prot_D-dichotoma_M_contig997.20570.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig997.20570.1
Unique Nameprot_D-dichotoma_M_contig997.20570.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length701
Homology
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BLAST of mRNA_D-dichotoma_M_contig997.20570.1 vs. uniprot
Match: A0A6H5L7I3_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L7I3_9PHAE)

HSP 1 Score: 196 bits (499), Expect = 1.770e-49
Identity = 98/155 (63.23%), Postives = 117/155 (75.48%), Query Frame = 0 
Query:  352 SPEFRMELECTICFMPIAVIALFACGHGCCWECAHDWCSRGTSATMDCPTCHVSVPRGDFRRCVIFDEVVEREVLASGCGDGSWEKRLSRGKRLAQEAEAKRRSSRDAQRAMEDTISEQAAELERLREEARARAPQRRRFFEQHQPPRGPSDYGF 506
            S E    LEC +CF P+AV ALFACGHG CWECAHDWCSR TS+TMDCPTCHVSVPR DFRRCV+ DEVV+R V A+G  D  W  R+ RG++LA+EAE +RRS RDAQR+ EDTI+EQAAELE+LREEA++R   RR    Q       +++GF
Sbjct:  297 SQELPRILECAVCFNPLAVAALFACGHGSCWECAHDWCSRETSSTMDCPTCHVSVPRSDFRRCVVLDEVVDRAVTAAGMDDDEWRARVERGQKLAREAEGRRRSLRDAQRSAEDTIAEQAAELEKLREEAKSRRVGRRALRAQEGSTSSMAEFGF 451
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig997.20570.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L7I3_9PHAE1.770e-4963.23RING-type domain-containing protein n=2 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 460..484
NoneNo IPR availableCOILSCoilCoilcoord: 25..45
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 357..407
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 346..429
e-value: 1.9E-9
score: 39.1
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 361..403
score: 10.439

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig997contigD-dichotoma_M_contig997:167269..191062 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig997.20570.1mRNA_D-dichotoma_M_contig997.20570.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig997 167056..191625 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig997.20570.1 ID=prot_D-dichotoma_M_contig997.20570.1|Name=mRNA_D-dichotoma_M_contig997.20570.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=701bp
MDQLWSEPGDGGELSGEVRSDADDKDLEEEEEDGSEDEEEDEEDELEMPM
ERPLKRGKHSLAHLSVALGAAGVEGSRGQDGGSSAAIPSDEEEEEDDDGV
VDEEEEDEEDEEEEDDDDDDQEDEKEVIEILDDDEEMEDHEGVARAVSSQ
GDSNPSVPSENDAFKRESIPLPSMFVPSNPHGRDSSSPRSATASARGASS
PSARSNRRDRPSSWSNVPDLEHMLGIRSPSPPSAPQFGVIGHLPRVTRST
PPHDSGASNAGERELNGKLSPEELAASVGGEIRSPAMPIQSGEVEQTRAI
PETVGDGTKNNSLLWSRTPPKTATRADVSSSSASAGATSSTATGDGACSS
TSPEFRMELECTICFMPIAVIALFACGHGCCWECAHDWCSRGTSATMDCP
TCHVSVPRGDFRRCVIFDEVVEREVLASGCGDGSWEKRLSRGKRLAQEAE
AKRRSSRDAQRAMEDTISEQAAELERLREEARARAPQRRRFFEQHQPPRG
PSDYGFRFGSRDPWGGAQSQMEELLVARSIRHRRSEMDGSNVALAQRGAA
GVPSGNAMTGPTVGAVTAEGNAAAAMAALSMPPQGPHLGVRSSGAVHLAP
SHLGPPAASAAPAPMAGAGLARNEPWFSLRPYLSHREGGGNSNGNGGLGV
SGTGEAWGVRRTSPMSRLPRQLLSGAVVAPCRDAGVMVPAAAIQGNVVLR
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING