prot_D-dichotoma_M_contig952.20244.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig952.20244.1
Unique Nameprot_D-dichotoma_M_contig952.20244.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length111
Homology
[Close]
BLAST of mRNA_D-dichotoma_M_contig952.20244.1 vs. uniprot
Match: A0A6H5JC20_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC20_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 6.960e-9
Identity = 46/105 (43.81%), Postives = 59/105 (56.19%), Query Frame = 0 
Query:    1 MQELAESVVDLGQSSSLKCDW--KLDLYHQDGAMPAEPGANGAASQAAGTGAETT--GEGAVRGVTPASSTV-----PLFNVEEGEFVALPTPPGMKESVSVGKV 96
            M+ELAESVV+L +S+ +   W  + D+Y  D   PA    NG+    +G    T+  G G+V G    S        P+F+VE GEFVALPTPPG   SV VGKV
Sbjct:    1 MEELAESVVELSRSTPVPFGWGSECDMYTLDNQEPASD-CNGSQQTPSGAAGATSPAGAGSVSGRGTGSRARKRVDGPVFHVEVGEFVALPTPPGTA-SVLVGKV 103
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig952.20244.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JC20_9PHAE6.960e-943.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig952contigD-dichotoma_M_contig952:161761..162093 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig952.20244.1mRNA_D-dichotoma_M_contig952.20244.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig952 161584..162093 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig952.20244.1 ID=prot_D-dichotoma_M_contig952.20244.1|Name=mRNA_D-dichotoma_M_contig952.20244.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=111bp
MQELAESVVDLGQSSSLKCDWKLDLYHQDGAMPAEPGANGAASQAAGTGA
ETTGEGAVRGVTPASSTVPLFNVEEGEFVALPTPPGMKESVSVGKVLAVE
QGDGGDELELH
back to top