prot_D-dichotoma_M_contig952.20245.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig952.20245.1
Unique Nameprot_D-dichotoma_M_contig952.20245.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length238
Homology
BLAST of mRNA_D-dichotoma_M_contig952.20245.1 vs. uniprot
Match: D7FVM6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVM6_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 2.230e-31
Identity = 65/126 (51.59%), Postives = 81/126 (64.29%), Query Frame = 0
Query:   33 SAVPAGAAVNDEGVFNFKLVDHIDQLDQRHSLRG-----------PHLFSIPAPGGNVCLVIDERGAYHALRDSCPPMGLPISESGVVDTEVGVIEDVLFGTRFNLSDGSVRGRFCPGG-IAGPFL 146
            +A  AG A      F   LV+  DQLD+    R            PHLF IPAPGG+VCLV+DE+  Y+A+RD  PP G+P+S++GVVD++V  I D LFGTRFNL DG+VRG +CPGG  AGP L
Sbjct:   45 AAAAAGPAAATTEFFQHTLVESTDQLDKLQQPRHHGNECSGPVPPPHLFRIPAPGGDVCLVVDEKKNYYAMRDCFPPFGVPVSQTGVVDSQVDAIGDSLFGTRFNLKDGTVRGPWCPGGGTAGPLL 170          
BLAST of mRNA_D-dichotoma_M_contig952.20245.1 vs. uniprot
Match: A0A6H5JUG0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUG0_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 3.000e-29
Identity = 59/114 (51.75%), Postives = 76/114 (66.67%), Query Frame = 0
Query:   47 FNFKLVDHIDQLDQR-------------HSLRGPHLFSIPAPGGNVCLVIDERGAYHALRDSCPPMGLPISESGVVDTEVGVIEDVLFGTRFNLSDGSVRGRFCPGG-IAGPFL 146
            F + LV+  DQL+                 +  PHLF IPAPGG+VCLV+DE  +Y+A+RD  PP G+P+S++GVVD++V  I D LFGTRFNL DG+VRG +CPGG  AGP L
Sbjct:   58 FQYTLVESTDQLEXXXXXXXXXXGNEWFEPVPPPHLFRIPAPGGDVCLVVDENKSYYAMRDCFPPFGVPVSQTGVVDSQVDAIGDSLFGTRFNLEDGTVRGPWCPGGGTAGPLL 171          
BLAST of mRNA_D-dichotoma_M_contig952.20245.1 vs. uniprot
Match: A0A836CM18_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM18_9STRA)

HSP 1 Score: 124 bits (312), Expect = 5.530e-29
Identity = 87/197 (44.16%), Postives = 108/197 (54.82%), Query Frame = 0
Query:   11 FIFVALPFLPLHHVEAFVPFHLSAVPAGAA---VNDEGVFNFKLVDHIDQLDQRHSLRGPHLFSIPAPGGNVCLVIDERGAYHALRDSCPPMGLPISESGVVDTEVGVIEDVLFGTRFNLSDGSVRGRFCPGGIAGPFLRVLRLLLSTWTRLRLLGRVTEPQHHRRLSRSLEILALRLQPGGSLTVSLPA--ALLSD 202
            F+FV+L  L L      VP   S +P+ A+   ++       KL  H DQL    +   P +FSIP   G VCLV+DE G  HA+RDSCPP+G PIS +GVVD+E+GVIED+ FGTRF LS G+ RGR CPGG A    R LR L S W +              R+S  LE   L     G L  ++PA  ALL D
Sbjct:  616 FLFVSLLVLALFQT---VPLLASVLPSRASAMTLSTTPPLQIKLC-HKDQLAPLGAPPPPLVFSIPVLCGTVCLVVDENGKSHAMRDSCPPLGSPISATGVVDSEIGVIEDLRFGTRFYLSSGAPRGRLCPGGTAP---RALRWLASRWMQAA------------RVSPQLETYELTEDEDGWLCAAVPAPSALLRD 793          
BLAST of mRNA_D-dichotoma_M_contig952.20245.1 vs. uniprot
Match: A0A7S2C6P6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C6P6_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 5.810e-8
Identity = 32/84 (38.10%), Postives = 44/84 (52.38%), Query Frame = 0
Query:   69 LFSIPAPGG---------NVCLVIDERGAYHALRDSCPPMGLPISESGVVDTEVG--VIEDVLFGTRFNLSDGSVRGRFCPGGI 141
            L  +P PGG         +VC+ +   G  +AL    PP G P+      D +VG   I+D  +GT FNL +G V G++CPGGI
Sbjct:   56 LSDLPKPGGAVGAVVGGLDVCIAVGTDGLIYALGGKAPPTGTPLK-----DGKVGKKTIKDAQYGTEFNLENGQVEGKWCPGGI 134          
BLAST of mRNA_D-dichotoma_M_contig952.20245.1 vs. uniprot
Match: A0A7S2FV96_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FV96_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.210e-7
Identity = 32/84 (38.10%), Postives = 44/84 (52.38%), Query Frame = 0
Query:   69 LFSIPAPGG---------NVCLVIDERGAYHALRDSCPPMGLPISESGVVDTEVG--VIEDVLFGTRFNLSDGSVRGRFCPGGI 141
            L  +P PGG         +VC+ +   G  +AL    PP G P+      D +VG   I+D  +GT FNL +G V G++CPGGI
Sbjct:   56 LSDLPKPGGAVGAVVGGLDVCIAVGTDGLIYALGGKAPPTGTPLK-----DGKVGKKTIKDAQYGTEFNLENGQVEGKWCPGGI 134          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig952.20245.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FVM6_ECTSI2.230e-3151.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JUG0_9PHAE3.000e-2951.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CM18_9STRA5.530e-2944.16Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2C6P6_9STRA5.810e-838.10Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2FV96_9STRA1.210e-738.10Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3D2.102.10.10coord: 62..142
e-value: 2.0E-5
score: 26.0
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILY50022ISP domaincoord: 72..134
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..237
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.826

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig952contigD-dichotoma_M_contig952:166370..167604 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig952.20245.1mRNA_D-dichotoma_M_contig952.20245.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig952 165773..167666 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig952.20245.1 ID=prot_D-dichotoma_M_contig952.20245.1|Name=mRNA_D-dichotoma_M_contig952.20245.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=238bp
MFLHLHFPLVFIFVALPFLPLHHVEAFVPFHLSAVPAGAAVNDEGVFNFK
LVDHIDQLDQRHSLRGPHLFSIPAPGGNVCLVIDERGAYHALRDSCPPMG
LPISESGVVDTEVGVIEDVLFGTRFNLSDGSVRGRFCPGGIAGPFLRVLR
LLLSTWTRLRLLGRVTEPQHHRRLSRSLEILALRLQPGGSLTVSLPAALL
SDEYVTGGPRREAIIGSLPPPTGVAWMEECGLAGYCH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036922Rieske_2Fe-2S_sf