prot_D-dichotoma_M_contig985.20496.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_D-dichotoma_M_contig985.20496.1
Unique Name	prot_D-dichotoma_M_contig985.20496.1
Type	polypeptide
Organism	Dictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length	220

Homology

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BLAST of mRNA_D-dichotoma_M_contig985.20496.1 vs. uniprot
Match: A0A6H5KCX6_9PHAE (LHCP protein n=20 Tax=Phaeophyceae TaxID=2870 RepID=A0A6H5KCX6_9PHAE)

HSP 1 Score: 365 bits (936), Expect = 1.920e-126
Identity = 184/218 (84.40%), Postives = 200/218 (91.74%), Query Frame = 0

Query:    3 MNSAMVTIACLAGAQAFVAPSAFKGASVAAP-KSSSAMKMSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEIKHGRISMLAVAGHLVQQNYRLPGMLSNSADISFADMPNGLAALSKLPPLGLAQIVAFVGFLELAVMKNVEGSFPGDFTIGGNPFESQWDRFSEDTQESKRAIELNNGRAAQMGILAMMVHEKLSNQPYIINDLVGASYTFN 219
            M SA + +AC A A AFVAPSAF GA+VA P KSSSAMKMSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVE+KHGRI+MLA+AGHL QQN RLPGMLSNSA++SFADMPNG+AALSK+PP GLAQI AFVGFLELAVMKNVEGSFPGDFT GGNPF S WD  SE+TQESKRAIELNNGRAAQMGILA+MVHE+L+N+PYIINDL+GASYTFN
Sbjct:    1 MKSACMALACAASANAFVAPSAFNGAAVATPAKSSSAMKMSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNVRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILALMVHEELNNKPYIINDLLGASYTFN 218

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BLAST of mRNA_D-dichotoma_M_contig985.20496.1 vs. uniprot
Match: FCPB_MACPY (Fucoxanthin-chlorophyll a-c binding protein B, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=FCPB_MACPY)

HSP 1 Score: 342 bits (877), Expect = 1.800e-117
Identity = 172/218 (78.90%), Postives = 195/218 (89.45%), Query Frame = 0

Query:    3 MNSAMVTIACLAGAQAFVAPSAFKGASVA-APKSSSAMKMSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEIKHGRISMLAVAGHLVQQNYRLPGMLSNSADISFADMPNGLAALSKLPPLGLAQIVAFVGFLELAVMKNVEGSFPGDFTIGGNPFESQWDRFSEDTQESKRAIELNNGRAAQMGILAMMVHEKLSNQPYIINDLVGASYTFN 219
            M SA++ +AC A A  F  PSAF GA++  + K+ SAMKMSFESEIGAQ PLGFWDPLGLLADADQERFERLRYVE+KHGRI+MLA+AGHL QQN RLPGMLSNSA++SFADMPNG+AALSK+PP GLAQI AF+GFLELAVMKNVEGSFPGDFT+GGNPF + WD  SE+TQ SKRAIELNNGRAAQMGILA+MVHE+L+N+PY+INDLVGASYTFN
Sbjct:    1 MKSAVMAVAC-AAAPGFRGPSAFNGAALTTSAKACSAMKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGASWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLVGASYTFN 217

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BLAST of mRNA_D-dichotoma_M_contig985.20496.1 vs. uniprot
Match: A0A6H5JHT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT6_9PHAE)

HSP 1 Score: 339 bits (869), Expect = 3.430e-116
Identity = 169/198 (85.35%), Postives = 184/198 (92.93%), Query Frame = 0

Query:   23 SAFKGASVA-APKSSSAMKMSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEIKHGRISMLAVAGHLVQQNYRLPGMLSNSADISFADMPNGLAALSKLPPLGLAQIVAFVGFLELAVMKNVEGSFPGDFTIGGNPFESQWDRFSEDTQESKRAIELNNGRAAQMGILAMMVHEKLSNQPYIINDLVGASYTFN 219
            SAF GA+VA + KSSSAMKMSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVE+KHGRI+MLA+AGHL QQN RLPGMLSNSAD+SFADMPNG+AALSK+PP GLAQI AFVGFLELAVMKNVEGSFPGDFT GGNPF S WD  SE+TQ SKRAIELNNGRAAQMGILA+MVHE+L+N+PY+INDL+GA YTFN
Sbjct:   24 SAFNGAAVATSAKSSSAMKMSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNVRLPGMLSNSADLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYTFN 221

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BLAST of mRNA_D-dichotoma_M_contig985.20496.1 vs. uniprot
Match: FCPF_MACPY (Fucoxanthin-chlorophyll a-c binding protein F, chloroplastic (Fragment) n=1 Tax=Macrocystis pyrifera TaxID=35122 RepID=FCPF_MACPY)

HSP 1 Score: 335 bits (860), Expect = 5.670e-115
Identity = 172/211 (81.52%), Postives = 186/211 (88.15%), Query Frame = 0

Query:   10 IACLAGAQAFVAPSAFKGASVAAP-KSSSAMKMSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEIKHGRISMLAVAGHLVQQNYRLPGMLSNSADISFADMPNGLAALSKLPPLGLAQIVAFVGFLELAVMKNVEGSFPGDFTIGGNPFESQWDRFSEDTQESKRAIELNNGRAAQMGILAMMVHEKLSNQPYIINDLVGASYTFN 219
            IAC A A     PSAF GA+++ P KSSSAMKMSFESEIGAQ PLGFWDPLGLLADADQERFERLRYVE+KHGRI+MLA+AGHL QQN RLPGMLSNSA++SFADMPNG+AALSK+PP GLAQI  F+GFLELAVMKNVEGSFPGDF IGGNPF S WD  S +TQ SKRAIELNNGRAAQMGIL MMVHE+LSNQPYI NDL+GASYTFN
Sbjct:    2 IAC-AAAPGLRGPSAFNGAALSTPAKSSSAMKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFIIGGNPFASSWDSMSSETQASKRAIELNNGRAAQMGILGMMVHEELSNQPYITNDLLGASYTFN 211

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BLAST of mRNA_D-dichotoma_M_contig985.20496.1 vs. uniprot
Match: D8LNK6_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK6_ECTSI)

HSP 1 Score: 337 bits (865), Expect = 2.800e-113
Identity = 166/197 (84.26%), Postives = 183/197 (92.89%), Query Frame = 0

Query:   24 AFKGASVAAP-KSSSAMKMSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEIKHGRISMLAVAGHLVQQNYRLPGMLSNSADISFADMPNGLAALSKLPPLGLAQIVAFVGFLELAVMKNVEGSFPGDFTIGGNPFESQWDRFSEDTQESKRAIELNNGRAAQMGILAMMVHEKLSNQPYIINDLVGASYTFN 219
            AF GA+VA P KSSSAMKMSFESEIGAQPPLGFWDPLGLL DADQERFERLRYVE+KHGRI+MLA+AGHL QQN RLPGMLSNSA++SFADMPNG+AALSK+PP GLAQI AF+GFLELAVMKNVEGSFPGDFT+GGNPF S WD  SE+TQ SKRAIELNNGRAAQMGILA+MVHE+L+N+PY+INDL+GA YTFN
Sbjct:  181 AFNGAAVATPAKSSSAMKMSFESEIGAQPPLGFWDPLGLLEDADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGSSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYTFN 377

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BLAST of mRNA_D-dichotoma_M_contig985.20496.1 vs. uniprot
Match: A0A6H5JDS8_9PHAE (LHCP protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS8_9PHAE)

HSP 1 Score: 322 bits (825), Expect = 4.260e-110
Identity = 153/181 (84.53%), Postives = 169/181 (93.37%), Query Frame = 0

Query:   39 MKMSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEIKHGRISMLAVAGHLVQQNYRLPGMLSNSADISFADMPNGLAALSKLPPLGLAQIVAFVGFLELAVMKNVEGSFPGDFTIGGNPFESQWDRFSEDTQESKRAIELNNGRAAQMGILAMMVHEKLSNQPYIINDLVGASYTFN 219
            MKMSFESEIGAQPPLGFWDPLGLL DADQERFERLRYVE+KHGRI+MLA+AGHL QQN RLPGMLSNSA++SFADMPNG+AALSK+PP GLAQI AF+GFLELAVMKNVEGSFPGDFT+GGNPF S WD  SE+TQ SKRAIELNNGRAAQMGILA+MVHE+L+N+PY+INDL+GA Y FN
Sbjct:    1 MKMSFESEIGAQPPLGFWDPLGLLEDADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGSSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYNFN 181

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BLAST of mRNA_D-dichotoma_M_contig985.20496.1 vs. uniprot
Match: FCPD_MACPY (Fucoxanthin-chlorophyll a-c binding protein D, chloroplastic (Fragment) n=2 Tax=Phaeophyceae TaxID=2870 RepID=FCPD_MACPY)

HSP 1 Score: 321 bits (823), Expect = 8.890e-110
Identity = 154/182 (84.62%), Postives = 170/182 (93.41%), Query Frame = 0

Query:   38 AMKMSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEIKHGRISMLAVAGHLVQQNYRLPGMLSNSADISFADMPNGLAALSKLPPLGLAQIVAFVGFLELAVMKNVEGSFPGDFTIGGNPFESQWDRFSEDTQESKRAIELNNGRAAQMGILAMMVHEKLSNQPYIINDLVGASYTFN 219
            AMKMSFE EIGAQ PLGFWDPLGLLADADQERFERLRYVE+KHGRI+MLA+AGHL QQN RLPGMLSNSA++SFADMPNG+AALSK+PP GLAQI  F+GFLELAVMKNVEGSFPGDFT+GGNPF S WD  SE+TQESKRAIELNNGRAAQMGILA+MVHE+L+N+PY+INDL+GASY FN
Sbjct:    1 AMKMSFELEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNARLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFTLGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGASYNFN 182

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BLAST of mRNA_D-dichotoma_M_contig985.20496.1 vs. uniprot
Match: FCPC_MACPY (Fucoxanthin-chlorophyll a-c binding protein C, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=FCPC_MACPY)

HSP 1 Score: 322 bits (825), Expect = 1.440e-109
Identity = 164/218 (75.23%), Postives = 188/218 (86.24%), Query Frame = 0

Query:    3 MNSAMVTIACLAGAQAFVAPSAFKGASVA-APKSSSAMKMSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEIKHGRISMLAVAGHLVQQNYRLPGMLSNSADISFADMPNGLAALSKLPPLGLAQIVAFVGFLELAVMKNVEGSFPGDFTIGGNPFESQWDRFSEDTQESKRAIELNNGRAAQMGILAMMVHEKLSNQPYIINDLVGASYTFN 219
            M SA++ +A  + A     PSAF GA++  + KSSSAMKMSFESEIGAQ PLGFWDPLGLL DADQ+ FERLRYVE+K GRI+MLA+AGHL QQN RLPGMLSNSA++SFADMPNG+AALSK+PP GLAQI  F+GFLELAVMKNVEGSFPGDFT+GGNPF S WD  S +TQ SKRAIELNNGRAAQMGILA+MVHE+L+N+PY+INDL+GASY FN
Sbjct:    1 MKSAIMAVA--SAAPGLRGPSAFNGAALTTSAKSSSAMKMSFESEIGAQAPLGFWDPLGLLEDADQDAFERLRYVEVKLGRIAMLAIAGHLTQQNARLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFTLGGNPFASSWDAMSAETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGASYNFN 216

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BLAST of mRNA_D-dichotoma_M_contig985.20496.1 vs. uniprot
Match: FCPE_MACPY (Fucoxanthin-chlorophyll a-c binding protein E, chloroplastic n=3 Tax=Phaeophyceae TaxID=2870 RepID=FCPE_MACPY)

HSP 1 Score: 296 bits (757), Expect = 2.810e-99
Identity = 148/196 (75.51%), Postives = 168/196 (85.71%), Query Frame = 0

Query:   25 FKGASVA-APKSSSAMKMSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEIKHGRISMLAVAGHLVQQNYRLPGMLSNSADISFADMPNGLAALSKLPPLGLAQIVAFVGFLELAVMKNVEGSFPGDFTIGGNPFESQWDRFSEDTQESKRAIELNNGRAAQMGILAMMVHEKLSNQPYIINDLVGASYTFN 219
            F GA++A + KSSSAMKMSFESEIGAQPP+GFWDPLGL+ADADQERF+RLRYVEIKHGRI+MLAV GH+ QQN RLPGMLS   +++FAD PNG+AA SK+PPLG  QI+  +G  EL V+K VEGSFPGD T GGN F+S WD  SE+TQ SKRAIELNNGRAAQMGILAMMVHE+LSNQPYIINDL GA+Y FN
Sbjct:   17 FNGAALATSAKSSSAMKMSFESEIGAQPPIGFWDPLGLVADADQERFDRLRYVEIKHGRIAMLAVVGHITQQNTRLPGMLSFKENLAFADSPNGVAAFSKIPPLGTLQIILAIGCHELFVVKQVEGSFPGDCTTGGNIFQSAWDNMSEETQASKRAIELNNGRAAQMGILAMMVHEQLSNQPYIINDLAGAAYQFN 212

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BLAST of mRNA_D-dichotoma_M_contig985.20496.1 vs. uniprot
Match: A0A6H5KBS3_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBS3_9PHAE)

HSP 1 Score: 295 bits (754), Expect = 6.550e-99
Identity = 148/206 (71.84%), Postives = 165/206 (80.10%), Query Frame = 0

Query:   39 MKMSFESEIGAQPPLGFWDPLGLLADA-------------------------DQERFERLRYVEIKHGRISMLAVAGHLVQQNYRLPGMLSNSADISFADMPNGLAALSKLPPLGLAQIVAFVGFLELAVMKNVEGSFPGDFTIGGNPFESQWDRFSEDTQESKRAIELNNGRAAQMGILAMMVHEKLSNQPYIINDLVGASYTFN 219
            MKMSFESE+GAQPPLGF+DPLGLL D                          DQERF+RLRYVE+KHGRISMLAVAGHLV QNYR PG LS  A ++FADMPNG+AA+SK+PPLGLAQIVAF+GFLEL VMKNVEGSFPGD TIGGNPF +QWD  SE+T+ SKRAIELNNGRAAQMGILAMM+HE++SNQPYIINDL+ A YTFN
Sbjct:    1 MKMSFESELGAQPPLGFFDPLGLLIDQVVPQLPPSCQSSLLVICADGLEPWEDQERFDRLRYVEVKHGRISMLAVAGHLVAQNYRFPGYLSYDAKLTFADMPNGVAAISKIPPLGLAQIVAFIGFLELNVMKNVEGSFPGDMTIGGNPFAAQWDAMSEETKLSKRAIELNNGRAAQMGILAMMIHEEISNQPYIINDLLNAPYTFN 206

The following BLAST results are available for this feature:

BLAST of mRNA_D-dichotoma_M_contig985.20496.1 vs. uniprot

BLAST of mRNA_D-dichotoma_M_contig985.20496.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KCX6_9PHAE	1.920e-126	84.40	LHCP protein n=20 Tax=Phaeophyceae TaxID=2870 RepI...	[more]
FCPB_MACPY	1.800e-117	78.90	Fucoxanthin-chlorophyll a-c binding protein B, chl...	[more]
A0A6H5JHT6_9PHAE	3.430e-116	85.35	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
FCPF_MACPY	5.670e-115	81.52	Fucoxanthin-chlorophyll a-c binding protein F, chl...	[more]
D8LNK6_ECTSI	2.800e-113	84.26	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
A0A6H5JDS8_9PHAE	4.260e-110	84.53	LHCP protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
FCPD_MACPY	8.890e-110	84.62	Fucoxanthin-chlorophyll a-c binding protein D, chl...	[more]
FCPC_MACPY	1.440e-109	75.23	Fucoxanthin-chlorophyll a-c binding protein C, chl...	[more]
FCPE_MACPY	2.810e-99	75.51	Fucoxanthin-chlorophyll a-c binding protein E, chl...	[more]
A0A6H5KBS3_9PHAE	6.550e-99	71.84	LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10		coord: 46..215 e-value: 4.9E-25 score: 90.4
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 47..199 e-value: 2.9E-32 score: 112.4
None	No IPR available	PANTHER	PTHR21649:SF63		coord: 7..203
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 20..31
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..7
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 32..219
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 8..19
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..31
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..18 score: 0.597
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 34..209
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 7..203

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-dichotoma_M_contig985	contig	D-dichotoma_M_contig985:51010..52713 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_D-dichotoma_M_contig985.20496.1	mRNA_D-dichotoma_M_contig985.20496.1	Dictyota dichotoma ODC1387m male	mRNA	D-dichotoma_M_contig985 50508..52747 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_D-dichotoma_M_contig985.20496.1 ID=prot_D-dichotoma_M_contig985.20496.1|Name=mRNA_D-dichotoma_M_contig985.20496.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=220bp
MKMNSAMVTIACLAGAQAFVAPSAFKGASVAAPKSSSAMKMSFESEIGAQ
PPLGFWDPLGLLADADQERFERLRYVEIKHGRISMLAVAGHLVQQNYRLP
GMLSNSADISFADMPNGLAALSKLPPLGLAQIVAFVGFLELAVMKNVEGS
FPGDFTIGGNPFESQWDRFSEDTQESKRAIELNNGRAAQMGILAMMVHEK
LSNQPYIINDLVGASYTFN*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023329	Chlorophyll_a/b-bd_dom_sf
IPR022796	Chloroa_b-bind
IPR001344	Chloro_AB-bd_pln