prot_D-dichotoma_M_contig954.20258.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig954.20258.1
Unique Nameprot_D-dichotoma_M_contig954.20258.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length200
Homology
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BLAST of mRNA_D-dichotoma_M_contig954.20258.1 vs. uniprot
Match: A0A6H5KNS3_9PHAE (GT49 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KNS3_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 1.550e-8
Identity = 49/118 (41.53%), Postives = 59/118 (50.00%), Query Frame = 0 
Query:    2 REIAPHFPVYVILLRRDPAAVLKSRFELGDFC----------------SRESVRTGSCSPI--------DVGRGGGEVPENREGKDHRRDGSSNDDWADVDGIESLIAYASFTEARIR 95
            RE+APHF V V++LRRDPAAVLKSR ELG FC                SR S    + +          D   GGGE         +RR   S     D+DG E+LIAYA+ TE +IR
Sbjct: 1322 RELAPHFRVDVVVLRRDPAAVLKSRIELGHFCRRHKRSDWLLLPAHNESRASTAAATATSAHNRCRQHADAPCGGGE---------NRR--LSPVQEVDMDGFEALIAYAANTETQIR 1428
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig954.20258.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KNS3_9PHAE1.550e-841.53GT49 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig954contigD-dichotoma_M_contig954:103882..104926 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig954.20258.1mRNA_D-dichotoma_M_contig954.20258.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig954 90723..104926 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig954.20258.1 ID=prot_D-dichotoma_M_contig954.20258.1|Name=mRNA_D-dichotoma_M_contig954.20258.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=200bp
MREIAPHFPVYVILLRRDPAAVLKSRFELGDFCSRESVRTGSCSPIDVGR
GGGEVPENREGKDHRRDGSSNDDWADVDGIESLIAYASFTEARIRDFKRR
YSDQPQRDLVAEDEQSPNPTPPASRTEAPPSDTASSPSCRIIEARLESLM
GETGVRKLFEELHLEPSESTWAAVERGATNLCLKAKRGRNVPLEYCRDRM
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