mRNA_D-mesarthrocarpus_Contig100.7.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig100.7.1 vs. uniprot
Match: D7FTS9_ECTSI (Endonuclease III homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTS9_ECTSI) HSP 1 Score: 280 bits (716), Expect = 9.820e-88 Identity = 145/286 (50.70%), Postives = 193/286 (67.48%), Query Frame = 3 Query: 195 RKRGRLFAEGVDNDTPIRPRGKLRTPTRQKIVYAKEPLVGWNTWKQQWDGVLQMRSSKSAPVDRAGSKSLKDSSEGSPAQVRFQVLLSGILSARTRDAVTAQAMGQIREACAPWAVSPTRLLEVG-GEECLEDLLYPVGFAKTKAKHILTVCRMLADGEEGREAGDIPSTVKGLRSLPGVGPKVAHLVMDIAWGDCIGICVDTHVHRVSNRLGWVNTWGRVR---QSPERTRRALEEWLPKKHWGEVNRLLVGFGQEICQPRKARCHSCVVQDICPSAGCQGDLSF 1040 R R L + + P P +R TR I EP W++Q +G+ +R S+ A VD AG+ +L+DSS GS VRFQVL+S +LS++T+D VTA + ++R+ACAP + LL G E+ L +LL+PV F KTKAKHIL VC+ LA+ E+GR+AG IP TV+GL LPGVGPK+ +LVMD+AWG GICVDTHVHR+SNRLGWV+TW R R Q+PE+TR+ L+ WLP++HW EVN LLVGFGQ++C + C +C + +CPSA GDL+ Sbjct: 6 RNRPGLSIMAANKNAPASP--PIRKTTR--IPIPTEPPQ--EKWREQMEGIRSVRRSRDAAVDFAGAGALRDSSAGSEDDVRFQVLMSAMLSSQTKDPVTAAGLNRMRQACAPAPLGAAALLATGMDEDALTELLHPVSFKKTKAKHILMVCKRLAEAEDGRQAGAIPDTVEGLLELPGVGPKMTYLVMDVAWGRNEGICVDTHVHRISNRLGWVDTWNRNRPKAQNPEKTRKHLQGWLPREHWSEVNELLVGFGQQVCFATRPSCSACGISGLCPSADRHGDLAL 285
BLAST of mRNA_D-mesarthrocarpus_Contig100.7.1 vs. uniprot
Match: A0A329RX62_9STRA (Endonuclease III homolog n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RX62_9STRA) HSP 1 Score: 226 bits (575), Expect = 2.500e-66 Identity = 133/308 (43.18%), Postives = 185/308 (60.06%), Query Frame = 3 Query: 120 VKRSLTA-FQAMRCPPPRKSPRRHLERKRGRLFA---EGVDNDTPIRPRGKLRTPTRQKI-VYAKEPLVGWNTWKQQWDGVLQMRSSKSAPVDRAGSKSLKDSSEGSPAQV-RFQVLLSGILSARTRDAVTAQAMGQIREACAPWAVSPTRLLEVGGEECLEDLLYPVGFAKTKAKHILTVCRMLADGEEGREAGDIPSTVKGLRSLPGVGPKVAHLVMDIAWGDCIGICVDTHVHRVSNRLGWVNTWGRVR---QSPERTRRALEEWLPKKHWGEVNRLLVGFGQEICQPRKARCHSCVVQDICPSA 1016 VK+ ++ +A P P + RRH R G + D P+ P+ K++ T +K V KEP + WK G+ QMR++ A VD+ G + D E P V RF VL++ ++S++T+D V A AMG++ + ++ +LE+ +E L L+ PVGF KAK+I +L EG++ DIPST +GL +LPGVGPK+A LVM+ AW + +GICVDTHVHR+SNRL WV TW + Q PE+TR LE+WLPK+HWG +N LLVGFGQ IC PR +C C ++ ICPSA Sbjct: 16 VKKPVSVKVEAEYLPSPHRQTRRHRRRDEGETLGMKRKKEDERAPLTPKKKVKKTTAKKERVPRKEP----SGWKDILHGIEQMRATMDAQVDKYGCEVFFD--ESFPPHVCRFHVLIAAMMSSQTKDPVNAAAMGRLIK----HGLTVESMLEINLQE-LAQLIRPVGFFNHKAKYIKQTASILTKQAEGKDVVDIPSTYEGLIALPGVGPKMATLVMNCAWKNTVGICVDTHVHRISNRLKWVKTWNKNNPKSQDPEKTRAELEDWLPKEHWGPINPLLVGFGQTICLPRGPKCSECKIRGICPSA 312
BLAST of mRNA_D-mesarthrocarpus_Contig100.7.1 vs. uniprot
Match: A0A024UFF1_9STRA (Endonuclease III homolog n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UFF1_9STRA) HSP 1 Score: 221 bits (563), Expect = 1.440e-63 Identity = 122/273 (44.69%), Postives = 168/273 (61.54%), Query Frame = 3 Query: 216 AEGVDNDTPIRPRGKLRTPTRQKIVYAKEPLVGW----NTWKQQWDGVLQMRSSKSAPVDRAGSKSLKDSSEGSPAQVRFQVLLSGILSARTRDAVTAQAMGQIREACAPWAVSPTRLLEVGGEECLEDLLYPVGFAKTKAKHILTVCRMLADGEEGREAGDIPSTVKGLRSLPGVGPKVAHLVMDIAWGDCIGICVDTHVHRVSNRLGWVNTWGRV--RQSPERTRRALEEWLPKKHWGEVNRLLVGFGQEICQPRKARCHSCVVQDICPSA 1016 A G+DN +R RG +K+V K+P +G N WK WDG++ MR+ KSA VD G ++ D + P + RF VL++ +LS++T+D VTA AM ++R ++ +L + + L LL PVGF KAK+I C +L + + DIPST L +LPGVGPK+AHL M AW + +GICVD HVHR+SNRLGW TW + Q PE+TR+ LE WLPK+HW ++N LLVGFGQ++C P + C SC V +CP+A Sbjct: 132 ALGLDNTEQVR-RGSNDDLDARKLV--KKPKLGKTKAPNNWKAIWDGIVGMRADKSAAVDAQGCETFNDPTLDPPVR-RFHVLVACMLSSQTKDPVTAAAMDRLRL----HGLTIASMLAIKQSD-LAALLRPVGFFNNKAKYIQQTCTIL----QTKYGSDIPSTYDELVALPGVGPKMAHLTMSCAWSNTVGICVDIHVHRISNRLGWAKTWAKAGKSQDPEKTRKELESWLPKQHWNDINALLVGFGQQVCTPLRPNCDSCTVNHLCPAA 391
BLAST of mRNA_D-mesarthrocarpus_Contig100.7.1 vs. uniprot
Match: UPI000331455A (endonuclease III-like protein 1 n=1 Tax=Sorex araneus TaxID=42254 RepID=UPI000331455A) HSP 1 Score: 216 bits (551), Expect = 2.510e-63 Identity = 127/278 (45.68%), Postives = 174/278 (62.59%), Query Frame = 3 Query: 219 EGVDNDTPIRPRGKLRTPTRQKIVY---------AKEPLVGWNT--WKQQWDGVLQMRSSKSAPVDRAGSKSLKDSSEGSPAQVR-FQVLLSGILSARTRDAVTAQAMGQIREACAPWAVSPTRLLEVGGEECLEDLLYPVGFAKTKAKHILTVCRMLADGEEGREAGDIPSTVKGLRSLPGVGPKVAHLVMDIAWGDCIGICVDTHVHRVSNRLGWVNTWGRVRQSPERTRRALEEWLPKKHWGEVNRLLVGFGQEICQPRKARCHSCVVQDICPSA 1016 E ++ +P + K +TP + Y A EPL GW W+QQ + MRS + APVD+ G + D S P +VR +QVLLS +LS++T+D VTA+AM ++R ++ R+L+ E L L+YPVGF ++KAK+I +L + R GDIPS+V L +LPGVGPK+AHL M +AWG GI VDTHVHR++NRLGW + +SPE TR ALEEWLP+ WGE+N LLVGFGQ++CQP + RC +C+ + +CPSA Sbjct: 11 EAQESHSPRKRPRKAQTPV--PVAYEAAEGESGAAVEPLQGWEPPHWRQQLANIRSMRSGRDAPVDQLGVEHCHDLSV--PPEVRRYQVLLSLMLSSQTKDQVTAEAMQRLRAR----GLTVARILQTD-EHTLGTLIYPVGFWRSKAKYIKQTTCIL----QQRYGGDIPSSVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANRLGWTK---KSTKSPEATRTALEEWLPRDLWGEINGLLVGFGQQVCQPVRPRCQACLNRALCPSA 272
BLAST of mRNA_D-mesarthrocarpus_Contig100.7.1 vs. uniprot
Match: A0A3F2RMS3_9STRA (Endonuclease III homolog n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RMS3_9STRA) HSP 1 Score: 216 bits (549), Expect = 1.380e-62 Identity = 136/319 (42.63%), Postives = 186/319 (58.31%), Query Frame = 3 Query: 84 LRSGGSSPRTSPVKRSLTAFQAMRCPPPRKSPRRHLERKRG----RLFAEGVDNDTPIRPRGKLRTPTRQKIVYAKEPLVGWNTWKQQWDGVLQMRSSKSAPVDRAGSKSLKDSSEGSPAQVR-FQVLLSGILSARTRDAVTAQAMGQIREACAPWAVSPTRLLEVGGEECLEDLLYPVGFAKTKAKHILTVCRMLADGEEGREAGDIPSTVKGLRSLPGVGPKVAHLVMDIAWGDCIGICVDTHVHRVSNRLGWVNTWGRVR---QSPERTRRALEEWLPKKHWGEVNRLLVGFGQEICQPRKARCHSCVVQDICPSA 1016 LRS GS + +++++ PP RKS R + + R AE V D P + K +T V KEP + WK+ G+ +MR+SK A VD+ G + D E PA VR F VL++ ++S++T+D V A AMG++ ++ +L + +E L L+ PVGF KAK+I +L EG DIP+T +GL +LPGVGPK+A LVM+ AW + +GICVDTHVHR++NRL WV TW + Q PE+TR LE+WLPK+HWG +N LLVGFGQ IC PR +C C +Q ICPSA Sbjct: 3 LRSSGSIKEDASLQKAVRVKVEAEQPPIRKS-RGGAKTQEAVGVKREKAETVQGDAPKKKAKKTKTR-----VPRKEP----SGWKELLRGIEEMRASKDAEVDKYGCEVFYD--EKFPAHVRRFHVLIAAMMSSQTKDPVNAAAMGRLIN----HGLTMESMLAIDQQE-LALLIRPVGFFNYKAKYIKQTVAILTKQAEGANIVDIPNTYEGLIALPGVGPKMATLVMNCAWDNTVGICVDTHVHRIANRLKWVKTWNKNNPKSQDPEKTRAELEDWLPKEHWGPINPLLVGFGQTICLPRGPKCSECKIQGICPSA 304
BLAST of mRNA_D-mesarthrocarpus_Contig100.7.1 vs. uniprot
Match: V9FQU0_PHYPR (Endonuclease III homolog n=22 Tax=Phytophthora TaxID=4783 RepID=V9FQU0_PHYPR) HSP 1 Score: 213 bits (543), Expect = 2.540e-61 Identity = 121/272 (44.49%), Postives = 170/272 (62.50%), Query Frame = 3 Query: 231 NDTPIRPRGKLRTPTRQKIVYAKEPLVGWNTWKQQWDGVLQMRSSKSAPVDRAGSKSLKDSSEGSPAQVRFQVLLSGILSARTRDAVTAQAMGQIREACAPWAVSPTRLLEVGGEECLEDLLYPVGFAKTKAKHILTVCRMLADGEE--GREAGDIPSTVKGLRSLPGVGPKVAHLVMDIAWGDCIGICVDTHVHRVSNRLGWVNTWGRVR---QSPERTR-----RALEEWLPKKHWGEVNRLLVGFGQEICQPRKARCHSCVVQDICPSA 1016 ++TP+ P+ K + + KI + P N WK+ G+ QMR+ K A VD+ G + D S P RF VL++ ++S++T+D V A AMG++ + ++ +LE+ +E L L+ PVGF KAK+I +L E G+E DIP+T +GL +LPGVGPK+A LVM+ AW + +GICVDTHVHR+SNRL WV TW + Q+PE+TR + LE+WLPK+HWG +N LLVGFGQ IC PR +C C ++ ICPSA Sbjct: 72 DETPLTPKKKAK---KAKIKKERVPRKEPNGWKEILHGIQQMRAKKDAEVDKYGCEVFFDESFPPPV-CRFHVLIAAMMSSQTKDPVNAAAMGRLIK----HGLTVESMLEIELQE-LAQLIRPVGFFNHKAKYIKQTASILTKQAEAEGKEVVDIPNTYEGLIALPGVGPKMATLVMNSAWQNTVGICVDTHVHRISNRLKWVKTWNKNNPKSQNPEKTRAVIETQELEDWLPKEHWGPINPLLVGFGQTICLPRGPKCSECKIRGICPSA 334
BLAST of mRNA_D-mesarthrocarpus_Contig100.7.1 vs. uniprot
Match: K3WGH9_GLOUD (Endonuclease III homolog n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGH9_GLOUD) HSP 1 Score: 211 bits (538), Expect = 3.120e-61 Identity = 109/234 (46.58%), Postives = 150/234 (64.10%), Query Frame = 3 Query: 324 WKQQWDGVLQMRSSKSAPVDRAGSKSLKDSSEGSPAQVRFQVLLSGILSARTRDAVTAQAMGQIREACAPWAVSPTRLLEVGGEECLEDLLYPVGFAKTKAKHILTVCRMLADGEEGREAGDIPSTVKGLRSLPGVGPKVAHLVMDIAWGDCIGICVDTHVHRVSNRLGWVNTWGRVR---QSPERTRRALEEWLPKKHWGEVNRLLVGFGQEICQPRKARCHSCVVQDICPSA 1016 WK G+ +MR+ + A VD G ++ D + +P RF L+S +LS++T+D V A AM ++ V R ++ E L +++PVGF + KAK+I V +L G + DIPST + L +LPGVGPK+A+LVMD AW + +GICVDTHVHR+SNRLGWVNTW + Q PE+TR L++WLP++HWG +N LLVGFGQ ICQPR +C C + +CPSA Sbjct: 54 WKDMLLGIQEMRAKRDADVDTMGCETHVDD-KVAPHVWRFHTLVSAMLSSQTKDPVNAAAMERLIGREGGLTVQTMRDID---ENELAQIIHPVGFYRNKAKYIKQVAEILTKQAAGSDVVDIPSTFEDLVALPGVGPKMAYLVMDCAWNNVVGICVDTHVHRISNRLGWVNTWNKKNPKAQDPEKTRAELQDWLPQEHWGPINVLLVGFGQTICQPRNPKCTECKISHLCPSA 283
BLAST of mRNA_D-mesarthrocarpus_Contig100.7.1 vs. uniprot
Match: A0A6G0XVI3_9STRA (Endonuclease III homolog n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XVI3_9STRA) HSP 1 Score: 212 bits (540), Expect = 5.280e-61 Identity = 111/233 (47.64%), Postives = 149/233 (63.95%), Query Frame = 3 Query: 324 WKQQWDGVLQMRSSKSAPVDRAGSKSLKDSSEGSPAQVRFQVLLSGILSARTRDAVTAQAMGQIREACAPWAVSPTRLLEVGGEECLEDLLYPVGFAKTKAKHILTVCRMLADGEEGREAGDIPSTVKGLRSLPGVGPKVAHLVMDIAWGDCIGICVDTHVHRVSNRLGWVNTWGR--VRQSPERTRRALEEWLPKKHWGEVNRLLVGFGQEICQPRKARCHSCVVQDICPSA 1016 WK WD + MR A VD G ++ D + P + RF VL++ +LS++T+D VTA AMG++R ++ +LE+ +E L ++L PVGF KAK+I C +L + + DIP T L +LPGVGPK+AHL M AW + +GICVD HVHR+SNRLGW +TWG+ Q PE+TRR LEEWLP +HW ++N LLVGFGQ+IC P +C C + DICPSA Sbjct: 101 WKLIWDKIKTMREEHPAAVDSEGCETFNDLTLDPPVR-RFHVLVACMLSSQTKDPVTAAAMGRLRA----HGLTIDSMLEIDEKE-LANILRPVGFFNNKAKYIKQTCAILQE----KYGSDIPPTYDELVALPGVGPKMAHLTMSCAWENTVGICVDVHVHRISNRLGWAHTWGKNGKSQDPEKTRRELEEWLPYEHWNDINMLLVGFGQQICLPVNPKCAECSISDICPSA 323
BLAST of mRNA_D-mesarthrocarpus_Contig100.7.1 vs. uniprot
Match: W4H6F9_9STRA (Endonuclease III homolog n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H6F9_9STRA) HSP 1 Score: 213 bits (542), Expect = 5.750e-61 Identity = 118/279 (42.29%), Postives = 160/279 (57.35%), Query Frame = 3 Query: 249 PRGKLRTPTRQKIVYAKEPLVGWNT---------------------WKQQWDGVLQMRSSKSAPVDRAGSKSLKDSSEGSPAQVRFQVLLSGILSARTRDAVTAQAMGQIREACAPWAVSPTRLLEVGGEECLEDLLYPVGFAKTKAKHILTVCRMLADGEEGREAGDIPSTVKGLRSLPGVGPKVAHLVMDIAWGDCIGICVDTHVHRVSNRLGWVNTW--GRVRQSPERTRRALEEWLPKKHWGEVNRLLVGFGQEICQPRKARCHSCVVQDICPSA 1016 P KL V +EP VG T WK WDG+ MR+ KSA VD G ++ D + P + RF VL++ +LS++T+D VTA AMG++R ++ +L + + L +L PVGF KAK+I C L + DIPST +GL +LPGVGPK+A L M AW + +GICVD HVHR++NRLGW TW G Q PE+TR+ LE+WLP++HW E+N LLVGFGQ++C P + +C SC + +CPSA Sbjct: 82 PAMKLEVVETGSFVKDEEPTVGIKTDDEANSRKMVKKSKHAHAPVNWKAMWDGIAGMRAEKSAAVDAQGCETFNDMTLDPPVR-RFHVLVACMLSSQTKDPVTAAAMGRLRA----HGLTVESMLAIKQAD-LAAMLRPVGFFNNKAKYIQQTCATL----QSLYQSDIPSTYEGLVALPGVGPKMATLTMSCAWNNTVGICVDIHVHRIANRLGWAKTWAKGGKSQDPEKTRKELEDWLPREHWHEINVLLVGFGQQLCTPLRPKCDSCAINHLCPSA 350
BLAST of mRNA_D-mesarthrocarpus_Contig100.7.1 vs. uniprot
Match: A0A1U7SMY5_CARSF (Endonuclease III-like protein 1 n=3 Tax=Carlito syrichta TaxID=1868482 RepID=A0A1U7SMY5_CARSF) HSP 1 Score: 211 bits (536), Expect = 1.260e-60 Identity = 135/325 (41.54%), Postives = 182/325 (56.00%), Query Frame = 3 Query: 114 SPVKRSLTAFQ-------AMRCPPPRKSPRRHLER----KRGRLFAEGVDNDTPIRPRGKLRTPTRQKIVYA-------------KEPLVGWNTWKQQWDGVLQMRSSKSAPVDRAGSKSLKDSSEGSPAQVRFQVLLSGILSARTRDAVTAQAMGQIREACAPWAVSPTRLLEVGGEECLEDLLYPVGFAKTKAKHILTVCRMLADGEEGREAGDIPSTVKGLRSLPGVGPKVAHLVMDIAWGDCIGICVDTHVHRVSNRLGWVNTWGRVRQSPERTRRALEEWLPKKHWGEVNRLLVGFGQEICQPRKARCHSCVVQDICPSA 1016 SP K + A RCP PRRH E ++G AEG + P++ + K R R + Y KEP+ W+QQ + MRS K APVD+ G++ D S SP R+QVLLS +LS++T+D VTA AM ++R ++ +L+ + L L+YPVGF + K K+I +L + R GDIP++V L +LPGVGPK+AHL M +AWG GI VDTHVHR++NRLGW R +SPE TR ALE WLP++ W E+N LLVGFGQ+ CQP RC +C+ Q +CP+A Sbjct: 3 SPQKSGMNALSMRMVTRSGSRCPGA--GPRRHGEDPAPLQKGEAVAEGKQSHRPVKHQRKAR---RLCVAYEASDGEKDKRAEPLKEPVWEPQDWQQQLANIRTMRSRKDAPVDQLGAEHCYDPS-ASPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRAR----GLTVDNILQTD-DSMLGQLIYPVGFWRNKVKYIKQTSAIL----QQRYGGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANRLGWTR---RATKSPEETRAALEAWLPRELWSEINGLLVGFGQQTCQPVHPRCGACLNQALCPAA 309 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig100.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig100.7.1 >prot_D-mesarthrocarpus_Contig100.7.1 ID=prot_D-mesarthrocarpus_Contig100.7.1|Name=mRNA_D-mesarthrocarpus_Contig100.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=361bp MRIPSAVLAMLCFGMKFLRSGGSSPRTSPVKRSLTAFQAMRCPPPRKSPRback to top mRNA from alignment at D-mesarthrocarpus_Contig100:45716..50843- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig100.7.1 ID=mRNA_D-mesarthrocarpus_Contig100.7.1|Name=mRNA_D-mesarthrocarpus_Contig100.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=5128bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig100:45716..50843- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig100:45716..50843- >mRNA_D-mesarthrocarpus_Contig100.7.1 ID=mRNA_D-mesarthrocarpus_Contig100.7.1|Name=mRNA_D-mesarthrocarpus_Contig100.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1083bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig100:45716..50843- (Discosporangium mesarthrocarpum MT17_79)back to top |