mRNA_D-dichotoma_M_contig1099.847.1 (mRNA) Dictyota dichotoma ODC1387m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dichotoma_M_contig1099.847.1
Unique NamemRNA_D-dichotoma_M_contig1099.847.1
TypemRNA
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1099.847.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig1099contigD-dichotoma_M_contig1099:217801..223131 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size556
Cds size435
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig1099.847.1prot_D-dichotoma_M_contig1099.847.1Dictyota dichotoma ODC1387m malepolypeptideD-dichotoma_M_contig1099 217801..218235 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927603.0186799-CDS-D-dichotoma_M_contig1099:217800..2182351622927603.0186799-CDS-D-dichotoma_M_contig1099:217800..218235Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1099 217801..218235 -
1690798057.6284683-CDS-D-dichotoma_M_contig1099:217800..2182351690798057.6284683-CDS-D-dichotoma_M_contig1099:217800..218235Dictyota dichotoma ODC1387m maleCDSD-dichotoma_M_contig1099 217801..218235 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927603.0404086-UTR-D-dichotoma_M_contig1099:218235..2182631622927603.0404086-UTR-D-dichotoma_M_contig1099:218235..218263Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1099 218236..218263 -
1690798057.6408565-UTR-D-dichotoma_M_contig1099:218235..2182631690798057.6408565-UTR-D-dichotoma_M_contig1099:218235..218263Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1099 218236..218263 -
1622927603.0516326-UTR-D-dichotoma_M_contig1099:223038..2231311622927603.0516326-UTR-D-dichotoma_M_contig1099:223038..223131Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1099 223039..223131 -
1690798057.6493883-UTR-D-dichotoma_M_contig1099:223038..2231311690798057.6493883-UTR-D-dichotoma_M_contig1099:223038..223131Dictyota dichotoma ODC1387m maleUTRD-dichotoma_M_contig1099 223039..223131 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dichotoma_M_contig1099.847.1

>prot_D-dichotoma_M_contig1099.847.1 ID=prot_D-dichotoma_M_contig1099.847.1|Name=mRNA_D-dichotoma_M_contig1099.847.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=145bp
MDCFCGANTEKTVHSCIPPHVYTLNSEAIQDSNTSSLRHRTNLLRSVPMD
GRTIASAKSGKVPYVRDYRESNGDDRDHDPVFRFRRGQRRCFVSIKIGHP
SYPEASLSPSESNQLGSADGEMCQTSFIAIPNLQLCTPSAMAPE*
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mRNA from alignment at D-dichotoma_M_contig1099:217801..223131-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dichotoma_M_contig1099.847.1 ID=mRNA_D-dichotoma_M_contig1099.847.1|Name=mRNA_D-dichotoma_M_contig1099.847.1|organism=Dictyota dichotoma ODC1387m male|type=mRNA|length=5331bp|location=Sequence derived from alignment at D-dichotoma_M_contig1099:217801..223131- (Dictyota dichotoma ODC1387m male)
GTAGAAGATCATACCCGGGCCGGGGAGACCGGAGTTCCAACGACGAACAA
GGCGGCACGGGAGCAGGACTCACCACCGCCGGGAGGACGATCGGTGAGTC
GTTCCCGAAGAACAGGAGATATGAGGTAGGTTACGTGGCAAGGGTAGGAA
GGCCTAGACGACAAAAGCCAGAGTCGGGATGAAACGAACCCTACCTACCG
TCAGAGTCGGACGGGAAGCCGTCAGAAGTGGAGGCGTTTCCGTGTGAGGA
TCACCCTGGGCACTTTGGCGAGGATACTTGTACCCAATCCTCGGGCTTTA
CTTGCGTTCGATTCCAAGCTCTACTTGGAATGCTCCTCTCTAGGCGTCTT
AGGAGGCTCGTCTATGCCTGTAGCAAATGAAGGGAATCAAAACACATGCC
TCCCACTTCCGGCCTCCTTAGTAGTTGAAAACCATCGACGATGCTGAAAA
ACATCCTGTAAGGAAAAAATGGAGTCGAAAGTCCTGGGAAGTTTGACGAG
GTGGCACGTCTCATACGGGGATATCTATGACCGCACCACGGCGGTCGGCA
GAGAGGATGTACAGACGTGGAATGTAGGATACTAAGCCGGGATGTTGATA
AATCGAGCTCAGTCTCAAGCGAGTTCAAGCTTTCCTCCAAATCGATACGG
TGTCCGAAGCGTAGTCTGGGATGGTCTACCATTGCGGTATCCGCCTCAAG
CAGGAGAACTTGCCTTAGGGGGTGCATCGTCTCAATCGATCACCCAGGAC
GGCCGGCGCCCTTGAGCTGCTCTTTATACATGAGGTGTTCGCGGAATAAG
GAGTAAGTTCCGAGGTCGGGATTTATTTGTTTCGCCTTTGTCACACTACA
CGGACGATGACGACGACGAGGAGGAGGAGGACGAGGAGGAGGTGCACGTG
ACTAGACGTTGACCACCATGCGGTGATACGAGAGCATGCACAGCTCCCCT
CGGTTGGATTATTCCTGGGGTAGAATGGATCGCCTAGATAGAGCTACCGA
AGACGCATTTGAACACGTTCGCCGCTCCTTTGCAATTGATCGATCGATCG
ATCAGATGGATAATGGATAATGGATGATGGATGATGGATGATGGTGCACC
TCCTCTTCTTCCGTTAATTTTTCGAGGCCAAAGCATCCCAGGACAATTCG
GGAATATCCTGGAGAGCGGCATGTTTATTTCTTCATGAGTAGGGTGGTTT
GCTTTCACTTTTGTGGCTTTTCGGCGACTTTTGTCACAGTAGCGCCAGTA
ACTGCAGTAACGCCGAGGCTGGAGTTCGATTCGCTCCGTGGATCCAGCTG
ATGCACGTTCCTATTCAGCTCATGCTCTGGATCTCATCAAACCACAAGGC
ACCCTCCCAACGCTTTGGGAATTTCCACGTGAAGCCTGAGAAAATCCTAT
CCCGCAGAGGCTCTCCAGTGAGGTTTGGGTGAACGTTTCCCAACCTTTGA
GAAGGCGTTCTATCTTCCGAGGCAATTCTTATGCCTCTGAGGAATGAAGG
CTGCACTCGGGTATAGGTAAGCGTACTACCGCCATGGAATCTGTGATCAT
AGGCACTTTGGACTAATTTGTTTGAAGAACATCGGAACATCGGAGTGAGA
GCGTACCTGATAAACATAATCCATCATTAGTGCGTCCCATCGTGGTTTAC
GTGGCAAGGAGCTTGAGAGGTTTAGGTACCCGCATGCTGATAGCTGAGTA
TGGTTGAAGGAGGATCGCGCGCTCGTATTCTGGGCGCCTTTCGGATATCA
TATCCTATCCTATCATATTGTATCGTATCCGAATCTGCGGAAGGCATATT
TCGTCGCTCTCCATAAAAATTGCGAGATGTTTGGGATCGCCGTGGTGAGA
ATCAACACAAATTACTGTGAGGTGTAAACCATAGTCCAATTTTCCACAAC
TAAATCGTGTTTTTACGGTGTTGCGTACGGTGTCAAGTATCCTGATTTCG
TGGTTTCTGACGTACGGCGTGGTTCAAAATCCACACGCTGTGTATGAAGG
TTGGATCCCCCTGCTCGGGCCGCGGGGCTTGCTTGGGGCTTCTGACGATC
CTTCTGGGATGCCCCCATCAACCACAACAGAAAGTTCGTGGAATCGCACA
CGTAATTTCCTTCTGGTCCGGTGACGTACGGTCGGAAACCTGTCTGTGTC
TGGAAGACGTGATAGAAAGTCGGGAAGGTGACGAAGAGTCGGAGGGGAAT
GGGCCTTGGCATCGGCCTCGATCGGCATTGGGAAACGCGGCGTTGAGCCG
GAAAGGAGGCACTCGCGATCGAAAGAATGGTTCCGACTGCAAGGAGCTTT
GGGCCACTTGGCGGCGCCTACCGTAGCACACCAACTTTAACCCTTCTAGG
ACTAGACCCAACAGGGTACAGGGTGTTAGATTTATTGTTATTCCGGGGTA
ACGTCCAATACTCTATGAGCCAATCGTCGATGAAACAAGAAGGACCACAA
GGTGGTGTGGAGGAACAATCCGTGAGACAAATAGATTTATCCACACCACC
TTGTGGTCTTTCTTGATTGGTGGATGATTGGGTCATAGACCATAGGATAT
TGGGTATTTCAGTACCTCGGAATTATTATAAAGCCAACACCCTGTACCCT
GTTGGGTTCAGCCCTAGAAGGGTTAACACGGGTTTCAGCGAGCCAAATCT
CATGGAGGACTTCTAGGGGGGGGCTTAATCAAAGGAACCGACCGGTTCTA
CTGTATAGTAGTGCACAAGGGTGTAACGGAGTACGTGAGGAAAAAAACAG
TCCAAACCTGGCTCCACAACATTTCTCACGAATATGGTCGGATCTAAATT
TCATGAAAACATAAAAAACACTTCAAATCTGGCCTGAAAAGTTTGGTAAC
ATTTGTTTGGGGCCAGAGTTGGACTGTTCTTTCCTCACGTATTCCGTTAC
ACCAGTGAGCACCACTGTAGTACCTTCTAGTCGGGCACTCGTCCTGTGAC
GCGCGAGCTGTAGAGCTGTAGCAGGTCAACGTCTTTGGAGAGAGCTGCTC
TCTAGGGGTTGTACGGCGATAACTCCTGCGTGCCACTTTCATCCCGCGAC
GGCGGCCTCGAGGTGGAGATCACCGCGGTGATCCCACGAACGTAGACCCC
ACAAGCGGGAGAAGGCTTCAGCTCATATGTTATTCAGGGCAAGCATTCTT
CTTGTCGCGTACCGTCATCTACTGTCTCCCAGGCGAGTCGTTTTTCGATG
CTTGCAACAAGGAAAAAACGACTTTGGGCCACGCGTGCCCGCATCTAGTC
TTCAGCCGGTCAGGGATCCAAGTTGGCTTATACTCCACTGCTGCATAGAA
CGTGAGCATGCATTGTGTGTTTTGTCATCCGCCCATCTCCTTTATGTTCC
CTTGAAACGCTCTCGTAAGGTCGAGCGCGCGGAACCATGTTCGCTAGAAA
TGGTCCGGAGAAGGTTCTCGGAAATACAGTTCGTTTTTTCTCTTTCTCTC
TCTCTCACGCACGGCTCTCTTTTCATTTACCTCTTTCTAAATAGGCGAGA
CCCTGAAAGTACCCGTTTCCGATGGGAGAGGCGATTCATAAATCGAGACG
CAACTCTTTCCTCGGAAACGGGTACTTTCCCAATATACACACTGGGGGGA
ACGAGAATGGCAGCGCCTCGAAATACGAAAGGGGTGGGACTAATGTCCTT
GTGGGATGGATGACGACCCGGATAGGACTTATGATGCTAGGGCGCTCTCG
AGGCCCTCCTGCCTGCCGCTGCCGCTTGTCTGTCAAGAATTGCACTCAAC
AGCACTCAACAGCACTCCATAGCACTCCATAGCACTCCATAGCCCTCGCC
CACTTCACCAACAGAGGGTTTCTCGTCTACAGCCAGGCATCCTTGTGCCC
CTATTCGCGGCATCGGGCACTTTTGGCTGAGCGGAGACGGCGAATGTTTC
CCCTTGCGCAATGAACTTCCTTACCATAGTCGTTCCGGGTGGTGGTATCT
GGTGCGTGAGTGTCCTCCCCATTGTACCATTGTGCATCCCGAAGAACCGA
AGTTTGGGCTTTAATGGCGTCTTAAACCACTCTTAACCCTTTTGATACTC
CGGTTGGTCCTTATTGGTCCTTATTGCCCGACCCCCCGAAGGAAATGCCG
GGCAGGAAAGAGAACTCTTTGAAGTAATGTTCCATGAAGAGCGTATAGGA
AAAATCAATGTAACTCATGTCGGGCATCTTACTCTATTAATAGGTGTATC
TAGTCAGATCGGTCGGGGTAACGGGGACGGAATTATTCCTCTAGGCGTCT
TAAGGGTTATACCGCTCTTTTTCAAGTACAACTGCTGTGCACGGGTTGAT
AATTCATATCTCGTCGCGAAACTACGGTAGTTTCAGACCCGCGGCATCAG
GTGGGGTCAAAGGACGAGGGGGGCAAAGCTCCGGTTCGCTGCATGCGGAA
TACTGCAGGCAAACTGCCTGCGCCCAATGGCCCACCCAAAGCTAGTTTCG
TAGAGCTTGGGGTGCGCCGAGAGGAGTATTCATATTCGCCACTTCTCGTG
AGACAAGTGGTTGACGTTCAACGGGGAAAGACAAGAACCAGCTGTATACC
AGCAAGACATGACGGCAGCTCGTTGTGCGGGAGAAGAAGCCTTCAAAGAA
TAATCTGCTTTCTGGCACCGCACGGTGCCAGTCCCAAGGAGTGCGATGCT
TTTTGCTTGGTCGGGGTCAAGGTTGTTTGGATCCGGGGGTCCTCATTACC
TGAAGCCTCGTGTGCTCATTCACCATCCTGATGCTGAGTCCTGCAATGCT
ATGCGACGTCCGTCCTTGTTTGCTGTCTCGCCATCTCGTCCATTGAATTC
TGTGCTTGATTGCCGGGGCACTTGCTCATGTTCACGCCGGACAACCTCGC
CTCGCCACGTGTGCCAAGGAACCATTGGAAGGTGAGACAACACACGATGG
ATTGCTTTTGTGGCGCGAACACCGAGAAGACCGTGCATAGTTGTATCCCT
CCTCACGTGTACACCCTGAACAGTGAGGCTATACAGGACTCCAATACTAG
CTCGTTACGGCATCGTACCAACCTCTTGAGGTCGGTTCCCATGGACGGAC
GGACCATTGCGTCCGCGAAATCCGGCAAGGTACCCTACGTGCGCGATTAT
CGAGAATCAAACGGAGACGATCGTGATCATGATCCAGTGTTTCGATTTCG
TCGAGGGCAGAGGAGATGTTTTGTTTCGATCAAAATCGGTCACCCCTCTT
ACCCGGAAGCAAGCCTTAGTCCTTCCGAATCGAACCAGTTAGGTAGCGCG
GATGGCGAAATGTGTCAAACGTCCTTCATTGCGATCCCGAATCTTCAACT
CTGCACACCTTCGGCGATGGCTCCCGAATGA
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Coding sequence (CDS) from alignment at D-dichotoma_M_contig1099:217801..223131-

>mRNA_D-dichotoma_M_contig1099.847.1 ID=mRNA_D-dichotoma_M_contig1099.847.1|Name=mRNA_D-dichotoma_M_contig1099.847.1|organism=Dictyota dichotoma ODC1387m male|type=CDS|length=870bp|location=Sequence derived from alignment at D-dichotoma_M_contig1099:217801..223131- (Dictyota dichotoma ODC1387m male)
ATGGATTGCTTTTGTGGCGCGAACACCGAGAAGACCGTGCATAGTTGTAT
CCCTCCTCACGTGTACACCCTGAACAGTGAGGCTATACAGGACTCCAATA
CTAGCTCGTTACGGCATCGTACCAACCTCTTGAGGTCGGTTCCCATGGAC
GGACGGACCATTGCGTCCGCGAAATCCGGCAAGGTACCCTACGTGCGCGA
TTATCGAGAATCAAACGGAGACGATCGTGATCATGATCCAGTGTTTCGAT
TTCGTCGAGGGCAGAGGAGATGTTTTGTTTCGATCAAAATCGGTCACCCC
TCTTACCCGGAAGCAAGCCTTAGTCCTTCCGAATCGAACCAGTTAGGTAG
CGCGGATGGCGAAATGTGTCAAACGTCCTTCATTGCGATCCCGAATCTTC
AACTCTGCACACCTTCGGCGATGGCTCCCGAATGAATGGATTGCTTTTGT
GGCGCGAACACCGAGAAGACCGTGCATAGTTGTATCCCTCCTCACGTGTA
CACCCTGAACAGTGAGGCTATACAGGACTCCAATACTAGCTCGTTACGGC
ATCGTACCAACCTCTTGAGGTCGGTTCCCATGGACGGACGGACCATTGCG
TCCGCGAAATCCGGCAAGGTACCCTACGTGCGCGATTATCGAGAATCAAA
CGGAGACGATCGTGATCATGATCCAGTGTTTCGATTTCGTCGAGGGCAGA
GGAGATGTTTTGTTTCGATCAAAATCGGTCACCCCTCTTACCCGGAAGCA
AGCCTTAGTCCTTCCGAATCGAACCAGTTAGGTAGCGCGGATGGCGAAAT
GTGTCAAACGTCCTTCATTGCGATCCCGAATCTTCAACTCTGCACACCTT
CGGCGATGGCTCCCGAATGA
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