prot_D-dichotoma_M_contig931.20056.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig931.20056.1
Unique Nameprot_D-dichotoma_M_contig931.20056.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length125
Homology
BLAST of mRNA_D-dichotoma_M_contig931.20056.1 vs. uniprot
Match: A0A6H5L203_9PHAE (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L203_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 8.540e-60
Identity = 90/104 (86.54%), Postives = 96/104 (92.31%), Query Frame = 0
Query:    1 MEGQSTRFEIELELMNSLSSPEYIHYLAQSGYLEDKAFMRFLEYLQYFKRPEYAKFITYPHCLAMLDLLINNPAFRKEIAHVSFRDFVHQQQFLHWQFGKRVQP 104
            MEG  TRFE+ELELMN L+SPEY+HYLAQSGYL+D+AF+RFLEYLQYFKRPEYAKFITYPH LAMLDLLINNP FRKEIAHVSFRDFVHQQQFLHWQFGK   P
Sbjct:    1 MEGSGTRFEMELELMNCLASPEYLHYLAQSGYLDDRAFVRFLEYLQYFKRPEYAKFITYPHSLAMLDLLINNPPFRKEIAHVSFRDFVHQQQFLHWQFGKTAAP 104          
BLAST of mRNA_D-dichotoma_M_contig931.20056.1 vs. uniprot
Match: D7FV80_ECTSI (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV80_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 1.530e-39
Identity = 65/77 (84.42%), Postives = 71/77 (92.21%), Query Frame = 0
Query:    1 MEGQSTRFEIELELMNSLSSPEYIHYLAQSGYLEDKAFMRFLEYLQYFKRPEYAKFITYPHCLAMLDLLINNPAFRK 77
            MEG  TRFE+ELELMN L+SPEY+HYLAQ GYL+D+AF+RFLEYLQYFKRPEYAKFITYPH LAMLDLLINNP FRK
Sbjct:    1 MEGSGTRFEMELELMNCLASPEYLHYLAQGGYLDDRAFIRFLEYLQYFKRPEYAKFITYPHSLAMLDLLINNPPFRK 77          
BLAST of mRNA_D-dichotoma_M_contig931.20056.1 vs. uniprot
Match: A0A835Z5G5_9STRA (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G5_9STRA)

HSP 1 Score: 131 bits (330), Expect = 6.200e-37
Identity = 59/95 (62.11%), Postives = 75/95 (78.95%), Query Frame = 0
Query:    7 RFEIELELMNSLSSPEYIHYLAQSGYLEDKAFMRFLEYLQYFKRPEYAKFITYPHCLAMLDLLINNPAFRKEIAHVSFRDFVHQQQFLHWQFGKR 101
            RFE+ELE +  L+SPEY+H+LAQ  Y +D AFM FL+YL Y++RP+YAK++ YPHCLAMLD L+N+  FR E+   SFRDFVHQQQF HWQ  +R
Sbjct:   25 RFEVELEFVQCLASPEYLHFLAQQRYFDDPAFMAFLQYLTYWRRPQYAKYLMYPHCLAMLDALLNSKRFRSELLMESFRDFVHQQQFFHWQHKRR 119          
BLAST of mRNA_D-dichotoma_M_contig931.20056.1 vs. uniprot
Match: A0A7S3XZ41_HETAK (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZ41_HETAK)

HSP 1 Score: 132 bits (331), Expect = 9.700e-37
Identity = 61/97 (62.89%), Postives = 78/97 (80.41%), Query Frame = 0
Query:    1 MEGQSTRFEIELELMNSLSSPEYIHYLAQSGYLEDKAFMRFLEYLQYFKRPEYAKFITYPHCLAMLDLLINNPAFRKEIAHVSFRDFVHQQQFLHWQ 97
            ++G  +RFE+ELE +  LSSPEY+HYLAQ+ Y ED AF+ FL YLQY++RPEYAKFI YPHCLA +++L  + AFRKE+A   F++FVHQQQF HWQ
Sbjct:   40 LDGGHSRFEVELEFVQCLSSPEYLHYLAQNKYFEDPAFINFLHYLQYWRRPEYAKFIIYPHCLAFMEML-EDEAFRKELAKPGFKEFVHQQQFFHWQ 135          
BLAST of mRNA_D-dichotoma_M_contig931.20056.1 vs. uniprot
Match: A0A6U6IBL1_9STRA (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6IBL1_9STRA)

HSP 1 Score: 129 bits (323), Expect = 1.220e-35
Identity = 62/106 (58.49%), Postives = 80/106 (75.47%), Query Frame = 0
Query:    2 EGQST------RFEIELELMNSLSSPEYIHYLAQSGYLEDKAFMRFLEYLQYFKRPEYAKFITYPHCLAMLDLLINNPAFRKEIAHVSFRDFVHQQQFLHWQFGKR 101
            +G+ST      RFE+ELE +  L+SP Y+H+LA SG L D +F+ FLEYL+Y+ RPEYA+FITYPHCL  LDLL  N  FR+E+A+V+FR+FVH+QQF  WQF  R
Sbjct:   22 DGESTIDLPRNRFELELEFVQCLASPAYLHHLATSGLLSDSSFLSFLEYLRYWSRPEYARFITYPHCLYFLDLLTTNETFRREMANVAFRNFVHEQQFYSWQFRSR 127          
BLAST of mRNA_D-dichotoma_M_contig931.20056.1 vs. uniprot
Match: A0A7S2XM67_9STRA (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XM67_9STRA)

HSP 1 Score: 126 bits (316), Expect = 1.250e-34
Identity = 57/92 (61.96%), Postives = 75/92 (81.52%), Query Frame = 0
Query:    7 RFEIELELMNSLSSPEYIHYLAQSGYLEDKAFMRFLEYLQYFKRPEYAKFITYPHCLAMLDLLINNPAFRKEIAHVSFRDFVHQQQFLHWQF 98
            RFE+ELE + SL+SP Y+H+LA SG L+  +F+ FL YLQY+KRPEYAK+I+YPHC   LDLLI+N  FR+E+A+V FR+FVH+QQF  WQ+
Sbjct:   28 RFELELEFLQSLASPAYVHHLATSGILQSPSFIAFLRYLQYWKRPEYAKYISYPHCFFFLDLLIHNEPFRREMANVGFRNFVHEQQFYSWQY 119          
BLAST of mRNA_D-dichotoma_M_contig931.20056.1 vs. uniprot
Match: A0A7S3QJ33_9STRA (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJ33_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.670e-33
Identity = 58/97 (59.79%), Postives = 77/97 (79.38%), Query Frame = 0
Query:    7 RFEIELELMNSLSSPEYIHYLAQSGYLEDKAFMRFLEYLQ-YFKRPEYAKFITYPHCLAMLDLLINNPAFRKEIAHVSFRDFVHQQQFLHWQFGKRV 102
            RFE+ELE + SL+SP Y+H+LA  GY +D+AF+ +L YL+ Y+ RPEYAK+ITYPHCL  LDL I   AFRKEI+ V FR+FVH+QQF++WQ+  R+
Sbjct:   77 RFELELEFVQSLASPAYLHHLATQGYFQDEAFLTYLRYLRSYWTRPEYAKYITYPHCLFFLDLAIEKEAFRKEISQVGFRNFVHEQQFMNWQYRSRM 173          
BLAST of mRNA_D-dichotoma_M_contig931.20056.1 vs. uniprot
Match: A0A7S2EVA4_TRICV (Mediator of RNA polymerase II transcription subunit 31 (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EVA4_TRICV)

HSP 1 Score: 115 bits (287), Expect = 2.990e-30
Identity = 52/91 (57.14%), Postives = 70/91 (76.92%), Query Frame = 0
Query:    7 RFEIELELMNSLSSPEYIHYLAQSGYLEDKAFMRFLEYLQYFKRPEYAKFITYPHCLAMLDLLINNPAFRKEIAHVSFRDFVHQQQFLHWQ 97
            RFE+ELE +  L+SP Y+H+LA SG L D +F+ FL YL+Y+  PEYA+F+ YPHCL  LDLL  +  FR+E+A+V+FR+FVH+QQF  WQ
Sbjct:   39 RFELELEFVQCLASPAYMHHLATSGLLSDPSFLSFLRYLRYWSHPEYARFLVYPHCLYFLDLLCESEGFRREMANVAFRNFVHEQQFYGWQ 129          
BLAST of mRNA_D-dichotoma_M_contig931.20056.1 vs. uniprot
Match: A0A7S0G218_9RHOD (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G218_9RHOD)

HSP 1 Score: 107 bits (266), Expect = 2.160e-27
Identity = 52/113 (46.02%), Postives = 76/113 (67.26%), Query Frame = 0
Query:    1 MEGQSTRFEIELELMNSLSSPEYIHYLAQSGYLEDKAFMRFLEYLQYFKRPEYAKFITYPHCLAMLDLLINNPAFRKEIAHVSFRDFVHQQQFLHWQFGKRVQPFHDEQGSSD 113
            ++    RFE ELE +  L+SP Y+HYLAQ+ + EDK F+ +L+YLQY++ P YAKFI +PHCL  L LL     FR+ +    +  FVHQQQ  +WQFG+R++P  +E  +++
Sbjct:    6 VDKDQVRFETELEFVQCLASPGYLHYLAQNRFFEDKDFLDYLKYLQYWRLPSYAKFIVFPHCLYFLRLL-QEEEFREALKRQDYYTFVHQQQGYYWQFGRRLKPRAEEPSTTE 117          
BLAST of mRNA_D-dichotoma_M_contig931.20056.1 vs. uniprot
Match: A0A151ZRQ8_9MYCE (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZRQ8_9MYCE)

HSP 1 Score: 107 bits (268), Expect = 2.170e-27
Identity = 50/97 (51.55%), Postives = 70/97 (72.16%), Query Frame = 0
Query:    2 EGQSTRFEIELELMNSLSSPEYIHYLAQSGYLEDKAFMRFLEYLQYFKRPEYAKFITYPHCLAMLDLLINNPAFRKEIAHVSFRDFVHQQQFLHWQF 98
            E  S RF +ELE +  LS+P+Y+++LAQ+ Y +DKAF+ +L YL Y+K+P+YAK+I YP CL  LDL I    FR+E+ H    +F+HQQQF HWQ+
Sbjct:   22 EANSLRFIMELEFVQCLSNPKYLNFLAQNRYFQDKAFINYLSYLLYWKKPKYAKYIVYPQCLYFLDL-IQEERFRQELNHFQSAEFIHQQQFYHWQY 117          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig931.20056.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L203_9PHAE8.540e-6086.54Mediator of RNA polymerase II transcription subuni... [more]
D7FV80_ECTSI1.530e-3984.42Mediator of RNA polymerase II transcription subuni... [more]
A0A835Z5G5_9STRA6.200e-3762.11Mediator of RNA polymerase II transcription subuni... [more]
A0A7S3XZ41_HETAK9.700e-3762.89Mediator of RNA polymerase II transcription subuni... [more]
A0A6U6IBL1_9STRA1.220e-3558.49Mediator of RNA polymerase II transcription subuni... [more]
A0A7S2XM67_9STRA1.250e-3461.96Mediator of RNA polymerase II transcription subuni... [more]
A0A7S3QJ33_9STRA1.670e-3359.79Mediator of RNA polymerase II transcription subuni... [more]
A0A7S2EVA4_TRICV2.990e-3057.14Mediator of RNA polymerase II transcription subuni... [more]
A0A7S0G218_9RHOD2.160e-2746.02Mediator of RNA polymerase II transcription subuni... [more]
A0A151ZRQ8_9MYCE2.170e-2751.55Mediator of RNA polymerase II transcription subuni... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008831Mediator complex, subunit Med31PFAMPF05669Med31coord: 6..97
e-value: 2.8E-33
score: 113.8
IPR008831Mediator complex, subunit Med31PANTHERPTHR13186MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT SOH1coord: 4..121
IPR038089Mediator complex, subunit Med31 domain superfamilyGENE3D1.10.10.1340coord: 1..92
e-value: 1.1E-28
score: 100.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig931contigD-dichotoma_M_contig931:70281..89847 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig931.20056.1mRNA_D-dichotoma_M_contig931.20056.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig931 70095..90265 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig931.20056.1 ID=prot_D-dichotoma_M_contig931.20056.1|Name=mRNA_D-dichotoma_M_contig931.20056.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=125bp
MEGQSTRFEIELELMNSLSSPEYIHYLAQSGYLEDKAFMRFLEYLQYFKR
PEYAKFITYPHCLAMLDLLINNPAFRKEIAHVSFRDFVHQQQFLHWQFGK
RVQPFHDEQGSSDGPPQAQQQQQQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008831Mediator_Med31
IPR038089Med31_sf