prot_D-dichotoma_M_contig1086.735.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig1086.735.1
Unique Nameprot_D-dichotoma_M_contig1086.735.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length405
Homology
BLAST of mRNA_D-dichotoma_M_contig1086.735.1 vs. uniprot
Match: D8LET4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LET4_ECTSI)

HSP 1 Score: 327 bits (838), Expect = 3.820e-106
Identity = 188/385 (48.83%), Postives = 249/385 (64.68%), Query Frame = 0
Query:    2 SAYEDNRFKGVDPFPAYIREMGVTSGLLCLYGCITLVQGVYDIVPATIDGQDWSGDSDTYPPVVRHLAALVQIVFSLTSIAVGFQWLVSGTGSKSWARLSVWLSLLSVFTFAVTVSYVSFLAAKDEEESYFIPYIYHPSKTENRVVATLGALGYIAYAGNNFGALIHLNIKMWRFLSESWTGYNRAFYRSLFLLFGLFVFVAGAAQLILGVYVYDEVEDQRLRQ----IVLVGPYHLTYPEISMTVGSLQVVLSFYIFRRAMTTPPDDGSACQA-GQDTFRKFAWFVLLLNISAQVLTQAAFAAGKTGDEDPIMEPVDSLSPMAGFAAMVLVLVMGLGLFPIYLDAMYFTTPADVPG----GCISAAPVREKGAVDEERKVETMS 377
            S Y DNR  G+DPF  Y +EM VT+G+LCL+G I LV GVYD+  +TIDGQDWSG+SD +PPVVRHLAAL+QI FS+ S+AVGFQ+LV G     W  +S++ S  S+FTFAV+V+Y  FL+AK+  +  FIP  Y  S +ENR VA++ A+ Y+AYA NNF AL+HLN KM+ + S+ W G+NR FY++  +  GL   +AG  QL LG YV+D+V++ RL      I L GP  +TY  +++  G+ Q+VL  YI  RA T  P  GS   A G   F+  AWFVL+L+I  QVL+Q   ++  T   D            AGFAA  +  V+GLGLFP+YLDAMY+TTP  +      G +SA   + KG + EERKVE+ S
Sbjct:    3 SGYGDNRLLGLDPFGRYTKEMSVTAGMLCLFGFINLVPGVYDLCLSTIDGQDWSGNSDVFPPVVRHLAALIQITFSIVSMAVGFQYLVCGGACSHWTMISLFCSFFSLFTFAVSVAYTGFLSAKESFD--FIPSEYGASTSENRSVASMIAIAYVAYAINNFFALVHLNYKMFMYQSDQWVGFNRGFYKTALMFVGLLTLLAGTVQLALGAYVFDKVDEDRLSSPLGAIFLSGPLLVTYSRLAIAFGAFQLVLGCYIMVRA-TQKPSSGSGENAKGLQAFQFAAWFVLVLSICIQVLSQVTMSSTSTNIVDRY----------AGFAAQAVAYVVGLGLFPMYLDAMYYTTPETIDQNDFCGDVSAWS-KGKGDI-EERKVESAS 372          
BLAST of mRNA_D-dichotoma_M_contig1086.735.1 vs. uniprot
Match: A0A7S2UB49_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UB49_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 3.150e-16
Identity = 82/316 (25.95%), Postives = 138/316 (43.67%), Query Frame = 0
Query:   63 PVVRHLAALVQIVFSLTSIAVGFQWLVSGTGSKSWARLSVWLSLLSVFTFAVTVSYVSFLAAKDEEESYFIPYIYHPSKTENRVVATLGALGYIAYAGNNFGALIHLNIKMWRFLSESWTGYNRAFYRSLFLLFGLFVFVAGAAQLILGVYVYDEVEDQRLRQ-IVLVGPYHLTYPEISMTVGSLQVVLSFYIFRRAMTTPPDDGSACQAGQD--TFRKFAWFVLLLNISAQVLTQAAFAAGKTGDEDPIMEPVDSLSPMAGFAAMVLV-LVMGLGLFPIYLDAMYFTTPADVPGGCISAAPVREKGAVDEERKVE 374
            P+   +A   Q  F   ++  G+  LV   G KS     +  + L+   +   +S +    AK      FIP  Y PS+ +   VA +G LG IA+     G+L  +   ++ + S      N ++Y     L+   V +AG +QL LG +V   + +  L +  V VG Y + +PEIS+ VG +Q+++ F+   R M            G+D  +F+     + +  +  +++ Q A+A G                PM G AA     ++ GL   P YLDA   TTPA++P    S          +++ K++
Sbjct:   65 PLSNLIAGCAQAFFGTIAMFTGYLSLVYDWGHKSLTLALIIATQLAWLPYLTALSGI----AKGARNDSFIPSAYDPSEADINFVAAMGMLGIIAHGAAYIGSLAFMEFALYAYQSGKTNDRNSSYYLGRSGLYNFLVVLAGFSQLALGSFVLHSIGNGPLTEGPVNVGVYTIYFPEISVFVGLVQILVGFFGLARRM-------GKLVGGKDDHSFQIACGIMWICMLVLELMVQVAYAPG----------------PMMGGAAPTRACIIFGLAFMPAYLDAKTRTTPAELPPSYYSMEDTSSDMDKNDDEKIQ 353          
BLAST of mRNA_D-dichotoma_M_contig1086.735.1 vs. uniprot
Match: K0TGC2_THAOC (Uncharacterized protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TGC2_THAOC)

HSP 1 Score: 79.7 bits (195), Expect = 9.230e-13
Identity = 80/328 (24.39%), Postives = 134/328 (40.85%), Query Frame = 0
Query:   24 VTSGLLCLYGCITLVQGVYDIVPATIDGQDWSGDSDTYPPVVRHLAALVQIVFSLTSIAVGFQWLVSGTGSKSWARLSVWLSLLSVFTFAVTVSYVSFLAAKDEEESYFIPYIYHPSKTENRVVATLGALGYIAYAGNNFGALIHLNIKMWRFLSESWTGYNRAFYRSLFLLFGLFVFVAGAAQLILGVYVYDEVEDQRLRQIVLVGPYHLTYPEISMTVGSLQVVLSFYIFRRAMTTPPDDGSACQAGQDTFRKFAWFVLLLNISAQVLTQAAFAAGKTGDEDPIMEPVDSLSPMAGFAAMVLVLVMGLGLFPIYLDAMYFTTPADV 351
            +T GL   YG    +  + D   + +             P+   +AA+ Q  F LT + VGF   V   GS     ++     L+   F V +S +      D  E+ FIP +Y PS    + V ++  LG ++YA         ++  M    +      +  ++R    L+   +F+AG  QL LG ++ +   +  L   +    + +  PEIS+T+G LQ+++S     R++   P   S        F+   +F+    +S QVL Q A A G            D+ +  A   A V    +G+ L P +LD      P D+
Sbjct:   31 LTLGLCAAYGAFADIVSLADTAKSGL-------------PLATLIAAVFQGFFGLTCMGVGFTGAVMDKGSTLLTTIAASSIQLAWMPFLVGLSTIGMGIVSDPSENPFIPALYDPSAAAVKFVGSMAFLGLMSYAIGFIXXXXXMSFSMHSIQAGKPQDRSGVYFRGRAKLYNGLLFLAGLVQLALGSFIINTYGNGPLEAPIFAVVFLVFSPEISVTIGLLQMIVSTIGIVRSLREKPAPDSVW------FQTLCFFMYFCMMSMQVLAQVAQAPG------------DAAASAAPTLACV---YLGIALMPAFLDWKMNNLPEDL 324          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1086.735.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LET4_ECTSI3.820e-10648.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2UB49_9STRA3.150e-1625.95Hypothetical protein n=1 Tax=Attheya septentrional... [more]
K0TGC2_THAOC9.230e-1324.39Uncharacterized protein n=2 Tax=Thalassiosira ocea... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 404..404
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 101..124
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 279..300
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 256..278
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..89
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 144..171
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 320..340
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 301..319
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 172..191
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 90..100
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 125..143
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 341..404
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 216..234
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..67
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 192..215
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 235..255
NoneNo IPR availableTMHMMTMhelixcoord: 69..91
NoneNo IPR availableTMHMMTMhelixcoord: 234..256
NoneNo IPR availableTMHMMTMhelixcoord: 149..171
NoneNo IPR availableTMHMMTMhelixcoord: 27..49
NoneNo IPR availableTMHMMTMhelixcoord: 316..338
NoneNo IPR availableTMHMMTMhelixcoord: 100..122
NoneNo IPR availableTMHMMTMhelixcoord: 279..301
NoneNo IPR availableTMHMMTMhelixcoord: 192..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig1086contigD-dichotoma_M_contig1086:115969..133302 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig1086.735.1mRNA_D-dichotoma_M_contig1086.735.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig1086 114896..133311 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig1086.735.1 ID=prot_D-dichotoma_M_contig1086.735.1|Name=mRNA_D-dichotoma_M_contig1086.735.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=405bp
MSAYEDNRFKGVDPFPAYIREMGVTSGLLCLYGCITLVQGVYDIVPATID
GQDWSGDSDTYPPVVRHLAALVQIVFSLTSIAVGFQWLVSGTGSKSWARL
SVWLSLLSVFTFAVTVSYVSFLAAKDEEESYFIPYIYHPSKTENRVVATL
GALGYIAYAGNNFGALIHLNIKMWRFLSESWTGYNRAFYRSLFLLFGLFV
FVAGAAQLILGVYVYDEVEDQRLRQIVLVGPYHLTYPEISMTVGSLQVVL
SFYIFRRAMTTPPDDGSACQAGQDTFRKFAWFVLLLNISAQVLTQAAFAA
GKTGDEDPIMEPVDSLSPMAGFAAMVLVLVMGLGLFPIYLDAMYFTTPAD
VPGGCISAAPVREKGAVDEERKVETMSSSTPAASATGSAVPRTAAKGDHQ
EVPV*
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