prot_D-dichotoma_M_contig960.20323.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig960.20323.1
Unique Nameprot_D-dichotoma_M_contig960.20323.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length273
Homology
BLAST of mRNA_D-dichotoma_M_contig960.20323.1 vs. uniprot
Match: A0A6H5KSL6_9PHAE (V-SNARE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KSL6_9PHAE)

HSP 1 Score: 265 bits (677), Expect = 8.700e-86
Identity = 154/242 (63.64%), Postives = 193/242 (79.75%), Query Frame = 0
Query:   28 MEPFGFESGASRSMSSFRVHEENYRRASQAINRHINGLQLKK-VEALAAIDLPAELEEAEQYVKGMEIEVRSMKGNERRQCQSRANQCRADLRALRRSLEQATQRAKAEALLRRGNDGDGSGADRNSSWNSGSGGLEGFGPDAAQQSLASR--SRMSLLDSRRVVDETEAIGQGVIGDLEMQRESLLRSQANMRETGSIASRARRVLRTMARRDFRHRLCLYFVILCLSVAILLVLYTKLQK 266
            MEPFGFESG SR++ +F+ HEE+Y R S +INR ING+QL   V+A+ A  LP +L+EAEQ+VKGMEIE RSMKGNERRQCQSRANQCRADL+ALRRS++QA QRA+AE L+RR   G   G  R  S++ G G L G GPD AQQSLA R  SR+SL DSRRV++ETE IG+GV+GDLE QRESLLRS+A++R+TG+ A +ARR+L +++RR+ RHRLCLY VI  LS AI+ VLY K+++
Sbjct:    1 MEPFGFESGPSRAVQTFQSHEESYHRCSMSINRAINGIQLNNLVDAVGATSLPLDLQEAEQHVKGMEIEARSMKGNERRQCQSRANQCRADLKALRRSIDQAGQRAQAEELMRRSGGGAIGGEPR--SFSEGGGDLRGLGPDLAQQSLARRVLSRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYAVIALLSAAIVFVLYLKIRR 240          
BLAST of mRNA_D-dichotoma_M_contig960.20323.1 vs. uniprot
Match: A0A835ZAL4_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAL4_9STRA)

HSP 1 Score: 122 bits (305), Expect = 4.560e-30
Identity = 99/258 (38.37%), Postives = 135/258 (52.33%), Query Frame = 0
Query:   28 MEPFGFESGASRSMSS----FRVHEENYRRASQAINRHINGLQLKKVEALAA--------------IDLPAEL-EEAEQYVKGMEIEVRSMKGNERRQCQSRANQCRADLRALRRSLEQATQRAKAEALLRRGNDGDGSGADRNSSWNSGSGGLEGFGPDAAQQSLASRSRMSLLDSRRVVDETEAIGQGVIGDLEMQRESLLRSQANMRETGSIASRARRVLRTMARRDFRHRLCLYFVILCLSVAILLVLYTKLQK 266
            M+P   E+   RS +S    F  +E++Y +A++ IN HI+ L   +  A                 +D    L EE+E   +GMEIEVRSM G +R++C ++A Q R+DL ALRR+ +QA  RA  E                              G D   ++LA R+ +SL DSRRV+ ETE +G  V+ DLE QR+SLLR++ N RE       AR VLR +ARRD RHRL LY +I  L  AI  VLY K ++
Sbjct:    1 MQPLDVEAPPPRSSTSTMTIFNSYEDSYLQAARGINAHISALWSLRAAANXXXXXXXXXXXXPERIVDAATRLFEESESLARGMEIEVRSMTGADRKKCGAKAAQYRSDLLALRRAFDQARARAARE-----------------------------LGYDGGGRALA-RTAISLTDSRRVLAETEDVGARVVTDLEGQRQSLLRARDNAREISYDTVEAREVLRAIARRDARHRLALYAIIAALLCAIAFVLYLKFRR 228          
BLAST of mRNA_D-dichotoma_M_contig960.20323.1 vs. uniprot
Match: A0A6U4L7W0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4L7W0_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 3.370e-21
Identity = 77/225 (34.22%), Postives = 114/225 (50.67%), Query Frame = 0
Query:   41 MSSFRVHEENYRRASQAINRHINGLQLKKVEA----LAAIDLPAELEEAEQYVKGMEIEVRSMKGNERRQCQSRANQCRADLRALRRSLEQATQRAKAEALLRRGNDGDGSGADRNSSWNSGSGGLEGFGPDAAQQSLASR-----SRMSLLDSRRVVDETEAIGQGVIGDLEMQRESLLRSQANMRETGSIASRARRVLRTMARRDFRHRLCLYFVILCLSVAI 256
            MS F  +EE Y R ++ +N HIN +  + V A       +    ++ EAE YVK ME+EVRS++G  ++ CQ +  + R DL +L+R +E+A                   G  R +   S +    G     AQ  L +      S   L  +RRV+ +TE +G  ++ +LE Q+E+L+R+  ++RET  I   A+RVLR M  R   H LCLY VIL L   I
Sbjct:    1 MSLFENYEEEYLRCARVLNTHINSISARGVTADRVRTTVVQAEMDVAEAEGYVKAMEVEVRSLRGPVKKSCQQKLERYRNDLGSLKREIERARLTG---------------GGARQAGEVSLAPSQGGMSAQRAQMMLETNDILDESTAQLEQTRRVIADTEQVGDNIMSNLEEQKETLVRAHDDVRETRGITREAQRVLRMMGNRALMHTLCLYVVILILLALI 210          
BLAST of mRNA_D-dichotoma_M_contig960.20323.1 vs. uniprot
Match: W7U7D0_9STRA (Qb-vti1-family n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U7D0_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 3.710e-20
Identity = 82/245 (33.47%), Postives = 124/245 (50.61%), Query Frame = 0
Query:   48 EENYRRASQAINRHINGLQLKKVEA-------------------LAAIDLPAELEEAEQYVKGMEIEVRSMKGNERRQCQSRANQCRADLRALRRSLEQATQRAKAEALLRRGNDGDGSGADRNSSWNSGSGGLEGFGPDAAQQSLASRSRMSLLDSRRVVDETEAIGQGVIGDLEMQRESLLRSQANMRETGSIASRARRVLRTMARRDFRHRLCLYFVILCLSVAILLVL-YTKLQKYFGSDN 272
            +E Y R S+AINR +N L   +++                    +A IDL  +L EAE  VKG+EIEV+ M   ++R C+ +  Q R DL+A+RRS E A  RA+   LL+                      + G   + A++ ++S  ++   D+R+VVDETE IG+G+I  +E QRE L+R+   ++ET      AR+V+  M  R  RH+ CL  +I  L V I +V  Y  L +Y   + 
Sbjct:    2 QEEYYRLSRAINRGLNELTRGRLDGGGSISGGHDTMPPSRLLRLVAEIDL--DLAEAEGQVKGLEIEVQDMPVKDKRMCREKVLQFRNDLKAMRRSFEAAKARAERHMLLQLSQ-------------------VSGKRKNIAERLMSSTEQLH--DARKVVDETEHIGEGIIYQMEAQREQLVRASEQVQETNWFTRSARQVMNNMHLRAVRHKACLILIIGFLLVLIGIVFNYGVLARYHKKNR 223          
BLAST of mRNA_D-dichotoma_M_contig960.20323.1 vs. uniprot
Match: A0A485K772_9STRA (Aste57867_208 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K772_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.710e-12
Identity = 71/229 (31.00%), Postives = 112/229 (48.91%), Query Frame = 0
Query:   34 ESGASRSMSS-FRVHEENYRRASQAINRHINGLQLKKVEALAAIDLPAELEEAEQYVKGMEIEVRSMKGNERRQCQSRANQCRADLRALRRSLEQATQRAKAEALLRRGNDGDGSGADRNSSWNSGSGGLEGFGPDAAQQSLASRSRMSLLDSRRVVDETEAIGQGVIGDLEMQRESLLRSQANMRETGSIASRARRVLRTMARRDFRHRLCLYFVILCLSVAILLVLY 261
            +SG +  M+  F+  EE+Y    + IN  I+ L     + +A+    A + EA++ +K M +E+R      R+  Q++ N  R +L  L+R LE+A   +K                      ++ S G   +    +      R+   L  S+R+V ETE IG  V+  L  QRE+LL +   +++T   A  ARRVL+ M +R   H+L L+FVI+ L  AILLV Y
Sbjct:    2 DSGGANGMTDRFQSLEEDYIDCKRTINNSIHDLSQSDQKQVASQMAQANVVEAQRCIKLMSVELRGKAPAVRKAMQAKINVYRDELAGLQRDLERALLLSKQNVS------------------STSSDGTAQYERLISNTGRLQRASDQLEQSKRIVQETEQIGISVMDTLAQQRETLLSAHEKVKDTRETAGDARRVLQRMTQRVLTHKLTLWFVIVVLVAAILLVFY 212          
BLAST of mRNA_D-dichotoma_M_contig960.20323.1 vs. uniprot
Match: A0A6T7FTV7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7FTV7_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 5.320e-12
Identity = 65/203 (32.02%), Postives = 104/203 (51.23%), Query Frame = 0
Query:   73 LAAIDLPAE-LEEAEQYVKGMEIEVRSMKGNERRQCQSRANQCRADLRALRRSLEQATQRAKAEAL-----------LRRGNDGDGSGADRNSSWNSGSGGLEGFGPDAAQQSLASRSRMSLLDSRRVVDETEAIGQGVIGDLEMQRESLLRSQANMRETGSIASRARRVLRTMARRDFRHRLCLYFVILCLSVAILLVLYTK 263
            L A+D   E   EAE++++ ME  ++S++G ER   +   ++C+ D ++L+  L +A   A +  L           +RRG      G        SG+G  +  GP +A  +   R    L +SRR++ ETE IG  V+GD+E QR  LL +   + ET    S AR+ L TM  R+ +H+  L  +I+ L  +I LVL+ +
Sbjct:   11 LGAVDAAEERFGEAERHLRRMEAAIQSLEGPERTSREQAVSRCKQDFQSLKNELNRALNNADSAELTGMSGGSXXXXVRRG------GGQGYQPPTSGAG--DWGGPSSAPPTTGVRGTELLEESRRIIGETEEIGDQVMGDMENQRHQLLSAHEKVLETRGFISDARQTLSTMGWRELQHKAMLVAIIILLFASICLVLWFR 205          
BLAST of mRNA_D-dichotoma_M_contig960.20323.1 vs. uniprot
Match: A0A024TJZ2_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TJZ2_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.170e-11
Identity = 72/232 (31.03%), Postives = 113/232 (48.71%), Query Frame = 0
Query:   35 SGASRSMSSFRVHEENYRRASQAINRHINGLQLKKVEALAAIDLPAELEEAEQYVKGMEIEVRSMKGNERRQCQSRANQCRADLRALRRSLEQATQRAKAEALLRRGNDGDGSGADRNSSWNSGSGGLEGFGPDAAQQSLASRSRMSLLDSRRVVDETEAIGQGVIGDLEMQRESLLRSQANMRETGSIASRARRVLRTMARRDFRHRLCLYFVILCLSVAILLVLYTKLQK 266
            SG+S     F+  EE+Y    + IN  I+ L       +A+    A + EA++ +K M +E+R      R+  Q++ N  R +L+ L+R L++A   +K  +               ++S          +    A      R+   L  S+R+V ETE IG  V+  L  QRE+LL +   +++T   A  ARRVL+ M++R   H+L L+FVIL L VAI+LV Y    K
Sbjct:    4 SGSSALSDRFQSLEEDYIDCKRTINNSIHDLSSLDQRHVASQMAQANVVEAQRCIKLMSVELRGKTPAVRKVMQAKINVYRDELQGLQRDLDRALLLSKQIS---------------STSXXXXXXXAAQYDRLVANTDRLQRASDQLEQSKRIVQETEQIGISVMDTLAQQRETLLSAHDKVKDTRETAGDARRVLQRMSQRMLTHKLTLWFVILVLIVAIVLVFYHDFIK 220          
BLAST of mRNA_D-dichotoma_M_contig960.20323.1 vs. uniprot
Match: A0A4D9CYM8_9STRA (V-SNARE domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYM8_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 3.820e-11
Identity = 62/185 (33.51%), Postives = 94/185 (50.81%), Query Frame = 0
Query:   48 EENYRRASQAINRHINGLQLKKVEA-------------------LAAIDLPAELEEAEQYVKGMEIEVRSMKGNERRQCQSRANQCRADLRALRRSLEQATQRAKAEALLRRGNDGDGSGADRNSSWNSGSGGLEGFGPDAAQQSLASRSRMSLLDSRRVVDETEAIGQGVIGDLEMQRESLLRS 213
            +E Y R S+AINR +N L   +++                    +A IDL  +L EAE  VKG+EIEV+ M    +  C+ +  Q R DL+A+RRS E A  RA+   LL+                      + G   + A++ ++S  ++   D+R+VVDETE IG+G+I  +E QRE L+R+
Sbjct:   29 QEEYYRLSRAINRGLNELTRGRLDGGGSISGGHDTMPLSRLLRLVAEIDL--DLAEAEGQVKGLEIEVQDMPVKNKSMCREKVLQFRNDLKAMRRSFEAAKARAERHMLLQLSQ-------------------VSGKRKNIAERLMSSTEQLH--DARKVVDETEHIGEGIIYQMEAQREQLVRA 190          
BLAST of mRNA_D-dichotoma_M_contig960.20323.1 vs. uniprot
Match: D8TSD7_VOLCA (Qb-SNARE, VTI1-family n=3 Tax=Volvox TaxID=3066 RepID=D8TSD7_VOLCA)

HSP 1 Score: 70.1 bits (170), Expect = 1.220e-10
Identity = 64/236 (27.12%), Postives = 115/236 (48.73%), Query Frame = 0
Query:   44 FRVHEENYRRASQAINRHINGLQLKKVEALAA--IDLPAELEEAEQYVKGMEIEVRSMKGNERRQCQSRANQCRADLRALRRSLEQATQRAKAEALLRRGNDGDGSGADRNSSWNSGSGGLEGFGPDAAQQSLASRSRM------------SLLDSRRVVDETEAIGQGVIGDLEMQRESLLRSQANMRETGSIASRARRVLRTMARRDFRHRLCLYFVILCLSVAILLVLYTKLQ 265
            F  +E  Y   S  I+R IN       E      +++ A+++EA+  +K M++E RS+     +Q Q++  + +ADL +LR  L +A   A +E    R          +N S        +G G D A  S A R RM             L   ++++ ETE +G G++ +L  QRE ++ S+  +       S+AR++L  M+RR  +++L ++ +I  L   I++++Y K++
Sbjct:    8 FHQYENEYCNKSTDISRKINSAITLSGETKRKKLVEVDADIKEADNIIKKMDMEARSVAPERSKQLQNKVKEYKADLASLREQLTKARTAAGSEYDAARAE------LSQNIS--------QGLGIDYASSSQAQRDRMLSASAKLEQSNDRLQTGKKLLAETEELGSGILANLAAQREVIIHSRDTLHGADDNISKARKILSNMSRRMLQNKLIMFGIIGFLLAGIIIIIYFKVK 229          
BLAST of mRNA_D-dichotoma_M_contig960.20323.1 vs. uniprot
Match: UPI0007381D1F (vesicle transport through interaction with t-SNAREs homolog 1A n=2 Tax=Opiinae TaxID=68883 RepID=UPI0007381D1F)

HSP 1 Score: 69.3 bits (168), Expect = 1.980e-10
Identity = 63/190 (33.16%), Postives = 100/190 (52.63%), Query Frame = 0
Query:   77 DLPAELEEAEQYVKGMEIEVRSMKGNERRQCQSRANQCRADLRALRRSLEQATQRAKAEALLRRGNDGDGSGADRNSSWNSGSGGLEGFGPDAAQQSLASRSRM-----SLLDSRRVVDETEAIGQGVIGDLEMQRESLLRSQANMRETGSIASRARRVLRTMARRDFRHRLCLYFVILCLSVAILLVLY 261
            D+  +LEEA++ ++ ME+EVR   GN+R + +SR    RA+L+ L  S E  T +   E  +  G D          +W+SG         D  ++ L +  R+     +L +  R+V ETE IG  V+ DL  QRE++ RS+  +RET +   R  R+L TM  R  + RL L  V++ L++   +V+Y
Sbjct:   40 DVDRQLEEAQELLEQMELEVRGTSGNQRERLKSRVESHRAELKRL--SQEFQTAKKPKEDAIDMGLD---------DNWDSG------VTEDQRKRLLDTSERIDRTGRTLQNGYRMVLETEEIGSQVLKDLHDQRETIQRSRGRLRETDAELGRGSRLLSTMIFRSIQQRLILAAVVVVLAIVGCIVIY 212          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig960.20323.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSL6_9PHAE8.700e-8663.64V-SNARE domain-containing protein n=2 Tax=Ectocarp... [more]
A0A835ZAL4_9STRA4.560e-3038.37Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A6U4L7W0_9STRA3.370e-2134.22Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
W7U7D0_9STRA3.710e-2033.47Qb-vti1-family n=1 Tax=Nannochloropsis gaditana Ta... [more]
A0A485K772_9STRA1.710e-1231.00Aste57867_208 protein n=1 Tax=Aphanomyces stellatu... [more]
A0A6T7FTV7_9STRA5.320e-1232.02Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A024TJZ2_9STRA1.170e-1131.03t-SNARE coiled-coil homology domain-containing pro... [more]
A0A4D9CYM8_9STRA3.820e-1133.51V-SNARE domain-containing protein n=1 Tax=Nannochl... [more]
D8TSD7_VOLCA1.220e-1027.12Qb-SNARE, VTI1-family n=3 Tax=Volvox TaxID=3066 Re... [more]
UPI0007381D1F1.980e-1033.16vesicle transport through interaction with t-SNARE... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 111..135
NoneNo IPR availableCOILSCoilCoilcoord: 82..102
NoneNo IPR availableGENE3D1.20.5.110coord: 169..242
e-value: 1.5E-14
score: 55.9
NoneNo IPR availablePFAMPF12352V-SNARE_Ccoord: 177..237
e-value: 4.9E-13
score: 49.2
NoneNo IPR availablePANTHERPTHR21230:SF26VESICLE TRANSPORT THROUGH INTERACTION WITH T-SNARES HOMOLOG 1Bcoord: 44..263
NoneNo IPR availablePANTHERPTHR21230VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATEDcoord: 44..263
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 263..272
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 243..262
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..242
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 177..234
NoneNo IPR availableTMHMMTMhelixcoord: 243..262
IPR007705Vesicle transport v-SNARE, N-terminalPFAMPF05008V-SNAREcoord: 53..127
e-value: 5.9E-9
score: 36.2
IPR038407Vesicle transport v-SNARE, N-terminal domain superfamilyGENE3D1.20.58.400coord: 31..125
e-value: 7.3E-11
score: 44.2
IPR027027GOSR2/Membrin/Bos1PIRSFPIRSF028865Membrin-2coord: 45..262
e-value: 3.5E-11
score: 41.3
IPR010989SNARESUPERFAMILY47661t-snare proteinscoord: 48..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig960contigD-dichotoma_M_contig960:38978..61053 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig960.20323.1mRNA_D-dichotoma_M_contig960.20323.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig960 38978..61053 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig960.20323.1 ID=prot_D-dichotoma_M_contig960.20323.1|Name=mRNA_D-dichotoma_M_contig960.20323.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=273bp
RCLRPSGSRASGWNFFFGRPSSLDYKRMEPFGFESGASRSMSSFRVHEEN
YRRASQAINRHINGLQLKKVEALAAIDLPAELEEAEQYVKGMEIEVRSMK
GNERRQCQSRANQCRADLRALRRSLEQATQRAKAEALLRRGNDGDGSGAD
RNSSWNSGSGGLEGFGPDAAQQSLASRSRMSLLDSRRVVDETEAIGQGVI
GDLEMQRESLLRSQANMRETGSIASRARRVLRTMARRDFRHRLCLYFVIL
CLSVAILLVLYTKLQKYFGSDN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007705Vesicle_trsprt_v-SNARE_N
IPR038407v-SNARE_N_sf
IPR027027GOSR2/Membrin/Bos1
IPR010989SNARE