prot_D-dichotoma_M_contig960.20322.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig960.20322.1
Unique Nameprot_D-dichotoma_M_contig960.20322.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length101
Homology
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BLAST of mRNA_D-dichotoma_M_contig960.20322.1 vs. uniprot
Match: A0A6H5KUE0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KUE0_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 3.550e-38
Identity = 62/100 (62.00%), Postives = 85/100 (85.00%), Query Frame = 0 
Query:    1 MRYILWDVIEVPTKRRCAFAWAKERKQVGPEEWRVSWEQFAPSRRENFPELDKMTTSYMEQFRKRRSDWQNSRKGRRMAVVYGTALFFAVVMADSILAVI 100
            M+Y+LWDV+EVP KRRC+FAWA+ RKQVGP+EWRVSW+QFAPSRR++FPE+D +   Y+ +F +RRS W  SRKGR+ A+VYG+ALF AV++ D++L ++
Sbjct:  390 MKYVLWDVMEVPMKRRCSFAWAENRKQVGPDEWRVSWDQFAPSRRQHFPEMDSVARDYVAEFSRRRSAWHTSRKGRKEAMVYGSALFVAVLIIDNLLKMV 489
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BLAST of mRNA_D-dichotoma_M_contig960.20322.1 vs. uniprot
Match: A0A836CPD1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPD1_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 9.030e-18
Identity = 40/95 (42.11%), Postives = 59/95 (62.11%), Query Frame = 0 
Query:    1 MRYILWDVIEVPTKRRCAFAWAKERKQVGPEEWRVSWEQFAPSRRENFPELDKMTTSYMEQFRKRRSDWQNSRKGRRMAVVYGTALFFAVVMADS 95
            +RY  WD ++ P+KRRCAFA+A+ RKQVGP EW V+ + F  ++R  F +L ++  + M+     R  W   RK R+ A +YG  LF A V+ D+
Sbjct:    5 LRYATWDRLDFPSKRRCAFAFAEGRKQVGPVEWHVTADAFLETQRTYFVDLVRVGGALMDVMEDERWQWHMLRKRRKRAAIYGALLFSATVVLDT 99
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig960.20322.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KUE0_9PHAE3.550e-3862.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CPD1_9STRA9.030e-1842.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 100..100
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 79..99
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..78
NoneNo IPR availableTMHMMTMhelixcoord: 79..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig960contigD-dichotoma_M_contig960:14491..22458 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig960.20322.1mRNA_D-dichotoma_M_contig960.20322.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig960 14489..22594 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig960.20322.1 ID=prot_D-dichotoma_M_contig960.20322.1|Name=mRNA_D-dichotoma_M_contig960.20322.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=101bp
MRYILWDVIEVPTKRRCAFAWAKERKQVGPEEWRVSWEQFAPSRRENFPE
LDKMTTSYMEQFRKRRSDWQNSRKGRRMAVVYGTALFFAVVMADSILAVI
*
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