mRNA_D-dichotoma_M_contig1102.905.1 (mRNA) Dictyota dichotoma ODC1387m male
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Overview
Homology
BLAST of mRNA_D-dichotoma_M_contig1102.905.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 311 bits (796), Expect = 2.230e-102 Identity = 152/230 (66.09%), Postives = 180/230 (78.26%), Query Frame = 1
Query: 61 MTVEIALSIPPDKSRVPKGVLGPITERYGVGSDYPRKHWAECKAQIDETGELDLSNKTRSGCLSLCTPTTAAALRTINKSNRPFTLRQVSDQLKAIGLDYSSSTVRRWFAAEGAHKVVRRIKPSLSDAQKKRRIDFICDQVDETAGNYLDMGNVIHLDESWFFLLRDKEKVRMFPGEEIPASPRVQHKSYLPKIMVIVASGRPDPSHYFDGKIGIWRICVMKTAERSSKK 750
M VEIA+ I P SR+PKGVL PI ERYGVG YP + W K QID T ELDLSN+ RSG SL TP+ AAL+T+N NR TLRQVSDQL +GL++ TVRRWF+ GA K RIKPSLSDAQK+ R+DFI D+VDE G YLD GNV+HLDESWF+L+R+KEKVR+F GE++P PRV H+S+LPKIMVIVA+ RPDP+H FDGKIGIWRICV++TA+RSSKK
Sbjct: 1 MAVEIAMGIQPGFSRIPKGVLDPICERYGVGKKYPSELWKRVKTQIDNTQELDLSNEERSGRPSLLTPSKIAALKTVNSQNRSSTLRQVSDQLTDLGLEFGKDTVRRWFSKLGAAKKAGRIKPSLSDAQKRHRMDFISDRVDEPIGEYLDQGNVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKK 230
BLAST of mRNA_D-dichotoma_M_contig1102.905.1 vs. uniprot
Match: A0A6G0XRQ0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XRQ0_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 2.390e-19 Identity = 72/252 (28.57%), Postives = 118/252 (46.83%), Query Frame = 1
Query: 31 TNVSLGKRYAMTVEIALSIPPDKSR-VPKGVLGPITERYGVGSDYPRKHWAECKAQIDETGELDLS-NKTRSGCLSLCTPTTAAALRT--INKSNRPFTLRQVSDQLKAIGLDYSSSTVRRWFAAEGAHKVVRRIKPSLSDAQKKRRIDFICDQVDETAGNYLDMGNVIHLDESWFFLLRDKEKVRMFPGEEIPASPRVQHKSYLPKIMVIVASGRP----DPSHYFDGKIGIWRICVMKTAERSSKKRKKG 762
TN++ KR A+ + +S D +R P VL I+ ++ + ++ W+ K Q G D++ + + G + TA + + I R T + + I + + ++ IKPSL+ A R+DF +DE + +++M N++HLDE W+FL + + + PGE+ P R Q K Y+ KIM + A RP D S +DGK+G W M A SS++R KG
Sbjct: 5 TNLTNDKREAVLRALLVSRKSDLTRRQPNHVLKEISIKFNCSARTVQRIWSSAKEQGIAQGNFDVNIHNKKKGRVGRKVKYTAEVIHSKLIEMDKRDRTSFRTMSEKTGISVGTLHNCMKNGMFRSHTSA----IKPSLTPANMLARVDFALKAIDEESLAFMEMSNIVHLDEKWYFLTKTSRRFYLLPGEKEPVR-RTQSKRYIGKIMFLSAVSRPCFSSDGSLLWDGKLGTWTFVTMTPALYSSRRRPKG 251
BLAST of mRNA_D-dichotoma_M_contig1102.905.1 vs. uniprot
Match: UPI0019D4F374 (uncharacterized protein LOC120667773 n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D4F374) HSP 1 Score: 94.4 bits (233), Expect = 2.180e-18 Identity = 69/247 (27.94%), Postives = 114/247 (46.15%), Query Frame = 1
Query: 49 KRYAMTVEIALSIPPDKSRVPKGVLGPITERYGVGSDYPRKHWAECKAQIDETGELDLSNKTRSGCLSLCTPTTAAALRTINKSNRPFTLRQVSDQLKAIGLDYSSSTVRRWFAAEGAHKVVRRIKPSLSDAQKKRRIDFICDQVDETA-----GNYLDMGNVIHLDESWFFLLRDKEKVRMFPGEEIPASPRVQHKSYLPKIMVIVASGRPDPSHY----FDGKIGIWRICVMKTAERSSKKRKKG 762
+RYA +L K ++PK + + +K W + QI E+D+SNK C + + I NR TLR + A LD ST+ R F + +KP L ++ K+ R+ F +D+T+ ++DM N++H+DE W+++ + K + P E+ P +Q+K+ + K+M++ GRP + F GKIG+W A R SKKR++G
Sbjct: 89 QRYAAYT--SLHAKSTKGKLPKTATKEVAAFFHTHIRVIQKIWKTAREQIALGLEVDVSNKKTGRCGRKPAEIDVSRITAI-PLNRRSTLRSL-----AKSLDVGISTLHRKFKLGLLRRHSNTLKPHLKESNKRERLQFCISMLDQTSLGDAEPRFIDMQNILHMDEKWYYMTKKARKYYLLPEEDDPER-TIQNKNNIGKVMLLTVVGRPRRNAQGIVMFSGKIGVWAFVKEVPAARRSKKRERG 326
BLAST of mRNA_D-dichotoma_M_contig1102.905.1 vs. uniprot
Match: UPI00142D2D8F (uncharacterized protein LOC117126080 n=1 Tax=Brassica campestris TaxID=3711 RepID=UPI00142D2D8F) HSP 1 Score: 89.4 bits (220), Expect = 6.450e-17 Identity = 65/231 (28.14%), Postives = 113/231 (48.92%), Query Frame = 1
Query: 103 RVPKGVLGPITERYGVGSDYPRKHWAECKAQIDETGELDLSNKTRSGC---LSLCTPTTAAALRTINKSNRPFTLRQVSDQLKAIGLDYSSSTVRRWFAAEGAHKVVRRIKPSLSDAQKKRRIDFICDQVDETA----GNYLDMGNVIHLDESWFFLLRDKEKVRMFPGEEIPASPRVQHKSYLPKIMVIVASGRP----DPSHYFDGKIGIWRICVMKTAERSSKKRKKG 762
++ K V ++ ++ V ++ W + KA + TG++++S++ C PT A+ ++ TLR +S + + S +T+ R E + IKP L +A R+ F +D+ + ++DM N+IH+DE WF++ + EK + P EE P Q K+Y+ K+M + A RP + + FDGKIGI+ ++ A+R SK R G
Sbjct: 83 KLEKNVTKEVSHQFSVSIATVQRIWRQAKATAN-TGKVNVSHRRTENCGRKRITIEPTQVTAVPLCKRT----TLRSMS-----MAMGVSLTTLFRRKKEELIRRHTNSIKPYLKEANITSRLQFCFSMLDKNSLPHEPKFVDMYNIIHIDEKWFYMTKKTEKYYLLPIEEEPQR-SCQSKNYIGKVMFLAAMARPRFDEEGNEVFDGKIGIFPFVTLRPAQRKSKNRDAG 302
BLAST of mRNA_D-dichotoma_M_contig1102.905.1 vs. uniprot
Match: UPI00188F83A1 (uncharacterized protein LOC119300137 n=2 Tax=Triticum dicoccoides TaxID=85692 RepID=UPI00188F83A1) HSP 1 Score: 88.6 bits (218), Expect = 1.890e-16 Identity = 63/205 (30.73%), Postives = 101/205 (49.27%), Query Frame = 1
Query: 175 WAECKAQIDETGELDLSNKTRSGCLSLCTPTTAAALRTINKSNRPFTLRQVSDQLKAIGLDYSSSTVRRWFAAEGAHKVVRRIKPSLSDAQKKRRIDFICDQVDE-TAGN----YLDMGNVIHLDESWFFLLRDKEKVRMFPGEEIPASPRVQHKSYLPKIMVIVASGRP----DPSHYFDGKIGIWRICVMKTAERSSKKRKKG 762
W Q E+D+SNK + C + + TI N+ T+R ++ KA+G+ S +T+ + F + R+KP L++ K+ R+DF +DE T G+ + M N++H+DE WF + + K + P EE P P K+ + K+M + A RP D + F GKIG+W + A + SK R+KG
Sbjct: 84 WETAMKQKGLGQEVDVSNKRKENCGRKSYDDILSLIPTI-PLNKRSTIRSLA---KALGV--SPTTLYKKFKLNKIRRHSNRVKPVLTEKNKRDRVDFCLSMIDEATLGDVSPSFRSMHNIVHIDEKWFSMTKRKRNYYLLPDEEDPERPV---KNSIGKVMFLTAVARPRFDEDGNMTFSGKIGVWPFVRVTAAAKKSKNREKG 279
BLAST of mRNA_D-dichotoma_M_contig1102.905.1 vs. uniprot
Match: UPI000539F855 (uncharacterized protein LOC104753393 n=4 Tax=Camelina sativa TaxID=90675 RepID=UPI000539F855) HSP 1 Score: 86.3 bits (212), Expect = 8.340e-16 Identity = 52/158 (32.91%), Postives = 81/158 (51.27%), Query Frame = 1
Query: 313 TLRQVSDQLKAIGLDYSSSTVRRWFAAEGAHKVVRRIKPSLSDAQKKRRIDFICDQVDETA----GNYLDMGNVIHLDESWFFLLRDKEKVRMFPGEEIPASPRVQHKSYLPKIMVIVASGRP----DPSHYFDGKIGIWRICVMKTAERSSKKRKKG 762
TLR +S +GL + ST+ R + IKPSL D K R+ F +++ ++DM N++H+DE WF++ + EK + P EE+P Q K+Y+ K+M + A RP + + F GKIG++ M+ A+R SK R G
Sbjct: 106 TLRSLS-----MGLGIAQSTLHRHVKEGTIRRHTNAIKPSLKDENMKARLKFCVSMLEKDTLIHGPKFVDMYNIVHIDEKWFYMTKKTEKYYLLPEEEVPHR-TCQSKNYIGKVMFLAAMARPRFDEEGNETFSGKIGVFPFVTMEPAKRRSKNRDAG 257
BLAST of mRNA_D-dichotoma_M_contig1102.905.1 vs. uniprot
Match: UPI00053B7A36 (uncharacterized protein LOC104753193 n=2 Tax=Camelina sativa TaxID=90675 RepID=UPI00053B7A36) HSP 1 Score: 86.3 bits (212), Expect = 1.240e-15 Identity = 69/251 (27.49%), Postives = 115/251 (45.82%), Query Frame = 1
Query: 34 NVSLGKRYAMTVEIALSIPPDKSRVPKGVLGPITERYGVGSDYPRKHWAECKAQIDETGELDLSNKTRSGCLSLCTPTTAAALRTINKSNRPFTLRQVSDQLKAIGLDYSSSTVRRWFAAEGAHKVVRRIKPSLSDAQKKRRIDFICDQVDETA----GNYLDMGNVIHLDESWFFLLRDKEKVRMFPGEEIPASPRVQHKSYLPKIMVIVASGRP----DPSHYFDGKIGIWRICVMKTAERSSKKRKKG 762
NVS +R+A + AL D + + +++ + V RK W K + + G++D+S++ C + TI R TLR AI +D S T+ R + IKP L +A K R++F +D+ ++DM N++H+DE WF++ + K + P E+ P Q K+++ K+M + A RP + + F GKIGI+ ++ A+R SK R G
Sbjct: 66 NVSNQERWA--IFSALLARSDNGNLNRYHTKEVSDLFSVPIQIVRKIWRRAK-ETAKDGKVDVSHRRTGNCGRKKIALDVDKVATIPLQKRT-TLRTF-----AIAMDMSLGTLHRRKKEGAIRRHTNPIKPHLKEANLKGRLEFCISMLDKNTLPHEPKFVDMYNIVHIDEKWFYMTKKTAKYYLLPVEDDPHR-TCQSKNFIGKVMFLAAMARPRFDEEGNEVFSGKIGIFPFVTLEAAKRRSKNRDAG 306
BLAST of mRNA_D-dichotoma_M_contig1102.905.1 vs. uniprot
Match: A0A6H5KQQ9_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQQ9_9PHAE) HSP 1 Score: 86.3 bits (212), Expect = 1.870e-15 Identity = 41/66 (62.12%), Postives = 47/66 (71.21%), Query Frame = 1
Query: 40 SLGKRYAMTVEIALSIPPDKSRVPKGVLGPITERYGVGSDYPRKHWAECKAQIDETGELDLSNKTR 237
+L +RYAM VEIA+ I P SR+PKGVL PI ERYGVG YP K W K QID T ELDLSN+ +
Sbjct: 380 ALERRYAMAVEIAMGIQPGLSRIPKGVLDPICERYGVGKKYPSKLWKRVKTQIDNTQELDLSNEAK 445
BLAST of mRNA_D-dichotoma_M_contig1102.905.1 vs. uniprot
Match: A0A7G2DX18_ARATH ((thale cress) hypothetical protein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=A0A7G2DX18_ARATH) HSP 1 Score: 85.1 bits (209), Expect = 2.590e-15 Identity = 55/162 (33.95%), Postives = 80/162 (49.38%), Query Frame = 1
Query: 301 NRPFTLRQVSDQLKAIGLDYSSSTVRRWFAAEGAHKVVRRIKPSLSDAQKKRRIDFICDQVDETA----GNYLDMGNVIHLDESWFFLLRDKEKVRMFPGEEIPASPRVQHKSYLPKIMVIVASGRP----DPSHYFDGKIGIWRICVMKTAERSSKKRKKG 762
+R T+R V A LD S ST+ R + IKP L + KK R+ F VD + ++DM NV+H+DE WF++ + KE + P EE P Q K+Y+ K+M + A RP + + F GKIGI+ + A+R S R+ G
Sbjct: 85 HRRTTIRSV-----AAALDVSKSTMHRRIKEGNLKRHSNAIKPRLKEDNKKARLQFCLSMVDRCSLPNLPKFVDMYNVVHIDEKWFYMTKKKENYYLHPVEEEPLQ-TCQSKNYITKVMFLAAMARPRFDEEGNEIFSGKIGIFLFVTTQAAKRRSINREAG 240
BLAST of mRNA_D-dichotoma_M_contig1102.905.1 vs. uniprot
Match: A0A6D2JVH0_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JVH0_9BRAS) HSP 1 Score: 84.7 bits (208), Expect = 3.550e-15 Identity = 63/229 (27.51%), Postives = 106/229 (46.29%), Query Frame = 1
Query: 112 KGVLGPITERYGVGSDYPRKHWAECKAQIDETGELDLSNKTRSGCLSLCTPTTAAALRTINKSNRPFTLRQVSDQLKAIGLDYSSSTVRRWFAAEGAHKVVRR----IKPSLSDAQKKRRIDFICDQVDETAGN----YLDMGNVIHLDESWFFLLRDKEKVRMFPGEEIPASPRVQHKSYLPKIMVIVASGRP----DPSHYFDGKIGIWRICVMKTAERSSKKRKKG 762
+G + V +K W K + +D+S++ + C + I R T+R + A+ L+ S ST+ R+ H +VRR IKP+L D KK R+ F +D+ + ++DM N+IH+DE WF++ + + P EE P Q K+++ K+M + A RP + + F GKIG++ M+ A+R S+ R+ G
Sbjct: 24 RGTTKEVANLLAVPKQSVQKIWRRAKDNVSNGEAVDVSHRRKGKCGRKPKEIDLEQIFNIPLHCRT-TMRSI-----AVVLEVSPSTIHRYVK----HGLVRRHSNAIKPTLKDDNKKARVKFCLSMLDKNTFSHQPKFVDMFNIIHIDEKWFYMTKKSTTYYLHPLEEDPVR-SCQSKNFIGKVMFLAAMARPRFDEEGNEIFSGKIGMFPFVTMQEAQRRSRNREAG 241 The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1102.905.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dichotoma_M_contig1102.905.1 >prot_D-dichotoma_M_contig1102.905.1 ID=prot_D-dichotoma_M_contig1102.905.1|Name=mRNA_D-dichotoma_M_contig1102.905.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=257bp MNTPPRRKRGTNVSLGKRYAMTVEIALSIPPDKSRVPKGVLGPITERYGVback to top mRNA from alignment at D-dichotoma_M_contig1102:195782..196552+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dichotoma_M_contig1102.905.1 ID=mRNA_D-dichotoma_M_contig1102.905.1|Name=mRNA_D-dichotoma_M_contig1102.905.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=771bp|location=Sequence derived from alignment at D-dichotoma_M_contig1102:195782..196552+ (Dictyota dichotoma ODC1387m male)back to top Coding sequence (CDS) from alignment at D-dichotoma_M_contig1102:195782..196552+ >mRNA_D-dichotoma_M_contig1102.905.1 ID=mRNA_D-dichotoma_M_contig1102.905.1|Name=mRNA_D-dichotoma_M_contig1102.905.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=1542bp|location=Sequence derived from alignment at D-dichotoma_M_contig1102:195782..196552+ (Dictyota dichotoma ODC1387m male)back to top |