prot_D-dichotoma_M_contig999.20583.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig999.20583.1
Unique Nameprot_D-dichotoma_M_contig999.20583.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length207
Homology
[Close]
BLAST of mRNA_D-dichotoma_M_contig999.20583.1 vs. uniprot
Match: D7FHG6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHG6_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 1.340e-59
Identity = 98/137 (71.53%), Postives = 114/137 (83.21%), Query Frame = 0 
Query:   60 EQRTQPATRQGNGMQPLRAAAXXXXXXXXGFVNPYTAFRKWQKEIIESTAKDNDKYPEAFEGLMKEPGMTKEKAERLAKLAVTDPILYSIERRREANELTNTKMDYNKISGFFPMEWIMSGDFGWGYNKKRRRLAEE 196
            +Q  QPA +Q  G+Q L  A+        GFVNPYTAFRKWQ ++IES AK ++KYPEAF GLMKEPGMT EKAERLAKL+V+DPILY+IERRREANE+  TKMDY+KISGFFPMEWIMSGDFGWG+NKK++RLAEE
Sbjct:   43 QQHVQPAIQQ-RGVQVL-GASEEGAGEERGFVNPYTAFRKWQMDLIESKAKGDEKYPEAFAGLMKEPGMTTEKAERLAKLSVSDPILYAIERRREANEINETKMDYDKISGFFPMEWIMSGDFGWGFNKKKKRLAEE 177
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig999.20583.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHG6_ECTSI1.340e-5971.53Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 186..206
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..206
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..34
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig999contigD-dichotoma_M_contig999:232807..245024 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig999.20583.1mRNA_D-dichotoma_M_contig999.20583.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig999 232750..245491 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig999.20583.1 ID=prot_D-dichotoma_M_contig999.20583.1|Name=mRNA_D-dichotoma_M_contig999.20583.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=207bp
MRTSAPVMGGNMIATWLVSVVATFGMFWSSPTHGLLAPGNIVLESGLRSS
SSHLYIFKHEQRTQPATRQGNGMQPLRAAASDDEEGGGGFVNPYTAFRKW
QKEIIESTAKDNDKYPEAFEGLMKEPGMTKEKAERLAKLAVTDPILYSIE
RRREANELTNTKMDYNKISGFFPMEWIMSGDFGWGYNKKRRRLAEEAKRK
KEAEGE*
back to top