prot_D-dichotoma_M_contig952.20239.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig952.20239.1
Unique Nameprot_D-dichotoma_M_contig952.20239.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length324
Homology
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BLAST of mRNA_D-dichotoma_M_contig952.20239.1 vs. uniprot
Match: D7FM28_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM28_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 1.610e-22
Identity = 55/92 (59.78%), Postives = 60/92 (65.22%), Query Frame = 0 
Query:    1 METSKAQRLHDTLQKLAPRGNHGGLGSSGLIAGGFKHRDNGLPKNDSLGAACPVLPPSVGLLPRALRNEQNCLYMYFVKPGHFKTTFADSDE 92
            ME SK QRLHDTL+KLAP+GNHGGLGS+GL+ GGFK RDNGLPKN                           LY YFVKPGHFKTTFADSD+
Sbjct:    1 MEDSKLQRLHDTLKKLAPKGNHGGLGSAGLVKGGFKQRDNGLPKNG--------------------------LYSYFVKPGHFKTTFADSDD 66
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BLAST of mRNA_D-dichotoma_M_contig952.20239.1 vs. uniprot
Match: A0A6H5L1A4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1A4_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 3.070e-22
Identity = 55/91 (60.44%), Postives = 59/91 (64.84%), Query Frame = 0 
Query:    1 METSKAQRLHDTLQKLAPRGNHGGLGSSGLIAGGFKHRDNGLPKNDSLGAACPVLPPSVGLLPRALRNEQNCLYMYFVKPGHFKTTFADSD 91
            ME SK QRLHDTL+KLAP+GNHGGLGS+GL+ GGFK RDNGLPKN                           LY YFVKPGHFKTTFADSD
Sbjct:    1 MEDSKLQRLHDTLKKLAPKGNHGGLGSAGLVRGGFKQRDNGLPKNG--------------------------LYSYFVKPGHFKTTFADSD 65
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BLAST of mRNA_D-dichotoma_M_contig952.20239.1 vs. uniprot
Match: A0A835ZCI6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCI6_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 2.780e-9
Identity = 43/93 (46.24%), Postives = 47/93 (50.54%), Query Frame = 0 
Query:    1 METSKAQRLHDTLQKLAPRGNHGGLGSSGLIAG-GFKHRDNGLPKNDSLGAACPVLPPSVGLLPRALRNEQNCLYMYFVKPGHFKTTFADSDE 92
            ME  K Q+LHDTL KL P GNHG LGS     G G  HRDNGLPKN                           LY +FV+ GHFK  FADSD+
Sbjct:    1 MEDWKLQQLHDTLAKLRPTGNHG-LGSRSQTTGIGHAHRDNGLPKNG--------------------------LYSFFVREGHFKKKFADSDD 66
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig952.20239.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FM28_ECTSI1.610e-2259.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1A4_9PHAE3.070e-2260.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZCI6_9STRA2.780e-946.24Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 118..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig952contigD-dichotoma_M_contig952:56225..58150 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig952.20239.1mRNA_D-dichotoma_M_contig952.20239.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig952 56225..58297 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig952.20239.1 ID=prot_D-dichotoma_M_contig952.20239.1|Name=mRNA_D-dichotoma_M_contig952.20239.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=324bp
METSKAQRLHDTLQKLAPRGNHGGLGSSGLIAGGFKHRDNGLPKNDSLGA
ACPVLPPSVGLLPRALRNEQNCLYMYFVKPGHFKTTFADSDEDDDRAAGG
DKDSDDASAQQAADKKSKRRREKEARKAEKAAKKLAKKAREKKKLEDPEA
TAPAEEAGQLHGATKQAGTKGNDDLCAEGAVSSKRKKSRKAKPERESGAC
SNGAAKGDGDNDCNSDDDDDADEVANGKVKEAGCEATPVKKSKRKVKSRK
EKTEQEGREVCPGDAVVENGLVEKRENGLITSAVKKKGKKRKRSSIETDE
AELDGMPEESDGLSTKKRKKKKKG
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