prot_D-dichotoma_M_contig924.19978.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig924.19978.1
Unique Nameprot_D-dichotoma_M_contig924.19978.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length392
Homology
BLAST of mRNA_D-dichotoma_M_contig924.19978.1 vs. uniprot
Match: D7G262_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G262_ECTSI)

HSP 1 Score: 197 bits (502), Expect = 2.500e-56
Identity = 109/222 (49.10%), Postives = 146/222 (65.77%), Query Frame = 0
Query:   15 ATSAIVRADCDELK-AISLPLTGDLTVTLTEANAPCDNIAEGELEDFVIEGGALTLTGLDVATFSNVRFTVMDGASLIFDFDKTEFGPNSDFVVEDNYGEFMMEIMEGGYVEFTGEFLATGLRNYFSIFRNE--GTLEFKSDAEFLEPGTNCFRVNTGKLRFRGNLNIVDAIFLGIRNEGGTVRVAGDSYFENVGSSFDGADGAAVANFDDGIAIFDGTAVF 233
            ATS++ RA CD+L+ A+S PLTGD T+ L+  +A C  + + ELE+F +EGG LTLTG     F+N++FT+MD A LIFD+D TEFGPN  +  ED++G +M++++ GG VEF GE  ATGL N  S+F NE  G +EF  +A F + GTN FR N G+LRF G+    + I+L I NEGG+VR+         G SFDG  G   +N D G AIF G A+F
Sbjct:   14 ATSSV-RASCDDLRTALSSPLTGDTTLELS-GDADCPILEDNELEEFTVEGGTLTLTGPSTTKFTNLKFTIMDQAGLIFDYDTTEFGPNLGYEQEDSFGGYMVQVLSGGSVEFLGEMAATGLANMRSVFYNEAGGNIEFADNAVFDDIGTNVFRSNLGRLRFYGDATFTNNIYLAIDNEGGSVRIXXXXXXVENGRSFDGHSGGGFSNTDGGTAIFRGPALF 233          
BLAST of mRNA_D-dichotoma_M_contig924.19978.1 vs. uniprot
Match: D7FHY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY2_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 2.050e-29
Identity = 160/414 (38.65%), Postives = 208/414 (50.24%), Query Frame = 0
Query:    2 KLIYGAAVGCVLAATSAIVRA-DCDELKA----ISLPLTGDLTVTLTEANAPCDNIAEGELEDFVIEGG-ALTLTGLD-VATFSNVRFTVMDGASLIFDFDKTEFGPNSDFVVEDNYGEFMMEIMEGGYVEFTGEFLATGLRNYFSIFRNEGTLEFKSDAEFLEPGTNCFRVNTGKLRFRGNLNIVDAIFLGIRNEG--GTVRVAGDSYFENVGSSFDGADGAAVANFDDGIAIFDGTAVFYDMFSQENGGAVFNEGKMKFYSKARFFENR------AGIDGGAVYNSN--GVLKFFGAVQMIDNIASDNGGALGVGGGGEVRFSRXXXXXXXXXXXXXXXXXXXXXGNFEDDGEPSSVEFRKPTKVRFEGNVKTGTEL------GCNSIFVEDGSE--IIGYPVDDDVDICEE 390
            K + G      LA  ++ VR+ +CD++ A    +S     DL  T+   + P ++ AE EL    IE G  LT+   +    F N+RF V +GASLIFD   T  GPNS     +  G+F+ ++ EGG + F G+F A+ + N  S+F N G++EFK D+ F   G N FR N                     N+G    VR +  + F +    FDGA G A+ N   G AIF   AVF D    E G AV N GKM+FY KA F +NR       G+   AVY+S+  G L F  AVQ   N A + GG + V G        XXXXXXXXXXXXXXXXXXXXX     DG   SV F KP  VR   N     E       GC+  +VE G+E  ++G+  DD   IC+E
Sbjct:    3 KSVIGRCALLALALMASTVRSQECDDIDAYFGDVSSVTEIDLG-TIIRVDCPSNDDAE-ELPYITIESGKTLTVKSEESFVRFVNLRFIVEEGASLIFDMPVTRVGPNSG--QSEGAGDFVFDVAEGGSLTFNGKFRASQVSNVRSVFYNRGSIEFKDDSLFNNNG-NVFRSNXXXXXXXXXXXXXXXXXXXXXNDGEDSFVRFSKTATFIDNAGFFDGAWGCAIDN--GGTAIFRDDAVFSDHDCDE-GAAVSNTGKMRFYGKAYFSDNRNYRDTGGGVLNRAVYDSDQAGDLVFKAAVQFNRNTA-EYGGGIAVTG-------XXXXXXXXXXXXXXXXXXXXXXXXVTGDG---SVTFEKPEVVRISDNTLLANEYNPDPITGCSLAYVE-GNETTVVGFDFDD---ICQE 393          
BLAST of mRNA_D-dichotoma_M_contig924.19978.1 vs. uniprot
Match: A0A6H5J6U2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6U2_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 7.080e-20
Identity = 47/87 (54.02%), Postives = 63/87 (72.41%), Query Frame = 0
Query:   21 RADCDELK-AISLPLTGDLTVTLTEANAPCDNIAEGELEDFVIEGGALTLTGLDVATFSNVRFTVMDGASLIFDFDKTEFGPNSDFV 106
            RA CD+L+ A+S PLTGD T+ L+  +A C  + + ELE+F +EGG LTLTG     F+N++FT+MD A LIFD+D TEFGPN  +V
Sbjct:    5 RASCDDLRSALSSPLTGDTTLELS-GDADCPILEDNELEEFTVEGGTLTLTGPSTTKFTNLKFTIMDQAGLIFDYDTTEFGPNLGYV 90          
BLAST of mRNA_D-dichotoma_M_contig924.19978.1 vs. uniprot
Match: A0A6H5JB77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB77_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 3.770e-18
Identity = 107/309 (34.63%), Postives = 135/309 (43.69%), Query Frame = 0
Query:  115 MMEIMEGGYVEFTGEFLATGLRNYFSIFRNE--GTLEFKSDAEFLEPGTNCFRVNTGKLRFRGNLNIVDAIFLGIRNEGGTVRVAGDSYFENVGSSFDGADGAAVANFDDGIAIFDGTAVFYDMFSQENGGAVFNEGKMKFYSKARFFENRAGIDGGAVYNSNGV------------------------------LKFFGAVQMIDNIASDNGGALGVGGGGEVRFSRXXXXXXXXXXXXXXXXXXXXXGNFEDDGEPSSVEFRKPTKVRFEGNVKTGTELGCNSIFVEDGSEIIGYPVDDDVDICEES 391
            M++++ GG VEF GE  ATGL N  S+F NE  G++E                     LRF G+    + I+L I N+GG+VR+ G++ F   G SFDG  G   +N D GIAIF G A+F      E+                                                                  LKF GAV+   N                     XXXXXXXXXXXXXXXXXX   G+  D G  S +EFRKP +V    N KTG ELGCNS++V++ S IIG+ VDD   +CEES
Sbjct:    1 MVQVLTGGSVEFLGEMAATGLANMRSVFYNEAGGSIE---------------------LRFYGDATFTNNIYLAIDNDGGSVRINGEATFVENGRSFDGHSGGGFSNTDGGIAIFRGPALFSSNTCDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKFRGAVRATGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVVGS-SDGG--SVIEFRKPARVDISINEKTGDELGCNSVYVDETSSIIGFNVDD---VCEES 282          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig924.19978.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G262_ECTSI2.500e-5649.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FHY2_ECTSI2.050e-2938.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J6U2_9PHAE7.080e-2054.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JB77_9PHAE3.770e-1834.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..391
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.531
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 161..364

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig924contigD-dichotoma_M_contig924:150945..169061 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig924.19978.1mRNA_D-dichotoma_M_contig924.19978.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig924 149813..169302 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig924.19978.1 ID=prot_D-dichotoma_M_contig924.19978.1|Name=mRNA_D-dichotoma_M_contig924.19978.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=392bp
MKLIYGAAVGCVLAATSAIVRADCDELKAISLPLTGDLTVTLTEANAPCD
NIAEGELEDFVIEGGALTLTGLDVATFSNVRFTVMDGASLIFDFDKTEFG
PNSDFVVEDNYGEFMMEIMEGGYVEFTGEFLATGLRNYFSIFRNEGTLEF
KSDAEFLEPGTNCFRVNTGKLRFRGNLNIVDAIFLGIRNEGGTVRVAGDS
YFENVGSSFDGADGAAVANFDDGIAIFDGTAVFYDMFSQENGGAVFNEGK
MKFYSKARFFENRAGIDGGAVYNSNGVLKFFGAVQMIDNIASDNGGALGV
GGGGEVRFSRWVTMVNNTASGTGGAMIVGASGNFEDDGEPSSVEFRKPTK
VRFEGNVKTGTELGCNSIFVEDGSEIIGYPVDDDVDICEES*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence