mRNA_D-mesarthrocarpus_Contig10009.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10009.2.1 vs. uniprot
Match: D8LB97_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB97_ECTSI) HSP 1 Score: 152 bits (383), Expect = 4.720e-43 Identity = 74/92 (80.43%), Postives = 85/92 (92.39%), Query Frame = 1 Query: 1 MSRVYVGNLPMDVTEKDLEDVFYKYGKIYDIDLKTPARPPAFGFVTFEDSRDAEEAVRARDGYEMDGSRLRVEISRGRRDRGDFGMGYGMRG 276 M+R+Y+GNLPMDVTEKD++DVFYK+G+I DIDLKTPARPPAFGF+TF+D+RDAEEAVRARDGY+MDGSRLRVEISRGRRD FGMG G G Sbjct: 1 MARIYIGNLPMDVTEKDMDDVFYKFGRIVDIDLKTPARPPAFGFITFQDARDAEEAVRARDGYDMDGSRLRVEISRGRRD--PFGMGGGGHG 90
BLAST of mRNA_D-mesarthrocarpus_Contig10009.2.1 vs. uniprot
Match: D8LPT5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPT5_ECTSI) HSP 1 Score: 137 bits (344), Expect = 2.140e-37 Identity = 67/89 (75.28%), Postives = 78/89 (87.64%), Query Frame = 1 Query: 1 MSRVYVGNLPMDVTEKDLEDVFYKYGKIYDIDLKTPARPPAFGFVTFEDSRDAEEAVRARDGYEMDGSRLRVEISRGRRDRGDFGMGYG 267 MSR+Y+GNLPMD+ EKDLED+FYKYGKI D+ LK P RPPAFGFVTFEDSRDA+EAVRARDGY+ DG RLRVE+SRG+R+ FG G+G Sbjct: 53 MSRLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRARDGYDFDGYRLRVEMSRGKRE---FGGGFG 138
BLAST of mRNA_D-mesarthrocarpus_Contig10009.2.1 vs. uniprot
Match: A0A6H5KN34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN34_9PHAE) HSP 1 Score: 135 bits (339), Expect = 4.050e-36 Identity = 66/89 (74.16%), Postives = 77/89 (86.52%), Query Frame = 1 Query: 1 MSRVYVGNLPMDVTEKDLEDVFYKYGKIYDIDLKTPARPPAFGFVTFEDSRDAEEAVRARDGYEMDGSRLRVEISRGRRDRGDFGMGYG 267 MSR+Y+GNLPMD+ EKDLED+FYKYGKI D+ LK P RPPAFGFVTFED RDA+EAVRARDGY+ DG RLRVE+SRG+R+ FG G+G Sbjct: 61 MSRLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDPRDADEAVRARDGYDFDGYRLRVEMSRGKRE---FGGGFG 146
BLAST of mRNA_D-mesarthrocarpus_Contig10009.2.1 vs. uniprot
Match: A0A836CC30_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC30_9STRA) HSP 1 Score: 132 bits (332), Expect = 2.460e-35 Identity = 63/82 (76.83%), Postives = 73/82 (89.02%), Query Frame = 1 Query: 1 MSRVYVGNLPMDVTEKDLEDVFYKYGKIYDIDLKTPARPPAFGFVTFEDSRDAEEAVRARDGYEMDGSRLRVEISRGRRDRG 246 M+RVYVGNLPM+V EKD+ED+FYKYG+I DIDLKTPARPP+F FV FED RDAE+AV RDGYEMDG RLRVE++RG R+RG Sbjct: 1 MARVYVGNLPMNVREKDVEDLFYKYGRIRDIDLKTPARPPSFAFVAFEDVRDAEDAVSGRDGYEMDGQRLRVELARGARERG 82
BLAST of mRNA_D-mesarthrocarpus_Contig10009.2.1 vs. uniprot
Match: A0A835YQ88_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ88_9STRA) HSP 1 Score: 130 bits (326), Expect = 5.390e-35 Identity = 62/79 (78.48%), Postives = 72/79 (91.14%), Query Frame = 1 Query: 1 MSRVYVGNLPMDVTEKDLEDVFYKYGKIYDIDLKTPARPPAFGFVTFEDSRDAEEAVRARDGYEMDGSRLRVEISRGRR 237 M+RVYVGNLPM+V EKD+ED+FYK+G+I DIDLKTPARPPAF FV F+D RDAE+AVRARDGYEMDG RLRVE++RG R Sbjct: 1 MARVYVGNLPMNVREKDVEDLFYKFGRIRDIDLKTPARPPAFAFVAFDDVRDAEDAVRARDGYEMDGERLRVELARGAR 79
BLAST of mRNA_D-mesarthrocarpus_Contig10009.2.1 vs. uniprot
Match: A0A7S3UTA7_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTA7_HETAK) HSP 1 Score: 119 bits (299), Expect = 2.540e-32 Identity = 55/82 (67.07%), Postives = 70/82 (85.37%), Query Frame = 1 Query: 1 MSRVYVGNLPMDVTEKDLEDVFYKYGKIYDIDLKTPARPPAFGFVTFEDSRDAEEAVRARDGYEMDGSRLRVEISRGRRDRG 246 MSR+Y+GNLP+D+TE+++ED+FYKYG+I I +K P+RPPAF FV FED+RDAE+AV RDGY+ DG R+RVEIS GR DRG Sbjct: 22 MSRIYIGNLPIDITEREIEDLFYKYGRIIQISVKNPSRPPAFAFVEFEDARDAEDAVYGRDGYDFDGERIRVEISHGR-DRG 102
BLAST of mRNA_D-mesarthrocarpus_Contig10009.2.1 vs. uniprot
Match: A0A7S2B3I3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B3I3_9STRA) HSP 1 Score: 118 bits (296), Expect = 3.330e-32 Identity = 53/77 (68.83%), Postives = 67/77 (87.01%), Query Frame = 1 Query: 7 RVYVGNLPMDVTEKDLEDVFYKYGKIYDIDLKTPARPPAFGFVTFEDSRDAEEAVRARDGYEMDGSRLRVEISRGRR 237 R++VGNLPMD+ E+D+ED+FYKYG++ DI LKTP+RPPAF F+TF+D RDA++AVR RDGY + G RLRVEI RGRR Sbjct: 8 RIFVGNLPMDIRERDIEDLFYKYGRMSDIHLKTPSRPPAFAFITFDDRRDADDAVRGRDGYSLGGERLRVEIVRGRR 84
BLAST of mRNA_D-mesarthrocarpus_Contig10009.2.1 vs. uniprot
Match: T0QQQ1_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QQQ1_SAPDV) HSP 1 Score: 116 bits (291), Expect = 5.630e-31 Identity = 54/82 (65.85%), Postives = 69/82 (84.15%), Query Frame = 1 Query: 7 RVYVGNLPMDVTEKDLEDVFYKYGKIYDIDLKTPARPPAFGFVTFEDSRDAEEAVRARDGYEMDGSRLRVEISRGR-RDRGD 249 R+YVGNLPMDV ++++D+FYKYG+I DID+K P+RPPAF FV FED RDA++A+R RDGY DG+RLRVE ++G RDRGD Sbjct: 4 RIYVGNLPMDVRTREIDDLFYKYGRIVDIDIKLPSRPPAFAFVEFEDERDADDAIRGRDGYRFDGARLRVEPTKGGYRDRGD 85
BLAST of mRNA_D-mesarthrocarpus_Contig10009.2.1 vs. uniprot
Match: A0A6A3MJN0_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MJN0_9STRA) HSP 1 Score: 120 bits (301), Expect = 5.720e-31 Identity = 60/89 (67.42%), Postives = 74/89 (83.15%), Query Frame = 1 Query: 1 MSRVYVGNLPMDVTEKDLEDVFYKYGKIYDIDLKTPARPPAFGFVTFEDSRDAEEAVRARDGYEMDGSRLRVEISRG-RRDRG-DFGMG 261 MSRVYVGNLPMD+ +++ED+FYKYG+I DID+K P+RPPAF FV FED+RDAE+A+R RDGY+ DG+RLRVE + G RRD G D G G Sbjct: 1 MSRVYVGNLPMDIRTREVEDIFYKYGRIRDIDVKFPSRPPAFAFVDFEDARDAEDAIRGRDGYDYDGARLRVEPANGGRRDSGRDAGRG 89
BLAST of mRNA_D-mesarthrocarpus_Contig10009.2.1 vs. uniprot
Match: A0A3L6UTM2_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6UTM2_9STRA) HSP 1 Score: 115 bits (289), Expect = 1.040e-30 Identity = 60/98 (61.22%), Postives = 74/98 (75.51%), Query Frame = 1 Query: 4 SRVYVGNLPMDVTEKDLEDVFYKYGKIYDIDLKTPARPPAFGFVTFEDSRDAEEAVRARDGYEMDGSRLRVEIS------RGRRDRG-DFGMGYGMRG 276 +RVYVGNLPMDV ++L+D+FYKYG+I DID+K P+RPPAF FV FE SRDA++A+R RDGY+ DG RLRVE + RG RDRG D G G + G Sbjct: 3 TRVYVGNLPMDVRTRELDDLFYKYGRIRDIDIKQPSRPPAFAFVEFEHSRDADDAIRGRDGYQFDGQRLRVERTNGGGGGRGDRDRGGDKGFGRNLMG 100 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10009.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10009.2.1 >prot_D-mesarthrocarpus_Contig10009.2.1 ID=prot_D-mesarthrocarpus_Contig10009.2.1|Name=mRNA_D-mesarthrocarpus_Contig10009.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=106bp MSRVYVGNLPMDVTEKDLEDVFYKYGKIYDIDLKTPARPPAFGFVTFEDSback to top mRNA from alignment at D-mesarthrocarpus_Contig10009:2486..3271+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10009.2.1 ID=mRNA_D-mesarthrocarpus_Contig10009.2.1|Name=mRNA_D-mesarthrocarpus_Contig10009.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=786bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10009:2486..3271+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10009:2486..3271+ >mRNA_D-mesarthrocarpus_Contig10009.2.1 ID=mRNA_D-mesarthrocarpus_Contig10009.2.1|Name=mRNA_D-mesarthrocarpus_Contig10009.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=318bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10009:2486..3271+ (Discosporangium mesarthrocarpum MT17_79)back to top |