGDTIELGDGHYWVNESELSINFPLRIIGDEKDPSHVVIELSGTVAWNGDKGFVEGVTFRRPRMNLDEKKANELIRIGVGGRVEFAKCAVEGTREKVATASLSEFKECGFLVKGKLILNDSAISNVQGNGVECMNNSSVSLLGSRIVGNSGLAVQ 2040
BLAST of mRNA_D-mesarthrocarpus_Contig10018.1.1 vs. uniprot
Match: A0A7S2UQZ8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UQZ8_9STRA) HSP 1 Score: 169 bits (427), Expect = 2.380e-45 Identity = 110/316 (34.81%), Postives = 166/316 (52.53%), Query Frame = 1 Query: 4 RKLFCQERSRSVAARKKRLLTGEAWENRIDGISKLPFWYNRDTGEAIWDKPLVVLGRELYARALERLYGGMPLPLLVRVLSFLTFQHDRMAASMVSSLWSEGANHDTFKKKV-PHDQ----LEDGS-----FATLKKALEDSGPGDTIELGPGHHWEVRGDLLVDKVVKVVGDTRDPSRVVLELTGEVRW-SATRGVIQGVTLRRPKPCPN---SGPLVEVIRNGKLEMSACHLSN------------KNAGPRAPTLSVIGDRSL-----------LFLDRCHCEGAPGSGVRALQGGIIAIGACEIKGSGQAGV 840 ++L+ +E+SR A +K+R LTGE W ++DG+S+LPFWYN DTGEAIW+KP V+ + ALE+ + MPL L R++ FL DR+ S V W A +F K V P + LED + ++ AL + PGDTIE GH+W + VD ++ VG DP++VV+EL+G + W A G ++G+T+RRPK + S +++V + GKL+M C L N K + R +++ G S L L C G+G++ + G +I I EI+ +G G+ Sbjct: 18 KQLYIREKSRLRANKKRRRLTGENWVTKVDGVSQLPFWYNEDTGEAIWEKPAVLNELASHETALEKKWIAMPLEPLRRIMQFLLPYPDRVQCSTVCKHWKAAATDISFVKHVIPVEMGALALEDSKLFHNHYRSIADALTVALPGDTIEFADGHYWVKEPGIKVDFPLRFVGHETDPTQVVIELSGVIDWHGAGGGWMEGITIRRPKIAASESSSHDILQVQKGGKLDMVHCVLDNGGCSGSVVRVRDKGSHCRWDDVAIRGSGSAEGAVVLDSEGDLELSECRITDNQGNGIKCMGGSVIRIEKSEIERNGGIGL 333
BLAST of mRNA_D-mesarthrocarpus_Contig10018.1.1 vs. uniprot
Match: A0A7S4NI31_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NI31_9STRA) HSP 1 Score: 174 bits (442), Expect = 4.080e-45 Identity = 97/236 (41.10%), Postives = 138/236 (58.47%), Query Frame = 1 Query: 4 RKLFCQERSRSVAARKKRLLTGEAWENRIDGISKLPFWYNRDTGEAIWDKPLVVLGRELYARALERLYGGMPLPLLVRVLSFLTFQHDRMAASMVSSLWSEGANHDTFKKKV----------PHDQLEDGSFATLKKALEDSGPGDTIELGPGHHWEVRGDLLVDKVVKVVGDTRDPSRVVLELTGEVRWSATRGVIQGVTLRRPKPCPNSGPLVE---VIRNGKLEMSACHLSNK 672 R+LF +E+SR A + +R LTGE WE RID +SK PFW+N DTGEA WDKPLV+LG E A A E+ + + + LV V+ +L DRM S V W A +F K V D+L + T+ +AL ++ PGDTIELG GH+W L + ++++GD DPS VV+EL+G + + + G ++GVTLRRP+ ++ E V+ GK +M+ C L N+ Sbjct: 1067 RQLFAREKSRLRAEKLRRKLTGENWETRIDALSKSPFWFNTDTGEARWDKPLVLLGLEADALAHEKKWNALSMKPLVHVMEYLVPFPDRMRCSAVCRQWRSAATDISFVKHVFPVEMGALALDPDKLGQNHYRTMAEALGEALPGDTIELGDGHYWVNDPGLHIKTPLRLIGDENDPSHVVIELSGSIDFDSVCGWMEGVTLRRPRIVSDTKQSCESLRVLNGGKFDMAHCVLDNE 1302
BLAST of mRNA_D-mesarthrocarpus_Contig10018.1.1 vs. uniprot
Match: A0A7S1FSH4_9STRA (Hypothetical protein n=4 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FSH4_9STRA) HSP 1 Score: 166 bits (419), Expect = 2.060e-42 Identity = 102/317 (32.18%), Postives = 159/317 (50.16%), Query Frame = 1 Query: 1 HRKLFCQERSRSVAARKKRLLTGEAWENRIDGISKLPFWYNRDTGEAIWDKPLVVLGRELYARALERLYGGMPLPLLVRVLSFLTFQHDRMAASMVSSLWSEGANHDTFKKKV-PHD--------QLEDGSFATLKKALEDSGPGDTIELGPGHHWEVRGDLLVDKVVKVVGDTRDPSRVVLELTGEVRWSATRGVIQGVTLRRPKPCPNSGPLVEVIRNGKLEMSACHLSNKNAGPRAPTLSV--------------------------IGDRSLLFLDRCHCEGAPGSGVRALQGGIIAIGACEIKGSGQAGVEI 846 H +L+ E+ R A +K+R LTG+ WE IDG ++ PFW N DTGEAIWD P V+L E A + + + L+ ++ +L DR+ VS W+ A+H++F + V P + +L+ + T+ +A++D+ PGDT+ELG GH+W +R L +D +++VGD RDP+ VVLEL+G V W G I+GVT RRP+ + +++NG + H NAG L I D S L L +C +G+R+ ++ + C K + G+E+ Sbjct: 358 HCRLYACEKMRLKADKKRRRLTGKNWEVLIDGKTQKPFWQNSDTGEAIWDTPKVILELEAEKLARTHNWNALMMKPLLNIMGYLVPFPDRINCGKVSKQWATAAHHNSFVRHVYPVEMGPAIESLKLDAAHYRTIDEAMQDALPGDTLELGDGHYW-LRDGLAIDFPLRIVGDERDPTNVVLELSGSVEWRGGGGWIEGVTFRRPRVSILDQSSIFLLKNGSCNI--VHSIMNNAGSMGTVLKCHRSTLKMLDVTLRGEGSTRVSSCGVDIEDHSNLTLTKCRINNNSCTGLRSSYFSVVDLSECTFKRNSTFGLEL 671
BLAST of mRNA_D-mesarthrocarpus_Contig10018.1.1 vs. uniprot
Match: A0A7S4EMN4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EMN4_9STRA) HSP 1 Score: 157 bits (398), Expect = 2.890e-39 Identity = 90/258 (34.88%), Postives = 136/258 (52.71%), Query Frame = 1 Query: 4 RKLFCQERSRSVAARKKRLLTGEAWENRIDGISKLPFWYNRDTGEAIWDKPLVVLGRELYARALERLYGGMPLPLLVRVLSFLTFQHDRMAASMVSSLWSEG------------------ANHDTFKKKVPHDQLEDGSFATLKKALEDSGPGDTIELGPGHHWEVRGDLLVDKVVKVVGDTRDPSRVVLELTGEVRWSATRGVIQGVTLRRPKPCPN----SGPLVEVIRNGKLEMSACHLSNKNAGPRAPTLSVIG 711 R L+ +E+ R + + +R +TGE W ++DG++K PFWYN +TGEA WD PLVV A +G +P+ LL ++ FL +R S V W AN D K+ H AT++ AL ++ PGDTIELG GH+W ++VDK ++ VGD +P+ VV+E++G V+W+A G I+G+T RRPK S P++E+ G+++M H N G P +++ G Sbjct: 1099 RNLYRREKIRLRSEKLRRKITGELWSQKVDGLTKKPFWYNEETGEATWDTPLVVAELRAEDLAAREGWGHLPIKLLTHIMGFLFPFPERQRCSAVCRQWRIAVSDIRFVVHVYPAEMGALANRDPSKRHYNH-------HATIEDALANALPGDTIELGDGHYWVNDPGIIVDKPLRFVGDENNPANVVIEMSGSVQWTAKGGWIEGITFRRPKMSSGKTLPSFPMLEIGGAGRMDM--IHSVFDNDGSTGPVVNISG 1347
BLAST of mRNA_D-mesarthrocarpus_Contig10018.1.1 vs. uniprot
Match: K0RY45_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RY45_THAOC) HSP 1 Score: 123 bits (308), Expect = 2.050e-27 Identity = 83/263 (31.56%), Postives = 132/263 (50.19%), Query Frame = 1 Query: 4 RKLFCQERSRSVAARKKRLLTGEAWENRIDGISKLPFWYNRDTGEAIWDKPLVVLGRELYARALERLYGGMPLPLLVRVLSFLT-FQHDRMAASMVSSLWSEGANHDTFKKKVPHDQL----------EDGSFATLKKALEDSGPGDTIELGPGHHWEVRGDLLVDKVVKVVGDTRDPSRVVLELTGEVRWSATRGVIQGVTLRRPKPCPNS---GPLVEVIRNGKLEMSACHLSNKNAGPRAPTLSVIGDRSLLFLDRCHCE 750 R+L+ +E++R + R LTG W +++ SK +WYN DTGEA+W KP V++ E A + +P +L+ + +L F AA+ W AN +F V +L + F T+ +A+E + PGDTIE+G G+++ V+ L+VDK VK+VGD D +V LE+ G + W A G ++G+TL RP ++ V N +L+M C + N ++G+ + RCH E Sbjct: 689 RQLYIREKARLRSEIMIRKLTGRNWTTKVEDRSKRVYWYNTDTGEALWGKPQVLIDLEAEENARANGWSALPPNILIDIFDYLVPFPERTAAAAGTCRGWRLAANDPSFVLHVWPVELGALIMNESKSKKKQFRTVAEAVESALPGDTIEMGDGNYY-VKSGLVVDKPVKLVGD-EDNLKVNLEVGGTIEWRARGGYLEGLTLHRPSMVSGKTEQNDMLAVAPNCRLDMFRCVVDNAGG---IGNCVLVGEGA-----RCHSE 941
BLAST of mRNA_D-mesarthrocarpus_Contig10018.1.1 vs. uniprot
Match: W4GAH8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GAH8_9STRA) HSP 1 Score: 118 bits (295), Expect = 1.200e-25 Identity = 105/331 (31.72%), Postives = 165/331 (49.85%), Query Frame = 1 Query: 4 RKLFCQERSRSVAARKKRLLTGEAWENRIDGISKLPFWYNRDTGEAIWDKPLVVLGRELYARALERLYGGMPLPLLVRVLSFLTFQHDRMAASMVSSLWSEGANHDTFKKKVPHDQLEDGSFATLKKALEDSGPGDTIELGPGHHWEVRGDLLVDKVVKVVGD--TRDPSRV-----VLELTGEVRWSATRGVIQGVTLRRPKPCPNSGPLVEVIRNGKLEMSACH----LSNKNAGPRAPTLSVIGDRSLLFLDRCHCEGAPGSGVRALQGGIIAIGACEIKGSGQAGVEIGPGAEAVVNDSYIFWNTGAGVVAAGGGAVSLVHNDCSHN 963 ++L+ +ERS + +++R LTG AW + S LPF+YN DT EAIWD+PLV + + +A A+ YGG+ +P L+ +L F T + DRMA S V+ W+ A H +F K+V H + +L ALE DT+ G G H + + + V+ G TR + V E++G V W A G I +T++ P + + RN L +++ L ++ G G +L+ +D A GSGV +QGG +AI AC + G G+ G+ + GA +V S+ N GV GG ++++ + N Sbjct: 1363 KRLYVRERSHVKSEKRRRALTGAAWMPKTCSRSNLPFYYNTDTHEAIWDRPLVWVTNDEHAHAVTVGYGGLSIPTLLHLLGFATAK-DRMA-SCVNKQWTVAARHPSFHKRV-HSTDSVAAVQSLLSALEAC---DTVAFGSGVH-SMPTAVHIRCPVRFTGPPLTRGSTCTLEFSPVNEMSGLV-WHAKAGEISNLTVQIPTSSSSPNMSTKSRRNVVLTVASDSNLTVLDSRILGGDVAVAVQGGTATLVDVDIAD---AVGSGV-VVQGGFVAIVACRVSGHGRCGLAMVHGA-GIVRRSWFALNGRYGVRLLGGVQMAMLDTNSFEN 1680
BLAST of mRNA_D-mesarthrocarpus_Contig10018.1.1 vs. uniprot
Match: A0A7S2VEB1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VEB1_9STRA) HSP 1 Score: 115 bits (288), Expect = 8.020e-25 Identity = 65/157 (41.40%), Postives = 90/157 (57.32%), Query Frame = 1 Query: 4 RKLFCQERSRSVAARKKRLLTGEAWENRIDGISKLPFWYNRDTGEAIWDKPLVVLGRELYARALERLYGGMPLPLLVRVLSFLTFQHDR-MAASMVSSLWSEGANHDTFKKKV----------PHDQLEDGSFATLKKALEDSGPGDTIELGPGHHW 441 R L+ +E SR AA+K+R LTGE WE R+D FWYN DTGEAIWDKP ++L E Y A ER + +P+ LV ++SFL +R + A+ V W + A+ +F V ++E + TL A++ + PGDTIELG GH+W Sbjct: 633 RNLYQREHSRVKAAKKRRALTGENWETRVDARIHKNFWYNVDTGEAIWDKPRLLLELEEYQIADERKWSALPIHPLVHIMSFLQPHPERALGAAAVCQQWRQAASDPSFVIHVYPVEMGAYTRDEKKMEYNHYRTLPAAIQAAQPGDTIELGDGHYW 789 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10018.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10018.1.1 >prot_D-mesarthrocarpus_Contig10018.1.1 ID=prot_D-mesarthrocarpus_Contig10018.1.1|Name=mRNA_D-mesarthrocarpus_Contig10018.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=324bp HRKLFCQERSRSVAARKKRLLTGEAWENRIDGISKLPFWYNRDTGEAIWDback to top mRNA from alignment at D-mesarthrocarpus_Contig10018:49..2942- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10018.1.1 ID=mRNA_D-mesarthrocarpus_Contig10018.1.1|Name=mRNA_D-mesarthrocarpus_Contig10018.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2894bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10018:49..2942- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10018:49..2942- >mRNA_D-mesarthrocarpus_Contig10018.1.1 ID=mRNA_D-mesarthrocarpus_Contig10018.1.1|Name=mRNA_D-mesarthrocarpus_Contig10018.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=972bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10018:49..2942- (Discosporangium mesarthrocarpum MT17_79)back to top |