prot_D-dichotoma_M_contig98.20456.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig98.20456.1
Unique Nameprot_D-dichotoma_M_contig98.20456.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length138
Homology
BLAST of mRNA_D-dichotoma_M_contig98.20456.1 vs. uniprot
Match: A0A6H5LAH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAH5_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 5.740e-19
Identity = 44/97 (45.36%), Postives = 67/97 (69.07%), Query Frame = 0
Query:    1 MIFQIQFLSTLNLVDVNMSSSFEGMLDQLKWLNLYFSSDFGVLGCGNENSANEQSDNESGTWVLNTFLVFGILSFLSALRVLLSSYLQSRWLAKLNA 97
            M+FQ+QF+S L +++ N+++ F   LD LKW+NL+F  D   L C  E +  + S++++GTW LNTFLVF +L  L  L +LL SYL++ WL++ NA
Sbjct:  846 MVFQMQFVSLLRMLEANITTPFMNFLDSLKWMNLHFEVDLTFLSCDGEETRFDWSNDDNGTWALNTFLVFSLLLVLIILHILLVSYLEAAWLSQANA 942          
BLAST of mRNA_D-dichotoma_M_contig98.20456.1 vs. uniprot
Match: D7G3P1_ECTSI (Similar to Mucin-1 (MUC-1) (Polymorphic epithelial mucin) (PEM) (PEMT) (Episialin) (Tumor-associated mucin) (Carcinoma-associated mucin) (Tumor-associated epithelial membrane antigen) (EMA) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3P1_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 1.430e-18
Identity = 44/97 (45.36%), Postives = 66/97 (68.04%), Query Frame = 0
Query:    1 MIFQIQFLSTLNLVDVNMSSSFEGMLDQLKWLNLYFSSDFGVLGCGNENSANEQSDNESGTWVLNTFLVFGILSFLSALRVLLSSYLQSRWLAKLNA 97
            M+FQ+QF+S L +++ N+++ F   LD LKW+NL+F  D   L C  E +    S++++GTW LNTFLVF +L  L  L +LL SYL++ WL++ NA
Sbjct:  523 MVFQMQFVSLLRMMEANITTPFMNFLDSLKWMNLHFEVDISFLSCDEEETRFNWSNDDNGTWALNTFLVFFLLLVLIILHILLVSYLEAAWLSQANA 619          
BLAST of mRNA_D-dichotoma_M_contig98.20456.1 vs. uniprot
Match: D8LIK9_ECTSI (Beta strand repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIK9_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 5.040e-18
Identity = 47/95 (49.47%), Postives = 66/95 (69.47%), Query Frame = 0
Query:    1 MIFQIQFLSTLNLVDVNMSSSFEGMLDQLKWLNLYFSSDF-GVLGCGNENSANEQSDNESGTWVLNTFLVFGILSFLSALRVLLSSYLQSRWLAK 94
            MIFQIQFLS+L L++ N+++ F  MLDQLKWLNL+F  DF G  GC +E+S     D ++G W  NTF VFG ++ L    +LL SY+++ WL++
Sbjct: 1019 MIFQIQFLSSLRLLEANITAPFRRMLDQLKWLNLHFDVDFVGFAGCDDEDSFTWTED-DNGMWAFNTFAVFGFMALLILCHILLLSYIEASWLSQ 1112          
BLAST of mRNA_D-dichotoma_M_contig98.20456.1 vs. uniprot
Match: A0A6H5JU12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU12_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 1.850e-6
Identity = 29/49 (59.18%), Postives = 37/49 (75.51%), Query Frame = 0
Query:    1 MIFQIQFLSTLNLVDVNMSSSFEGMLDQLKWLNLYFSSDF-GVLGCGNE 48
            MIFQIQFLS+L L++ N+++ F  MLD+LKWLNL+F  DF G  GC  E
Sbjct: 1907 MIFQIQFLSSLRLLEANITAPFRRMLDRLKWLNLHFDVDFVGFAGCDGE 1955          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig98.20456.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5LAH5_9PHAE5.740e-1945.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3P1_ECTSI1.430e-1845.36Similar to Mucin-1 (MUC-1) (Polymorphic epithelial... [more]
D8LIK9_ECTSI5.040e-1849.47Beta strand repeat-containing protein n=1 Tax=Ecto... [more]
A0A6H5JU12_9PHAE1.850e-659.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..61
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..83
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 84..137
NoneNo IPR availableTMHMMTMhelixcoord: 62..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig98contigD-dichotoma_M_contig98:324774..326167 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig98.20456.1mRNA_D-dichotoma_M_contig98.20456.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig98 324774..326167 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig98.20456.1 ID=prot_D-dichotoma_M_contig98.20456.1|Name=mRNA_D-dichotoma_M_contig98.20456.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=138bp
MIFQIQFLSTLNLVDVNMSSSFEGMLDQLKWLNLYFSSDFGVLGCGNENS
ANEQSDNESGTWVLNTFLVFGILSFLSALRVLLSSYLQSRWLAKLNARNQ
SEDSREESTEEDEQLHDCSRRESILSKHEARADYLRR*
back to top