prot_D-dichotoma_M_contig96.20303.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig96.20303.1
Unique Nameprot_D-dichotoma_M_contig96.20303.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length255
Homology
BLAST of mRNA_D-dichotoma_M_contig96.20303.1 vs. uniprot
Match: D8LLX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX7_ECTSI)

HSP 1 Score: 236 bits (602), Expect = 1.050e-74
Identity = 132/212 (62.26%), Postives = 153/212 (72.17%), Query Frame = 0
Query:   22 RRRL---LGGVP-FACR-FLSESANDSSTLPS----ATRERSWTWSTPSPLRPGRTAPVIPIKPRVNLTVKEVVHGLETQGALDVRVIDLKGKGTGLGDAMVLSTATTPLHMRRLADTIVYALKKRKLRNAMGFTGAEGYDCDDWMLVDCDNMIVHMMMEEKRKELDLESFWSHMVSSAFSALEKKRARGEPGLVEDNVDWEEDFGEEEAKA 224
            RRRL   +G VP  ACR +LS+S++D+   PS    AT  R+WTWSTPSP RPGR    I + PRVNLTV EVV  +E QG  DVR IDL+GKG G+GD MV  TA TPL MRRLA+ +V ALK+RKL NAMG TGAEG DCDDWMLVDCDN+IVH M  E R+ELDLE+ W  + S   +AL  KR +GE G VED VDWEEDFG+E AKA
Sbjct:   25 RRRLPSTVGAVPGLACRRWLSDSSSDTPRPPSSAAAATDGRTWTWSTPSPNRPGRGGAEIAVIPRVNLTVDEVVKAVEAQGGTDVRAIDLRGKGAGMGDFMVFCTAATPLQMRRLANMVVQALKQRKLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETVASG--TALGSKRKKGEEGHVEDPVDWEEDFGQEAAKA 234          
BLAST of mRNA_D-dichotoma_M_contig96.20303.1 vs. uniprot
Match: A0A836CM28_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM28_9STRA)

HSP 1 Score: 147 bits (372), Expect = 1.980e-39
Identity = 76/140 (54.29%), Postives = 100/140 (71.43%), Query Frame = 0
Query:   48 SATRERSWTWSTPSPLRPGRTAPVIPIKPRVNLTVKEVVHGLETQGALDVRVIDLKGKGTGLGDAMVLSTATTPLHMRRLADTIVYALKKRKLRNAMGFTGAEGYDCDDWMLVDCDNMIVHMMMEEKRKELDLESFWSHM 187
            SA + RSWTWS+ +P + G +A  I +KP+V LTV EVV  LE  G  D+RV+ L GK + L DAM+  T  +  HM+RL+D I YALK+RKL +A G TGAEGYDCDDWM+VDC N+IVH+   + RKEL+LE+ W ++
Sbjct:   73 SAVKARSWTWSSNAPRKAGGSAD-IDVKPKVPLTVGEVVTALENNGGTDIRVVHLAGK-SDLADAMIFCTGRSMRHMQRLSDVITYALKRRKLSHAPGITGAEGYDCDDWMIVDCWNLIVHVFEAKYRKELNLEARWENI 210          
BLAST of mRNA_D-dichotoma_M_contig96.20303.1 vs. uniprot
Match: A0A7S2R5J7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5J7_9STRA)

HSP 1 Score: 119 bits (297), Expect = 1.320e-28
Identity = 74/175 (42.29%), Postives = 99/175 (56.57%), Query Frame = 0
Query:   54 SWTWSTPSPLRPGRTAPVIPIKPRVNLTVKEVVHGLETQGALDVRVIDLKGKGTGLGDAMVLSTATTPLHMRRLADTIVYALKKRKLRNAMGFTGAEGYDCDDWMLVDCDNMIVHMMMEEKRKELDLESFWSHMVSSA-FSALEKKRARGEPGLVED-------NVDWEEDFGEE 220
            SW W  P+ +        IP+ PR  LTV+EV   LE    + V V+D+ GK      +MV  T     HMRR+AD +V ALKKRK++ A G +GAEGYDCDDWM+VD  N+IVH+M E+ R+ LDLE+ W +  ++      E +R      L+E        NVD EE F +E
Sbjct:   70 SWNWEPPAVVEQQAAGYQIPVVPRKYLTVEEVTTALEELRGMQVAVVDVTGKLEETS-SMVFCTGLGRTHMRRMADVLVSALKKRKIK-APGASGAEGYDCDDWMIVDAGNIIVHLMNEKARRLLDLEAHWKNPEATLPQGGTESQREAHIEELIEQFPTPYDYNVDEEESFVDE 242          
BLAST of mRNA_D-dichotoma_M_contig96.20303.1 vs. uniprot
Match: W7TLC1_9STRA (Iojap-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLC1_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.560e-25
Identity = 63/139 (45.32%), Postives = 82/139 (58.99%), Query Frame = 0
Query:   55 WTWSTPSPL-------RPGRTAPVIPIKPRVNLTVKEVVHGLETQGALDVRVIDLKGKGTGLGDAMVLSTATTPLHMRRLADTIVYALKKRKLRN--AMGFTGAEGYDCDDWMLVDCDNMIVHMMMEEKRKELDLESFW 184
            WTW+ PS L       R    A  IP+ PR  L   EVV  L   G  DV  +D++GKG    +AM+ ++  +  H+RR+ADT+V ALK R +    A G TGAEGYDC+DWM+VD  N+IVH+M   +R  L LE FW
Sbjct:  230 WTWARPSRLAQEEAQGRKTSRAGAIPVLPRTLLRPAEVVEALVALGGEDVASVDIRGKGNFNAEAMIFASGRSGGHLRRMADTVVGALKARGIEEMEAPGVTGAEGYDCEDWMIVDGGNVIVHLMEPSQRAALGLEGFW 368          
BLAST of mRNA_D-dichotoma_M_contig96.20303.1 vs. uniprot
Match: A0A2D4BP62_PYTIN (Iojap-like ribosome-associated protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BP62_PYTIN)

HSP 1 Score: 110 bits (275), Expect = 2.750e-25
Identity = 53/121 (43.80%), Postives = 79/121 (65.29%), Query Frame = 0
Query:   67 RTAPVIPIKPRVNLTVKEVVHGLETQGALDVRVIDLKGKGTGLGDAMVLSTATTPLHMRRLADTIVYALKKRKLRNAMGFTGAEGYDCDDWMLVDCDNMIVHMMMEEKRKELDLESFWSHM 187
            R A +IP  P+  LT+ EV+  LE + A+DV  +DL GK + L D MV +T  +  HMRR+AD ++ ++K R + +   ++  EG DCDDWM+ DC+N++VH M E+ R+ L+LE  W HM
Sbjct:  112 RNADIIPPIPQTYLTLDEVLAALEREKAIDVYTVDLAGKSS-LADFMVFTTGRSQAHMRRMADMLIQSMKARNIEDEFDYS-VEGRDCDDWMIADCNNIVVHFMREDTRRILNLEHHWEHM 230          
BLAST of mRNA_D-dichotoma_M_contig96.20303.1 vs. uniprot
Match: A0A3F2RH48_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RH48_9STRA)

HSP 1 Score: 108 bits (271), Expect = 3.180e-25
Identity = 53/123 (43.09%), Postives = 80/123 (65.04%), Query Frame = 0
Query:   67 RTAPVIPIKPRVNLTVKEVVHGLETQGALDVRVIDLKGKGTGLGDAMVLSTATTPLHMRRLADTIVYALKKRKLRNAMGFTGAEGYDCDDWMLVDCDNMIVHMMMEEKRKELDLESFWSHMVS 189
            R A +IP  P+  LT+ EV   LE + A+DV  +DL GK + L D MV +T  +  HMRR+AD ++ ++K R++ +   + G EG DCDDWM+ DC+N++VH+M  + R+ L LE  W +MV+
Sbjct:   64 RHADIIPAVPQTYLTIDEVQEALEREKAIDVYTVDLAGKSS-LADYMVFATGKSQAHMRRMADLLIKSMKAREIVDEFDY-GVEGRDCDDWMIADCNNIVVHLMHADTRRILALEDHWENMVN 184          
BLAST of mRNA_D-dichotoma_M_contig96.20303.1 vs. uniprot
Match: A0A3R7GIQ2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GIQ2_9STRA)

HSP 1 Score: 108 bits (271), Expect = 2.910e-24
Identity = 53/123 (43.09%), Postives = 80/123 (65.04%), Query Frame = 0
Query:   67 RTAPVIPIKPRVNLTVKEVVHGLETQGALDVRVIDLKGKGTGLGDAMVLSTATTPLHMRRLADTIVYALKKRKLRNAMGFTGAEGYDCDDWMLVDCDNMIVHMMMEEKRKELDLESFWSHMVS 189
            R A +IP  P+  LT+ EV   LE + A+DV  +DL GK + L D MV +T  +  HMRR+AD ++ ++K R++ +   + G EG DCDDWM+ DC+N++VH+M  + R+ L LE  W +MV+
Sbjct:  180 RHADIIPAVPQTYLTIDEVQEALEREKAIDVYTVDLAGKSS-LADYMVFATGKSQAHMRRMADLLIKSMKAREIVDEFDY-GVEGRDCDDWMIADCNNIVVHLMHADTRRILALEDHWENMVN 300          
BLAST of mRNA_D-dichotoma_M_contig96.20303.1 vs. uniprot
Match: A0A225W4Y2_9STRA (Iojap-like ribosome-associated protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W4Y2_9STRA)

HSP 1 Score: 107 bits (267), Expect = 6.490e-24
Identity = 54/127 (42.52%), Postives = 80/127 (62.99%), Query Frame = 0
Query:   67 RTAPVIPIKPRVNLTVKEVVHGLETQGALDVRVIDLKGKGTGLGDAMVLSTATTPLHMRRLADTIVYALKKRKLRNAMGFTGAEGYDCDDWMLVDCDNMIVHMMMEEKRKELDLESFWSHMVSSAFS 193
            R A +IP  P+  LT++EV   LE + A+DV  +DL GK T L D MV +T  +  HMRR+AD ++ ++K R++ +   +   EG DCDDWM+ DC+N++VH+M  + R+ L LE  W +MV    S
Sbjct:  148 RHADIIPPIPQSYLTIEEVKDALEREKAIDVYTVDLAGK-TSLADFMVFATGRSQAHMRRMADLLIKSMKAREIVDDFDYA-VEGRDCDDWMIADCNNIVVHLMRADTRRILALEDHWENMVDDKHS 272          
BLAST of mRNA_D-dichotoma_M_contig96.20303.1 vs. uniprot
Match: H3GI95_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GI95_PHYRM)

HSP 1 Score: 107 bits (266), Expect = 8.430e-24
Identity = 53/127 (41.73%), Postives = 80/127 (62.99%), Query Frame = 0
Query:   67 RTAPVIPIKPRVNLTVKEVVHGLETQGALDVRVIDLKGKGTGLGDAMVLSTATTPLHMRRLADTIVYALKKRKLRNAMGFTGAEGYDCDDWMLVDCDNMIVHMMMEEKRKELDLESFWSHMVSSAFS 193
            R A +IP  P+  LT+ EV+  LE + A+DV  +DL GK + L D MV +T  +  HMRR+AD ++ ++K R++ +   ++  EG DCDDWM+ DC+N++VH+M  + R+ L LE  W  MV    S
Sbjct:  143 RHADIIPSIPQTYLTIDEVMEALEKEKAIDVYTVDLAGKSS-LADFMVFATGRSQAHMRRMADLLIKSMKVRQIVDDFDYS-VEGRDCDDWMIADCNNIVVHLMRADTRRILALEEHWEKMVDDKHS 267          
BLAST of mRNA_D-dichotoma_M_contig96.20303.1 vs. uniprot
Match: A0A0P1A703_PLAHL (Iojap-like ribosome-associated protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A703_PLAHL)

HSP 1 Score: 107 bits (266), Expect = 8.580e-24
Identity = 55/133 (41.35%), Postives = 82/133 (61.65%), Query Frame = 0
Query:   61 SPLRPGRTAPVIPIKPRVNLTVKEVVHGLETQGALDVRVIDLKGKGTGLGDAMVLSTATTPLHMRRLADTIVYALKKRKLRNAMGFTGAEGYDCDDWMLVDCDNMIVHMMMEEKRKELDLESFWSHMVSSAFS 193
            +P+   R A +IP  P+  L++ EV   LE + A+DV  +DL GK +GL + MV  T  +  HMRR+AD ++ +LK R++ +   + G EG DCDDWM+ DC+N++VH M  + R+ L LE  W +MV    S
Sbjct:  139 APVAGNRHADIIPPIPQTYLSLDEVQKALEREKAIDVYTVDLSGK-SGLANYMVFVTGRSQAHMRRMADLLIKSLKAREIVDDFDY-GVEGRDCDDWMIADCNNIVVHFMRADTRRILALEDHWENMVDDKHS 269          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig96.20303.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLX7_ECTSI1.050e-7462.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CM28_9STRA1.980e-3954.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2R5J7_9STRA1.320e-2842.29Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7TLC1_9STRA1.560e-2545.32Iojap-like protein n=2 Tax=Monodopsidaceae TaxID=4... [more]
A0A2D4BP62_PYTIN2.750e-2543.80Iojap-like ribosome-associated protein n=1 Tax=Pyt... [more]
A0A3F2RH48_9STRA3.180e-2543.09Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A3R7GIQ2_9STRA2.910e-2443.09Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
A0A225W4Y2_9STRA6.490e-2442.52Iojap-like ribosome-associated protein n=1 Tax=Phy... [more]
H3GI95_PHYRM8.430e-2441.73Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A0P1A703_PLAHL8.580e-2441.35Iojap-like ribosome-associated protein n=1 Tax=Pla... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.460.10coord: 78..196
e-value: 1.8E-23
score: 84.4
NoneNo IPR availablePFAMPF02410RsfScoord: 84..184
e-value: 5.2E-22
score: 78.2
NoneNo IPR availablePANTHERPTHR21043:SF0MITOCHONDRIAL ASSEMBLY OF RIBOSOMAL LARGE SUBUNIT PROTEIN 1coord: 42..230
NoneNo IPR availableSUPERFAMILY81301Nucleotidyltransferasecoord: 82..187
IPR004394Protein Iojap/ribosomal silencing factor RsfSTIGRFAMTIGR00090TIGR00090coord: 82..184
e-value: 3.9E-18
score: 63.4
IPR004394Protein Iojap/ribosomal silencing factor RsfSPANTHERPTHR21043IOJAP SUPERFAMILY ORTHOLOGcoord: 42..230
IPR004394Protein Iojap/ribosomal silencing factor RsfSHAMAPMF_01477Iojap_RsfScoord: 74..185
score: 16.502

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig96contigD-dichotoma_M_contig96:138621..147963 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig96.20303.1mRNA_D-dichotoma_M_contig96.20303.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig96 138025..148220 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig96.20303.1 ID=prot_D-dichotoma_M_contig96.20303.1|Name=mRNA_D-dichotoma_M_contig96.20303.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=255bp
MPSSSLSTLSHPVCQSFFRNGRRRLLGGVPFACRFLSESANDSSTLPSAT
RERSWTWSTPSPLRPGRTAPVIPIKPRVNLTVKEVVHGLETQGALDVRVI
DLKGKGTGLGDAMVLSTATTPLHMRRLADTIVYALKKRKLRNAMGFTGAE
GYDCDDWMLVDCDNMIVHMMMEEKRKELDLESFWSHMVSSAFSALEKKRA
RGEPGLVEDNVDWEEDFGEEEAKAFSSSSSAAPTVSREQGAEGADGVDGK
QEAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004394Iojap/RsfS/C7orf30