prot_D-dichotoma_M_contig96.20300.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig96.20300.1
Unique Nameprot_D-dichotoma_M_contig96.20300.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length725
Homology
BLAST of mRNA_D-dichotoma_M_contig96.20300.1 vs. uniprot
Match: D8LLY0_ECTSI (WD-40 repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLY0_ECTSI)

HSP 1 Score: 410 bits (1054), Expect = 3.820e-121
Identity = 251/564 (44.50%), Postives = 317/564 (56.21%), Query Frame = 0
Query:    2 KMLAEEKRTWDAYELNSRNHLRMIEQAREDRRSVAVRVQEDEAHRKSSEEEGLTFNGGVTTACRMRRASPALAAVLSTHNGQIHGMSLSKDGRWILCGGDDHRVRLWDTESFAKKRSSSENQEASSPSPASSRNAERTAAVAADAALGWECSRELIGHTAAVRDVGFNPHFKDCEGVPANLGSAKSKILV-PAEKISP-RLECMLASASTDNTLRIWDLSFSPRIPKFILRGHRGVVYRCCFAPCGRQLXXXXXXXXXXXXXAM----------------------------------------------------------------------------------------------------EAQREQLLAIPRSVADQSDEDPCPSKATSNGFSLSVTLVNPNSGSEMKTDEYYRGCKLVLRATGVTPFTGFYLGAVSAEGMWEGYQVRDLFRFPSRAGNRLVLGSETVWVTLRERAPPMIPAALRAAKIRKPRKRNFDTVGRTSLFARVLKSGSWVEAAMMLSATARLDFGGIKVSGAKEVLGQIKNVVGRNIIVAEATS 463
            +ML EE R+WDAYELN+RNH RMIEQ REDR + A +++E E  R + EEEGLTFN GV    R  RAS ALA VL  H   +H M  S +GRWIL GGDD  VRLWDTE+FA+K S  +N++ ++ + A      R  AVAAD ALGWEC+REL+GHTAAVRDV FNP F    G P +   A+ +    P  + +P RL C+LASASTD T+RIWDLSF+PR+ +F L+GH+GVV  C FAP G +L              +                                                                                                    E +  +LL IP++V  Q D  PCP++A SNGFSL+VT++N +SG + +T+EYYRGCKLVLRA  +  FTG Y+  VSAEG+WEG++   +FRFP+   ++ VLG ETVWVTLRER PP  PAA+ AA   KPRKR FDTV RT +FA+ LK+G W EA MMLS  A+L F  +K +GA EV  +I+ V+GRNI V  A S
Sbjct:  126 RMLLEELRSWDAYELNTRNHNRMIEQEREDRAAAANKLKESEERRLACEEEGLTFNHGVVVCHRRWRASSALATVLPAHPCPVHAMRQSSNGRWILSGGDDLTVRLWDTEAFARKLSDPKNEKRAAKAAA------RAGAVAADLALGWECARELVGHTAAVRDVEFNPLFG---GPPEDQEDAQEEGEGGPGSEGAPVRLACVLASASTDLTVRIWDLSFNPRVARFALKGHKGVVSACRFAPSGDRLASCSADGTIRLWNVLNGTNVFCYEXXXXXXXXXXXXXXXXXXXXXXDIGERAIRVWFADMPLYDRDPVQFGLRLRWTRSGLIKRVRANTESSAMGFFLSRQEDRESRESSDESEGEKEYRELLKIPKTVLTQCDASPCPTQAVSNGFSLTVTILN-DSGKDTRTEEYYRGCKLVLRARALKKFTGLYVAGVSAEGLWEGFEA--IFRFPTIVASKSVLGRETVWVTLRERPPPTPPAAIFAATRLKPRKRLFDTVARTGVFAKALKAGDWAEATMMLSVAAKLQFSKVKATGATEVADEIRKVLGRNIAVHNARS 677          
BLAST of mRNA_D-dichotoma_M_contig96.20300.1 vs. uniprot
Match: A0A836CAF5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAF5_9STRA)

HSP 1 Score: 110 bits (275), Expect = 5.020e-21
Identity = 82/237 (34.60%), Postives = 113/237 (47.68%), Query Frame = 0
Query:    2 KMLAEEKRTWDAYELNSRNHLRMIEQAREDRRSVAVRVQEDEAHRKSSEEEGLTFNGGVTTACRMRRASPALAAVLSTHNGQIHGMSLSKDGRWILCGGDDHRVRLWDTESFAKKRSSSENQEASSPSPASSRNAERTAAVAADAALGWECSRELIGHTAAVRDVGFNPHFKDCEGVPANLGSAKSKILVPAEKISPRLECMLASASTDNTLRIWDLSFSPRIPKFILRGHRGVVYR 238
            KMLAEEKRTWDAYELN+RN+ R++  A E++                 +EEG+ F  G+    R  + SP L   L  H   +  +++S   R+I     DH V+LWD     K R +    +A S +P S++           +AL W+C   L GHT AV DV F PHF      P   G+A  +   P     PRL+  + +A     + +WDLS S R P+  L  H   V R
Sbjct:   97 KMLAEEKRTWDAYELNARNYARLVRLAHEEKEXXXXXXXXXXXXXXLQQEEGILFENGIAVGNRRWKNSPELKTALHAHTEPVLAIAVSSCLRYIASASADHCVKLWDM----KPRETGCG-DAVSAAPQSTKTEL--------SALNWDCVAVLAGHTRAVHDVAFAPHFS-LHHRPR--GAAAYRYGDP-----PRLDHTVVTAGGCGRVLVWDLSISARRPRHALDAHPHAVAR 312          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig96.20300.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLY0_ECTSI3.820e-12144.50WD-40 repeat-containing protein n=1 Tax=Ectocarpus... [more]
A0A836CAF5_9STRA5.020e-2134.60Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 553..573
NoneNo IPR availablePANTHERPTHR42968:SF10IP10415Pcoord: 67..266
NoneNo IPR availablePANTHERPTHR42968FAMILY NOT NAMEDcoord: 67..266
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 96..110
score: 30.51
coord: 204..218
score: 42.15
coord: 248..262
score: 41.92
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 70..109
e-value: 1.2E-6
score: 38.1
coord: 149..217
e-value: 6.5E-6
score: 35.6
coord: 222..261
e-value: 9.9E-11
score: 51.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 76..109
e-value: 3.3E-7
score: 30.9
coord: 201..217
e-value: 0.25
score: 12.3
coord: 227..261
e-value: 2.5E-7
score: 31.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 229..270
score: 13.65
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 77..118
score: 13.449
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 203..219
score: 9.539
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 248..262
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 204..218
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 77..118
score: 12.473
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 203..270
score: 16.981
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 73..273

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig96contigD-dichotoma_M_contig96:44124..59107 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig96.20300.1mRNA_D-dichotoma_M_contig96.20300.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig96 30580..59218 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig96.20300.1 ID=prot_D-dichotoma_M_contig96.20300.1|Name=mRNA_D-dichotoma_M_contig96.20300.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=725bp
MKMLAEEKRTWDAYELNSRNHLRMIEQAREDRRSVAVRVQEDEAHRKSSE
EEGLTFNGGVTTACRMRRASPALAAVLSTHNGQIHGMSLSKDGRWILCGG
DDHRVRLWDTESFAKKRSSSENQEASSPSPASSRNAERTAAVAADAALGW
ECSRELIGHTAAVRDVGFNPHFKDCEGVPANLGSAKSKILVPAEKISPRL
ECMLASASTDNTLRIWDLSFSPRIPKFILRGHRGVVYRCCFAPCGRQLAS
CSADGTVRLWDAMEAQREQLLAIPRSVADQSDEDPCPSKATSNGFSLSVT
LVNPNSGSEMKTDEYYRGCKLVLRATGVTPFTGFYLGAVSAEGMWEGYQV
RDLFRFPSRAGNRLVLGSETVWVTLRERAPPMIPAALRAAKIRKPRKRNF
DTVGRTSLFARVLKSGSWVEAAMMLSATARLDFGGIKVSGAKEVLGQIKN
VVGRNIIVAEATSRQNTVGRVLTELEASSKLESVPCRSDGWGWPSPATRW
KKRIRRRYGGKDQRIVAILRNKCFPRGNESPPLKAMRDEDHQGSFENEEP
ARRAAAEKQVVAELKRLERLRASGNEPWKEVNPYRHTRHTRHTRRTRHKR
CGRRYRLSWGFISSRRVLLDRAKKEKNTIMIWDGSFGADEPHLRMRLPDY
YPTSSTWSTPSDLNDDIGARALEEALAVGEKSTNTVMREMRANVEDKSDA
AEVLRLTDALLAQNRRERQVIFRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf