prot_D-dichotoma_M_contig99.20534.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig99.20534.1
Unique Nameprot_D-dichotoma_M_contig99.20534.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length253
Homology
[Close]
BLAST of mRNA_D-dichotoma_M_contig99.20534.1 vs. uniprot
Match: D7FHE8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHE8_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 5.160e-7
Identity = 34/90 (37.78%), Postives = 51/90 (56.67%), Query Frame = 0 
Query:  167 VIDERVGREQYEDFLDFGLCGRCNRTYRIVMGKRHVQTKGFWTKL---EDELADLQQLISESECRKRAFREA-GEHRSTLMETQSLKLMR 252
            V+D  +  E+   FL FGLCGRC+R +RI  G +HV+ K     +   E +L  L  L++++E  K A R A G H+  L  T+ L+ +R
Sbjct:   10 VVDGSLEYEERAKFLQFGLCGRCDRVFRISQGWKHVEQKSRHETVVDGESKLRHLSTLVAKAEMNKTALRAARGAHKDILEATEKLRALR 99
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig99.20534.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHE8_ECTSI5.160e-737.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 72..99
NoneNo IPR availableCOILSCoilCoilcoord: 208..235

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig99contigD-dichotoma_M_contig99:633690..639772 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig99.20534.1mRNA_D-dichotoma_M_contig99.20534.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig99 633275..639772 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig99.20534.1 ID=prot_D-dichotoma_M_contig99.20534.1|Name=mRNA_D-dichotoma_M_contig99.20534.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=253bp
MVSNERSTEAETTPASVNIQSPQSGRRGVRSPRVRSPNVRSPNVGSPKDR
NSKVKSPKVRSPKVRSPKDTTSPNARSKVEDVQEQREELRVEAATETSLK
ARFESQLGDRVVMVVAVHGPRAPPQRSARSLEGYCILEEEDAAHLAPHNR
ILVKVTLDLMQARNPQVIDERVGREQYEDFLDFGLCGRCNRTYRIVMGKR
HVQTKGFWTKLEDELADLQQLISESECRKRAFREAGEHRSTLMETQSLKL
MRG
back to top