prot_D-dichotoma_M_contig950.20227.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig950.20227.1
Unique Nameprot_D-dichotoma_M_contig950.20227.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length518
Homology
BLAST of mRNA_D-dichotoma_M_contig950.20227.1 vs. uniprot
Match: A0A6H5KLJ1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLJ1_9PHAE)

HSP 1 Score: 474 bits (1219), Expect = 2.260e-160
Identity = 250/417 (59.95%), Postives = 309/417 (74.10%), Query Frame = 0
Query:   93 LFASRKNRGSFSWDEDVLERRVKDMLVERAIDTAEYYWSETGGEIYRKWLGNFGKELEMGEDVVNKLGWARYLLKMMEAEPEESVIVRTVMKDSDEVIAAREK--NNARPPTLSPWRHTANQLSADWDEDEMEEMKMALDYPPQFQTVKKEVVVQPVDVAKRVMAIREQLAVEWTEDLANIEGENEEIKRLEKEMRQRV-----GEDAAE------SERRLTYDHGEAFGGDSTPFRADSYETLVSYLTEIGALAVQEKMRIDGDEMGWQWMEQFLYWTKANSKSGLA--GSESAANPPRSPSASRKSGRGVGGEGAGARGKEVSAMFGQAGGGMHETEDEKKIRGNRLLEEMMAGPKMQMVDTKTGEMIGVDPPKICGLVMAARLGVAERIKSALRSVPADHGLVLRRYLEGKWKA 494
            +  S   R S+SWDEDVL+R VKDMLV+RA++T  + W+ETGG+IY +WL  F     +G+DV++ +GWAR+L+KMM  EP E+V++RT  KDS +VI A+ K  NNARPPTLSPWRH+ NQLSADWD +E EEMK+ALDYPPQ + VK+ VVVQP ++AK++M IREQLA+EW EDL NIE EN+EI RL+ + R+R      G D  E      S RRLTYDHG+AFGGDS+P R+D+YETLV YLTEI AL VQE+MR+DGD+MGW WMEQFLYW KANSK G A  G ES  +PP  PS     G G  GE  GARGK V A FG AG GM  T++++K RGNR+LEEM+ G K+Q  D K  +++GVDP +I  LVM AR+ VA RI +AL +VPADHGLVLRRYLE KW+A
Sbjct:   58 MSGSSNGRESYSWDEDVLDRAVKDMLVDRAVETVRHLWNETGGDIYGQWLDRFTARQNLGDDVISTMGWARFLIKMMREEPVEAVVIRTAKKDSPQVIEAQRKARNNARPPTLSPWRHSVNQLSADWDAEEEEEMKVALDYPPQLKAVKRSVVVQPAELAKKLMDIREQLALEWREDLKNIEVENDEIVRLDNDRRRRAREAGPGYDEVEQGGXXXSRRRLTYDHGQAFGGDSSPLRSDNYETLVGYLTEIAALVVQERMRVDGDDMGWNWMEQFLYWAKANSKYGSAAPGDESLESPPPFPS--DNGGDGGIGEERGARGKRVKAAFGAAGVGMGGTDEDRKTRGNRMLEEMLMGQKVQTFDFKKNDLVGVDPAEIGQLVMDARIEVARRISTALETVPADHGLVLRRYLEDKWEA 472          
BLAST of mRNA_D-dichotoma_M_contig950.20227.1 vs. uniprot
Match: A0A835YQU4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQU4_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 4.490e-18
Identity = 110/434 (25.35%), Postives = 169/434 (38.94%), Query Frame = 0
Query:  110 LERRVKDMLVERAIDTAEYYWSETGGEIYRKWLGNFGKELEMGEDVVNKLGWARYLLKMMEAEPEESVIVRTVMKDSDEVIAAREKNNA-RPPTLSPWRHTANQLSADWDEDEMEEMKMALDYPPQFQTVKKEVVVQPVDVAKRVMAIREQLAVEWTEDLANIEGENEEIKRLEKEMRQRVGEDA--AESERRLTYDH------GEAFG---------GDSTPFRADSYET--------------------------LVSYLTEIGALAVQEKMRIDGDEMGWQWMEQFLYWTKANSKSGLAGSESAANPPRSPSASRKSGRGVGGEGAGARGKEVSAMFGQAGGGMHETEDEKKIRGNRLLEEMMAGPKMQMVDTK----TGEMIGVDPPKICGLVMAARLGVAERIKSALRSVPADHGLVLRRYLEGKWKAS 495
            +ER VK++L  +A  + +YYW E   E+  +WL    KE E     V ++GW  +L  +M  EPEE     TV K     +A R K  +   P LS  RH                   A++Y          V+++P  +AKR+M +REQLA EW +DL  +E EN E+ R   +    +  DA  A+S R+L +DH      GE            G   P+R  +Y                            L++ +T +     + ++R  G      W+E+F+                            K G+G                                ++GN LLE M+ GP M M++ K    + +   ++P +I   VM  R   AE I++ L +VP DH  +    LE +W A+
Sbjct:   61 MERSVKNLLAVQASASVQYYWMEFRDELQPRWL----KEFEEAGHNVGQVGWDHFLGSLMRTEPEEV----TVRK-----MAQRPKGGSGNNPFLSDTRH-------------------AMEYT---------VLIEPFQIAKRIMTVREQLAQEWIKDLELVETENAELLRHHVDT---LSMDAKQADSSRQLVFDHDPCAVEGEVLXXXXXXXXXYGTKLPYRGKNYRADSSRXXXXXXXXXXXXXXXXXXXXXELLAMVTRVAVRRYEAELRQSGHRYHQNWLERFML---------------------------KGGKG--------------------------------LKGNALLESMLNGP-MMMINPKVRGNSDKPRVIEPAQIAKGVMLRRATAAEEIRTILGTVPGDHLRLKASMLEQQWSAT 390          
BLAST of mRNA_D-dichotoma_M_contig950.20227.1 vs. uniprot
Match: A0A835Z7Q1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Q1_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 2.570e-9
Identity = 64/258 (24.81%), Postives = 112/258 (43.41%), Query Frame = 0
Query:  111 ERRVKDMLVERAIDTAEYYWSETGGEIYRKWLGNFGKELEMGEDVVNKLGWARYLLKMMEAEPEESVIVRTVMKDSDEVIAAREKNNARPPTLSPWRHTANQLSADWDEDEMEEMKMALDYPPQFQTVKKEVVVQPVDVAKRVMAIREQLAVEWTEDLANIEGENEEIKRL------------EKEMRQRVGEDAAESERRLTYD---HGEAFGGDSTPFRADSYETLVSYLTEIGALAVQEKMRIDGDEMGWQWMEQ 353
            ERR+K++L E+++ TA YYW E  G +Y +++  F +    G  VV + GW  +L  ++ + PEE +I + V K        R  +   P                              Y    + V    V++P+ + +R++ IR QLA E   DL  IE ENE                 + E+R  + E  A   R  T+      +A     TP+R+  Y  +++ +T++     ++++RI GD+    W+++
Sbjct:    9 ERRLKNVLTEKSLQTAMYYWLELRGNMYSEYMARFTEGEGGGGSVVAR-GWRTFLSNLLSSPPEEVIIEKVVKKP-------RGGSGTNP------------------------------YLAARKVVSYTEVIEPMTLGRRILDIRAQLAAELFHDLELIESENERXXXXXXXXXXXVQQFYQDELRYGIKE--ATRLRLRTWQPVVDTDAINSTDTPYRSSLYLAVLALVTKVSLERYKKELRIVGDKHTLAWLDK 226          
BLAST of mRNA_D-dichotoma_M_contig950.20227.1 vs. uniprot
Match: A0A7S0ZIK8_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZIK8_9RHOD)

HSP 1 Score: 63.2 bits (152), Expect = 4.740e-7
Identity = 62/242 (25.62%), Postives = 102/242 (42.15%), Query Frame = 0
Query:  116 DMLVERAIDTAEYYWSETGGEIYRKWLGNFG--KELEMGEDVVNKLGWARYLLKMMEAEPEESVIVRTVMKDSDEVIAAREKNNARPPTLSPWRHTANQLSADWDEDEMEEMKMALDYPPQFQTVKKEVVVQPVDVAKRVMAIREQLAVEWTEDLANIEGENEEIKRLEKEMRQRVGEDAAESERRLTYDHGEAFGGDSTPFRADSYETLVSYLTEIGALAVQEKMRIDGDEMGWQWMEQFL 355
            D L  R+++T  YY+ E      + WL  F   KE E+G    ++     +LLKMM + PE+ V                                                 M + +P  +   +    ++P  +A+R++AIREQL+VEW +DL  I  EN E++RL  E+  +    + +S R+   D  + F  D++  R+ +Y  L   LT   + AV + +    D   + W+E FL
Sbjct:   92 DFLTRRSVNTLIYYFDEFHDGPSKNWLEKFENFKEREIGFTQSDE-----FLLKMMSSRPEKGV-------------------------------------------------MTVSHPKGYFKRQFPFTIEPRRIAERILAIREQLSVEWKKDLRLISSENNELQRLHLELALQPNI-SLDSIRKKILD-SDPFANDTSALRSSNYRKLKVLLTHHASYAVLQDLH-KSDNHSYMWLESFL 276          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig950.20227.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KLJ1_9PHAE2.260e-16059.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YQU4_9STRA4.490e-1825.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z7Q1_9STRA2.570e-924.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0ZIK8_9RHOD4.740e-725.62Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 261..291
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..517
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..28
score: 0.57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig950contigD-dichotoma_M_contig950:79587..152018 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig950.20227.1mRNA_D-dichotoma_M_contig950.20227.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig950 78990..152116 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig950.20227.1 ID=prot_D-dichotoma_M_contig950.20227.1|Name=mRNA_D-dichotoma_M_contig950.20227.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=518bp
MLQHILAHAPCVLLANLLIGYSTKVTLGFVPSSVAHYGETYVQSRQYSAA
QAFHQDGLLGLRRWTSKARASEAWNGEKLHFQRSATRKLNTHLFASRKNR
GSFSWDEDVLERRVKDMLVERAIDTAEYYWSETGGEIYRKWLGNFGKELE
MGEDVVNKLGWARYLLKMMEAEPEESVIVRTVMKDSDEVIAAREKNNARP
PTLSPWRHTANQLSADWDEDEMEEMKMALDYPPQFQTVKKEVVVQPVDVA
KRVMAIREQLAVEWTEDLANIEGENEEIKRLEKEMRQRVGEDAAESERRL
TYDHGEAFGGDSTPFRADSYETLVSYLTEIGALAVQEKMRIDGDEMGWQW
MEQFLYWTKANSKSGLAGSESAANPPRSPSASRKSGRGVGGEGAGARGKE
VSAMFGQAGGGMHETEDEKKIRGNRLLEEMMAGPKMQMVDTKTGEMIGVD
PPKICGLVMAARLGVAERIKSALRSVPADHGLVLRRYLEGKWKASPVGEE
GEAEMEGGGGVDSDGDS*
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