prot_D-dichotoma_M_contig955.20269.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig955.20269.1
Unique Nameprot_D-dichotoma_M_contig955.20269.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length581
Homology
BLAST of mRNA_D-dichotoma_M_contig955.20269.1 vs. uniprot
Match: D8LC09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC09_ECTSI)

HSP 1 Score: 343 bits (879), Expect = 3.650e-106
Identity = 254/702 (36.18%), Postives = 341/702 (48.58%), Query Frame = 0
Query:    2 RTSTLSTVMLAGLIGRAPMSSAGPVCHRVASQWTVVFKASCTEWYANGGLERGEPVPDVCSQEFSGDVKVKEFPWNGEVMIVDNENPKSDFTRQQPEQDVAHYRAGIVLVQSSWDVGSDGFWSPRQGTNTESINASVVYVTTEAEEQKFVKFHSLVEYNPSSPAGKNGDRRL-EGHTYEGVYDFDGGIDDPEGTSVPLWMGDEQLSTGQEDEEGSEGIYHPDYIYSYDYVSYDFSYSVELSYLDSYMFDVAEDEALTDDS-----------------------VRSITAVDIYVCVDEENSLAEMRFYCDPDNTGTATCYEKAAGANTRALNIHGFEMFCAKQCLTGELEGLWCDIFGLDGCRMCSTDCSALCDGAGSCLPCVSCPPDNYHPVSGSTPAPAPTDGGSPYP---GQPT-------------------------------------------------PAPGNAEPSAQT--PSXXPGPTGF-EPV-------LTLAPATDFSGVHSTY-----------------------TPAPATTAGSMPSPGSMLRGGS--ETAAPTWXXXXXXXXXXXXXXXXXXXXXXXXXQDMPTAAPTSV---GVDVLHFV---------CTPGDADSCYNELLAIERDVLEDSGRGLTCEESCIVNGGPWCKAYGLGGCRFCHLNCVDFCVDEGLPEGCLCFEC 580
            R ++L+ V+L   + +A ++ A P C RVA QW V+F A CT+W+   G  RG P P+ C Q+F+  V V+ FPWN +V+IVDNE P  DF+ Q PEQ V  + AGIV++Q+SWD+     W PR  ++ E I A V Y+ ++     ++ F   V Y P  P      R L E +      D +  I +   T  PL     Q +TG       +  Y P Y+YSY+  SYDFS   EL  LDSY ++  +     + S                       V+S+T++DIYVC DE+N+LAE+RF CDP+N G A C+ +A   N RAL+IHG +M+C K CL G+  GLWCDIFGLDGCRMC+ DC+++CDG  SC  C+ C            P P+PTDG    P   G PT                                                 PAP   + S     PS    PT   EP         ++AP T                                T +P T+ GS        RGG   ET +PT          XXXXXXXXXXXXX   +++ TA+PTS    G+ ++            CTPGD+D+CY++L    + +L +  RGLTCEESC+V GG WC A GL GCRFC  +C +FC ++GLP+ C C EC
Sbjct:    8 RAASLAAVLLG--LQQAGLAFAAPTCERVAGQWAVIFSAECTQWFQQIGSRRGSP-PESCIQQFTSAVLVENFPWNDDVVIVDNETPGDDFSLQ-PEQPVLKFGAGIVIMQTSWDMEDGSLWQPRMSSSAERIYAEVEYIASD--NHSYLDFDLSVRYEPEHPPPGRLMRALSEDNDAPDAADVEE-ILELSATPPPL----AQDATG-------DLSYEPAYVYSYELESYDFSXXXELEDLDSYSYEFIDSMFEEESSPYSQTYSYNFRGEEEVSVPPPSAVQSVTSLDIYVCTDEDNNLAELRFNCDPENDGDAQCFAEAGEPNVRALHIHGMDMYCDKVCLAGQEGGLWCDIFGLDGCRMCTDDCTSICDGEASCSSCILCGAPRV------PPPPSPTDGSRGIPIMSGSPTMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMXXXXXXXSSTHMTPAPSFEDGSMVPLEPSYMAAPTSSAEPTDDREIDSPSMAPTTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKETQSPTTSDGS--------RGGLNFETQSPT-----ASNDMXXXXXXXXXXXXXSTSREIATASPTSSTSRGIPIMSASPASGVTFTECTPGDSDTCYDQLEPSMKGLLVERSRGLTCEESCLVGGGLWCDALGLSGCRFCATSCDNFCTEQGLPDDCECIEC 672          
BLAST of mRNA_D-dichotoma_M_contig955.20269.1 vs. uniprot
Match: A0A6H5JD92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD92_9PHAE)

HSP 1 Score: 239 bits (611), Expect = 1.720e-64
Identity = 163/501 (32.53%), Postives = 226/501 (45.11%), Query Frame = 0
Query:    2 RTSTLSTVMLAGLIGRAPMSSAGPVCHRVASQWTVVFKASCTEWYANGGLERGEPVPDVCSQE---------------FSGDVKVKEFPWNGEVMIVDNENPKSDFTRQQPEQDVAHYRAGIVLVQSSWDVGSDGFWSPRQGTNTESINASVVYVTTEAEEQKFVKFHSLVEYNPSSP-------AGKNGDRRLEGHTYEGVYDFDGGIDDPEGTSVPLWMGDEQLSTGQEDEEGSEGIYHPDYIYSYDYVSYDFSYSVELSYLDSYMFDVAE---DEALTDDS--------------------VRSITAVDIYVCVDEENSLAEMRFYCDPDNTGTATCYEKAAGANTRALNIH---------------------------------------------------------------------------GFEMFCAKQCLTGELEGLWCDIFGLDGCRMCSTDCSALCDGAGSCLPCVSCPPDNYHPVSGSTPAPAPTDG 382
            R + L+ V+L   + +A ++ A P C RVASQW V+F A CT+W+   G  RG P P+ C Q+               F+  V V+ FPWN +V+IVDNE P  DF+ Q PEQ V  + AGIV++Q+SWD+     W PR  ++ E + A V Y+ ++     ++ F   V Y P  P       A    D+  +    E + +          T  PL           +D  G    Y P YIYSY+  SYDFSY+ EL  LDSY ++  +   +E ++  S                    V+S+T++DIYVC DE+ +LAE+RF CD +N G A C+ +A   N RAL IH                                                                           G +M+C K CL G+  GLWCDIFGLDGCRMC+ DC+++CDG  SC  C+ C          + PAP+PTDG
Sbjct:    8 RVAFLAAVLLG--LQQAGLAFAAPTCERVASQWAVIFSAECTQWFQQIGSRRGSP-PESCIQDPTWNHCMSNMRHDKQFTSAVLVENFPWNDDVVIVDNETPGDDFSLQ-PEQPVLKFGAGIVIMQTSWDMEDGSLWQPRMSSSAERVYAEVEYIASD--NHSYLDFDLSVRYEPEHPPPGSLARALSEDDKAPDEADVEEILELSA-------TPPPL----------AQDANGDLS-YEPAYIYSYELESYDFSYNFELEDLDSYSYEFIDSMFEEEISPYSQTYSYNFRGGEEVSVPPPSAVQSVTSLDIYVCTDEDINLAELRFNCDLENDGDAQCFAEAGEPNVRALQIHVRMKKYIEFPRLKFWCDVVLLHLCLIFVISCVFYFLCVGSKCECEERHGTKLSHLDIRYRKSDTVTLAVTRQAQQGMDMYCDKVCLPGQEGGLWCDIFGLDGCRMCTDDCTSICDGEASCSSCILCGAPR------APPAPSPTDG 478          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig955.20269.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LC09_ECTSI3.650e-10636.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JD92_9PHAE1.720e-6432.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..580
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.532

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig955contigD-dichotoma_M_contig955:116467..120665 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig955.20269.1mRNA_D-dichotoma_M_contig955.20269.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig955 116184..122493 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig955.20269.1 ID=prot_D-dichotoma_M_contig955.20269.1|Name=mRNA_D-dichotoma_M_contig955.20269.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=581bp
MRTSTLSTVMLAGLIGRAPMSSAGPVCHRVASQWTVVFKASCTEWYANGG
LERGEPVPDVCSQEFSGDVKVKEFPWNGEVMIVDNENPKSDFTRQQPEQD
VAHYRAGIVLVQSSWDVGSDGFWSPRQGTNTESINASVVYVTTEAEEQKF
VKFHSLVEYNPSSPAGKNGDRRLEGHTYEGVYDFDGGIDDPEGTSVPLWM
GDEQLSTGQEDEEGSEGIYHPDYIYSYDYVSYDFSYSVELSYLDSYMFDV
AEDEALTDDSVRSITAVDIYVCVDEENSLAEMRFYCDPDNTGTATCYEKA
AGANTRALNIHGFEMFCAKQCLTGELEGLWCDIFGLDGCRMCSTDCSALC
DGAGSCLPCVSCPPDNYHPVSGSTPAPAPTDGGSPYPGQPTPAPGNAEPS
AQTPSPTPGPTGFEPVLTLAPATDFSGVHSTYTPAPATTAGSMPSPGSML
RGGSETAAPTWAEGRSSTAAPTWAEGRSSTAAPTWEQDMPTAAPTSVGVD
VLHFVCTPGDADSCYNELLAIERDVLEDSGRGLTCEESCIVNGGPWCKAY
GLGGCRFCHLNCVDFCVDEGLPEGCLCFEC*
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