mRNA_D-dichotoma_M_contig1008.148.1 (mRNA) Dictyota dichotoma ODC1387m male
Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig1008.148.1 vs. uniprot
Match: A0A6H5JCK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK9_9PHAE) HSP 1 Score: 103 bits (256), Expect = 1.090e-23 Identity = 51/89 (57.30%), Postives = 67/89 (75.28%), Query Frame = 1 Query: 4 NAFRRALR-GDSPARVEPMRVQLKPGASAVKAKPRRYDPVKSSWLASCVAALLAFGLEFRNLQAEWSSPAMAVPKKDSFRLVSDYKALN 267 NAFR +R GD PA VEP+RV LKPGA VKA+PR Y+P+K++WLA C+A+ + GL F N+QA +S AMA PKK +RL+SD++A N Sbjct: 513 NAFRPGMRPGDPPANVEPLRVTLKPGALPVKARPRTYNPIKTAWLAGCMASPVVLGLVFLNMQAVSASAAMATPKKGGYRLLSDFRAAN 601
BLAST of mRNA_D-dichotoma_M_contig1008.148.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 1.430e-20 Identity = 47/92 (51.09%), Postives = 63/92 (68.48%), Query Frame = 1 Query: 4 NAFRRALRGDSPARVEPMRVQLKPGASAVKAKPRRYDPVKSSWLASCVAALLAFGLEFRNLQAEWSSPAMAVPKKD----SFRLVSDYKALN 267 N FRR +RGD PA V PM V+LK GA VKA+ R Y+P K+ WL +C+AAL+A GL + NLQA W+S M PK+ ++R V D++A+N Sbjct: 631 NVFRRGVRGDPPANVPPMTVKLKTGAKPVKARLRTYNPDKTKWLTTCLAALVALGLVYVNLQAIWASAIMLTPKRSGDKVTYRFVGDFRAVN 722
BLAST of mRNA_D-dichotoma_M_contig1008.148.1 vs. uniprot
Match: A0A2P4XAG4_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XAG4_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.820e-12 Identity = 37/92 (40.22%), Postives = 56/92 (60.87%), Query Frame = 1 Query: 4 NAFRRALRGDSPARVEPMRVQLKPGASAVKAKPRRYDPVKSSWLASCVAALLAFGLEFRNLQAEWSSPAMAVPK----KDSFRLVSDYKALN 267 + +R L D PA+VEP+R++LK GASAVK++PR+Y P ++L A L+ G + N + W+SP + V K KD +R DY+ +N Sbjct: 474 DVWRLDLGNDPPAKVEPLRIRLKSGASAVKSRPRQYPPAVRTFLKDFNAKLVDLGWVYENPNSRWASPVLPVRKAGVSKDEYRQTCDYRLVN 565
BLAST of mRNA_D-dichotoma_M_contig1008.148.1 vs. uniprot
Match: A0A6A3KVD3_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3KVD3_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 3.670e-10 Identity = 33/88 (37.50%), Postives = 51/88 (57.95%), Query Frame = 1 Query: 10 FRRALRGDSPARVEPMRVQLKPGASAVKAKPRRYDPVKSSWLASCVAALLAFGLEFRNLQAEWSSPAMAV--PKKDSFRLVSDYKALN 267 +R L D PARV P++++LK GA+ + K R+Y P KS++L S L+ G + N ++ W PA+ + P D FR +DY+ N Sbjct: 550 WRLELGNDPPARVPPLKIKLKAGATPYRCKVRQYSPSKSAFLESFNRKLVELGWVYENRESRWCCPALPIKKPNIDEFRQTTDYRPFN 637
BLAST of mRNA_D-dichotoma_M_contig1008.148.1 vs. uniprot
Match: A0A6A4Z9W7_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z9W7_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 6.800e-10 Identity = 35/90 (38.89%), Postives = 51/90 (56.67%), Query Frame = 1 Query: 4 NAFRRALRGDSPARVEPMRVQLKPGASAVKAKPRRYDPVKSSWLASCVAALLAFGLEFRNLQAEWSSPAMAVPKKD--SFRLVSDYKALN 267 + FR D P +VEP++VQLKPG+ VK+ RRY P ++L V L GL +RN ++ W++ VPKKD R+ D + +N Sbjct: 470 DVFRLKFGRDPPVKVEPLKVQLKPGSVPVKSGLRRYPPTHVAYLEKHVRELEEAGLVYRNTRSRWAAAPRIVPKKDPGDLRMTIDSRPIN 559
BLAST of mRNA_D-dichotoma_M_contig1008.148.1 vs. uniprot
Match: H3H656_PHYRM (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H656_PHYRM) HSP 1 Score: 62.8 bits (151), Expect = 1.750e-9 Identity = 31/76 (40.79%), Postives = 47/76 (61.84%), Query Frame = 1 Query: 4 NAFRRALRGDSPARVEPMRVQLKPGASAVKAKPRRYDPVKSSWLASCVAALLAFGLEFRNLQAEWSSPAMAVPKKD 231 ++FR D P RV PM+V+LKPGA+ ++A+PRRY P ++L L+ GL F+N ++ W+S V KK+ Sbjct: 641 DSFRLEFGHDPPVRVAPMQVRLKPGATPIRAQPRRYSPNDRAFLDRHTTTLMKHGLIFKNHRSRWASAPRIVKKKE 716
BLAST of mRNA_D-dichotoma_M_contig1008.148.1 vs. uniprot
Match: H3H4S7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H4S7_PHYRM) HSP 1 Score: 62.8 bits (151), Expect = 1.780e-9 Identity = 31/76 (40.79%), Postives = 47/76 (61.84%), Query Frame = 1 Query: 4 NAFRRALRGDSPARVEPMRVQLKPGASAVKAKPRRYDPVKSSWLASCVAALLAFGLEFRNLQAEWSSPAMAVPKKD 231 ++FR D P RV PM+V+LKPGA+ ++A+PRRY P ++L L+ GL F+N ++ W+S V KK+ Sbjct: 643 DSFRLEFGHDPPVRVAPMQVRLKPGATPIRAQPRRYSPNDRAFLDRHTTTLMKHGLIFKNHRSRWASAPRIVKKKE 718
BLAST of mRNA_D-dichotoma_M_contig1008.148.1 vs. uniprot
Match: A0A225UZC5_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UZC5_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 1.130e-8 Identity = 33/88 (37.50%), Postives = 52/88 (59.09%), Query Frame = 1 Query: 10 FRRALRGDSPARVEPMRVQLKPGASAVKAKPRRYDPVKSSWLASCVAALLAFGLEFRNLQAEWSSPAMAV--PKKDSFRLVSDYKALN 267 +R L D PA+V P+ V+LK GA++ + KPR+Y P ++L A L G + N Q+ W+S A+ V P + +R SDY+++N Sbjct: 487 WRLKLGNDPPAKVPPLLVRLKDGATSQRCKPRQYPPHLRAFLRDFNAELERMGWVYENPQSRWASAALPVKKPGSEEYRQTSDYRSVN 574
BLAST of mRNA_D-dichotoma_M_contig1008.148.1 vs. uniprot
Match: A0A225UMF8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UMF8_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 9.550e-8 Identity = 29/86 (33.72%), Postives = 49/86 (56.98%), Query Frame = 1 Query: 16 RALRGDSPARVEPMRVQLKPGASAVKAKPRRYDPVKSSWLASCVAALLAFGLEFRNLQAEWSSPAMAV--PKKDSFRLVSDYKALN 267 +A+ D PA+V P+ ++LK GA+ + KPR+Y P +L L+ G F N + W+ PA+ P K+++R +DY+ +N Sbjct: 4 KAVENDPPAKVPPLDIRLKKGATPCRCKPRQYPPRLREFLKEFNDELVHLGWVFENPPSRWACPALPAHKPGKENYRQTNDYQPVN 89
BLAST of mRNA_D-dichotoma_M_contig1008.148.1 vs. uniprot
Match: A0A329RAD8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RAD8_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 1.300e-7 Identity = 32/91 (35.16%), Postives = 52/91 (57.14%), Query Frame = 1 Query: 4 NAFRRALRGDSPARVEPMRVQLKPGASAVKAKPRRYDPVKSSWLASCVAALLAFGLEFRNLQAEWSSPAMAVPK---KDSFRLVSDYKALN 267 + +R A+ D PA+VEP+RV LKP A ++ PR+Y +++ ++ V +L+ GL +N + W+ + V K D FRL DY +N Sbjct: 86 DVWRAAVGPDPPAKVEPLRVTLKPDAVPYRSPPRKYASLQAQFIREYVKSLVDNGLVEQNNSSRWAWAVVPVHKPGTSDKFRLTIDYSLIN 176 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1008.148.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig1008.148.1 >prot_D-dichotoma_M_contig1008.148.1 ID=prot_D-dichotoma_M_contig1008.148.1|Name=mRNA_D-dichotoma_M_contig1008.148.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=90bp VNAFRRALRGDSPARVEPMRVQLKPGASAVKAKPRRYDPVKSSWLASCVAback to top mRNA from alignment at D-dichotoma_M_contig1008:64952..65221+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig1008.148.1 ID=mRNA_D-dichotoma_M_contig1008.148.1|Name=mRNA_D-dichotoma_M_contig1008.148.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=270bp|location=Sequence derived from alignment at D-dichotoma_M_contig1008:64952..65221+ (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig1008:64952..65221+ >mRNA_D-dichotoma_M_contig1008.148.1 ID=mRNA_D-dichotoma_M_contig1008.148.1|Name=mRNA_D-dichotoma_M_contig1008.148.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=540bp|location=Sequence derived from alignment at D-dichotoma_M_contig1008:64952..65221+ (Dictyota dichotoma ODC1387m male)back to top |