prot_D-dichotoma_M_contig1105.924.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig1105.924.1
Unique Nameprot_D-dichotoma_M_contig1105.924.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length115
Homology
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BLAST of mRNA_D-dichotoma_M_contig1105.924.1 vs. uniprot
Match: D7FVF3_ECTSI (GBF1, ArfGEF protein of the BIG/GBF subfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVF3_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 6.590e-12
Identity = 44/84 (52.38%), Postives = 56/84 (66.67%), Query Frame = 0 
Query:    1 MVMVAAHMGLLGGPNASGNTGAGDSSGVRRESQGGGS--SDPERLLYLTGQILDPVCSGLQPLLRGLAGDS----DFLAHDPPP 78
            +VMV A+ GLLGG +  G+TG GD+SG      GGGS   DP+RLL+ T +IL+PVC GL+PLL+GLAG      + L   PPP
Sbjct: 1708 LVMVVAYAGLLGGQHVLGDTGPGDASG------GGGSRGGDPQRLLHETREILEPVCPGLRPLLKGLAGTGTTTPEALDSQPPP 1785
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BLAST of mRNA_D-dichotoma_M_contig1105.924.1 vs. uniprot
Match: A0A6H5JJL6_9PHAE (SEC7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJL6_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 1.300e-9
Identity = 39/68 (57.35%), Postives = 48/68 (70.59%), Query Frame = 0 
Query:    1 MVMVAAHMGLLGGPNASGNTGAGDSSGVRRESQGGGS--SDPERLLYLTGQILDPVCSGLQPLLRGLA 66
            MVMV A+ GLLGG +   +TG GD+SG      GGGS   DP RLL+ T +IL+PVC GL+PLL+GLA
Sbjct: 1740 MVMVVAYAGLLGGQHVLDDTGPGDASG------GGGSRGGDPRRLLHETREILEPVCPGLRPLLKGLA 1801
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1105.924.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FVF3_ECTSI6.590e-1252.38GBF1, ArfGEF protein of the BIG/GBF subfamily n=1 ... [more]
A0A6H5JJL6_9PHAE1.300e-957.35SEC7 domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig1105contigD-dichotoma_M_contig1105:197643..201999 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig1105.924.1mRNA_D-dichotoma_M_contig1105.924.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig1105 197643..202019 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig1105.924.1 ID=prot_D-dichotoma_M_contig1105.924.1|Name=mRNA_D-dichotoma_M_contig1105.924.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=115bp
MVMVAAHMGLLGGPNASGNTGAGDSSGVRRESQGGGSSDPERLLYLTGQI
LDPVCSGLQPLLRGLAGDSDFLAHDPPPEPRGGVERAGIRDSNAPHDARS
RPAQARSDGGEIELS
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