prot_D-dichotoma_M_contig95.20224.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig95.20224.1
Unique Nameprot_D-dichotoma_M_contig95.20224.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length174
Homology
BLAST of mRNA_D-dichotoma_M_contig95.20224.1 vs. uniprot
Match: A0A6H5KA78_9PHAE (TRASH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA78_9PHAE)

HSP 1 Score: 286 bits (731), Expect = 1.090e-96
Identity = 148/173 (85.55%), Postives = 162/173 (93.64%), Query Frame = 0
Query:    1 MVRIEVCYFCSSRVYPGHGITFVRNDSKVFRFCRSKCHKNFVRKRNPRKSKWTKSFRKAAGKEMTVDSTFDFEKRRNRPVKYDREMMGKTLLAMKKVKEIQAKREQRFFENRHRGAKAKEKAAIKAEIKDNIELLAPAAA-DREKALLTVTDKAKQKAAAAAAKSRAAMETED 172
            MVRIE+CYFCSSR+YPGHGI F RNDSKVFRFCRSKCHKNF RKRNPRKSKWTK+FR+AAGKEM+VD+TFDFEKRRNRPVKYDRE MGKTLLAMKKVKE+QAKRE+RFFENRH+GA AKEKAAIKAEIKDNIELLAPAAA DREK L  ++DKAKQKA+AAA+K+R  METED
Sbjct:    1 MVRIEICYFCSSRIYPGHGIVFARNDSKVFRFCRSKCHKNFTRKRNPRKSKWTKAFRRAAGKEMSVDTTFDFEKRRNRPVKYDREAMGKTLLAMKKVKEVQAKREKRFFENRHKGALAKEKAAIKAEIKDNIELLAPAAAVDREKTLTAISDKAKQKASAAASKARTLMETED 173          
BLAST of mRNA_D-dichotoma_M_contig95.20224.1 vs. uniprot
Match: A0A835Z8F8_9STRA (RL30, ribosomal protein 30 60S large ribosomal subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8F8_9STRA)

HSP 1 Score: 239 bits (611), Expect = 2.700e-78
Identity = 117/156 (75.00%), Postives = 139/156 (89.10%), Query Frame = 0
Query:    1 MVRIEVCYFCSSRVYPGHGITFVRNDSKVFRFCRSKCHKNFVRKRNPRKSKWTKSFRKAAGKEMTVDSTFDFEKRRNRPVKYDREMMGKTLLAMKKVKEIQAKREQRFFENRHRGAKAKEKAAIKAEIKDNIELLAPAAADREKALLTVTDKAKQK 156
            MVR+EVCYFCS  +YPGHG+ FVRND+KVF+FCRSKCHKNF++KRNPRK KWTK++RKAAGKEMTVD+TFDFEKRRNRPVKYDRE+MGKTLLAMKKV E+QA+RE+RFF+ RH+   A+EKAAI+ E++ NIELL PAAADREKAL  V +  +QK
Sbjct:    1 MVRVEVCYFCSGPMYPGHGVQFVRNDAKVFKFCRSKCHKNFIKKRNPRKMKWTKAYRKAAGKEMTVDTTFDFEKRRNRPVKYDRELMGKTLLAMKKVTEVQAQREKRFFDVRHKDKAAREKAAIRTEVEQNIELLVPAAADREKALANVKEVIRQK 156          
BLAST of mRNA_D-dichotoma_M_contig95.20224.1 vs. uniprot
Match: W7T7Z2_9STRA (Ribosome biogenesis protein rlp24 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T7Z2_9STRA)

HSP 1 Score: 218 bits (554), Expect = 1.760e-68
Identity = 105/155 (67.74%), Postives = 135/155 (87.10%), Query Frame = 0
Query:    2 VRIEVCYFCSSRVYPGHGITFVRNDSKVFRFCRSKCHKNFVRKRNPRKSKWTKSFRKAAGKEMTVDSTFDFEKRRNRPVKYDREMMGKTLLAMKKVKEIQAKREQRFFENRHRGAKAKEKAAIKAEIKDNIELLAPAAADREKALLTVTDKAKQK 156
            +RI  CYFCS  +YPGHG TFVRND+KVF FCRSKCH+NF +KRNPRK++WTK++RKAAGKEM VD+TFDFEKRRNRPVKYDR+++GKT+ AM+K++ IQ++RE+ F++ R R AK KEKAA++ E+K+N+ELLAPAAA REKALL V +K K++
Sbjct:   77 MRILKCYFCSGPMYPGHGTTFVRNDAKVFNFCRSKCHRNFNKKRNPRKTRWTKAYRKAAGKEMVVDATFDFEKRRNRPVKYDRDLVGKTVQAMQKIRTIQSRREEVFYQTRMREAKMKEKAALQVEVKENVELLAPAAASREKALLNVREKVKER 231          
BLAST of mRNA_D-dichotoma_M_contig95.20224.1 vs. uniprot
Match: A0A4D9CSX3_9STRA (TRASH domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CSX3_9STRA)

HSP 1 Score: 215 bits (547), Expect = 1.790e-68
Identity = 104/153 (67.97%), Postives = 132/153 (86.27%), Query Frame = 0
Query:    2 VRIEVCYFCSSRVYPGHGITFVRNDSKVFRFCRSKCHKNFVRKRNPRKSKWTKSFRKAAGKEMTVDSTFDFEKRRNRPVKYDREMMGKTLLAMKKVKEIQAKREQRFFENRHRGAKAKEKAAIKAEIKDNIELLAPAAADREKALLTVTDKAK 154
            +RI  CYFCS  +YPGHG TFVRND+KVF FCRSKCH+NF +KRNPRK++WTK++RKAAGKEM VD+TFDFEKRRNRPVKYDR+++GKT+ AM+K++ IQ++RE+ F++ R R AK KEKAA++ E+K+N+ELLAPAAA REK LL V +K K
Sbjct:    1 MRILKCYFCSGPMYPGHGTTFVRNDAKVFNFCRSKCHRNFNKKRNPRKARWTKAYRKAAGKEMVVDATFDFEKRRNRPVKYDRDLVGKTVQAMQKIRTIQSRREEVFYQTRMREAKMKEKAALQVEVKENVELLAPAAASREKVLLNVREKVK 153          
BLAST of mRNA_D-dichotoma_M_contig95.20224.1 vs. uniprot
Match: A0A7S2DM88_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DM88_9STRA)

HSP 1 Score: 213 bits (542), Expect = 7.440e-68
Identity = 108/169 (63.91%), Postives = 135/169 (79.88%), Query Frame = 0
Query:    1 MVRIEVCYFCSSRVYPGHGITFVRNDSKVFRFCRSKCHKNFVRKRNPRKSKWTKSFRKAAGKEMTVDSTFDFEKRRNRPVKYDREMMGKTLLAMKKVKEIQAKREQRFFENRHRGAKAKEKAAIKAEIKDNIELLAPAAADREKALLTVTDKAKQKAAAAAAKSRAAME 169
            MVR+E CYFCS  +YPGHGI FVRND+KVF+FCRSKCHKNF+RKRNPRK+ WTK+FR+A  KEMTVDST DFEKRRNRPVKYDRE++G TL AM++VKEI  +RE+ F+  R + +K  ++ A K E+K+N+E+LAPAAA +EK LL + D A+ KAAA    + A ME
Sbjct:    8 MVRVETCYFCSGPLYPGHGIQFVRNDAKVFKFCRSKCHKNFIRKRNPRKTAWTKAFRRARKKEMTVDSTLDFEKRRNRPVKYDRELVGTTLRAMQRVKEIHTRREEIFYAKRMKESKTIQRQAAKVELKENMEILAPAAAQKEKVLLNIADHARVKAAAQRRTAAAKME 176          
BLAST of mRNA_D-dichotoma_M_contig95.20224.1 vs. uniprot
Match: A0A448YUA5_9STRA (TRASH domain-containing protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448YUA5_9STRA)

HSP 1 Score: 212 bits (540), Expect = 1.400e-67
Identity = 107/158 (67.72%), Postives = 131/158 (82.91%), Query Frame = 0
Query:    2 VRIEVCYFCSSRVYPGHGITFVRNDSKVFRFCRSKCHKNFVRKRNPRKSKWTKSFRKAAGKEMTVDSTFDFEKRRNRPVKYDREMMGKTLLAMKKVKEIQAKREQRFFENRHRGAKAKEKAAIKAEIKDNIELLAPAAADREKALLTVTDKAKQKAAA 159
            +RIE CYFCSS  YPGHGITFVRNDSK FRFCRSKCH+NF +KRNPRK  WTK++RK  GKEM VDSTFDFEKRRNRPVKYDR++MGKT+LAM++V+ I+  REQRFF+NR + +KA++K   + EI+ +IELLAPA A+RE+ +  V D AKQ+ AA
Sbjct:    1 MRIEKCYFCSSPCYPGHGITFVRNDSKQFRFCRSKCHRNFNKKRNPRKVAWTKAYRKTRGKEMAVDSTFDFEKRRNRPVKYDRDLMGKTILAMRRVESIKKAREQRFFDNRVKDSKAEKKQQARVEIEKSIELLAPAVANREQVMRNVIDSAKQRIAA 158          
BLAST of mRNA_D-dichotoma_M_contig95.20224.1 vs. uniprot
Match: A0A1E7FH63_9STRA (60S ribosomal protein L24 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FH63_9STRA)

HSP 1 Score: 209 bits (533), Expect = 2.180e-66
Identity = 107/158 (67.72%), Postives = 129/158 (81.65%), Query Frame = 0
Query:    2 VRIEVCYFCSSRVYPGHGITFVRNDSKVFRFCRSKCHKNFVRKRNPRKSKWTKSFRKAAGKEMTVDSTFDFEKRRNRPVKYDREMMGKTLLAMKKVKEIQAKREQRFFENRHRGAKAKEKAAIKAEIKDNIELLAPAAADREKALLTVTDKAKQKAAA 159
            +RIE CYFCSS  YPGHG+TFVRNDSK FRFCRSKCH+NF +KRNPRK  WTK++RK  GKEM VDSTFDFEKRRNRPVKYDR++MGKT+LAMK+V+ I+  RE+RFFENR   AKA++K   + EI+ +IELLAPA A+RE+ +  V D AK + AA
Sbjct:    1 MRIEKCYFCSSPCYPGHGMTFVRNDSKQFRFCRSKCHRNFNKKRNPRKVAWTKAYRKTRGKEMAVDSTFDFEKRRNRPVKYDRDLMGKTILAMKRVETIKKAREERFFENRMSDAKAEKKKQARVEIEKSIELLAPAVANREQVMRNVIDSAKLRIAA 158          
BLAST of mRNA_D-dichotoma_M_contig95.20224.1 vs. uniprot
Match: A0A6U3SB39_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SB39_9STRA)

HSP 1 Score: 205 bits (521), Expect = 1.360e-64
Identity = 101/157 (64.33%), Postives = 128/157 (81.53%), Query Frame = 0
Query:    2 VRIEVCYFCSSRVYPGHGITFVRNDSKVFRFCRSKCHKNFVRKRNPRKSKWTKSFRKAAGKEMTVDSTFDFEKRRNRPVKYDREMMGKTLLAMKKVKEIQAKREQRFFENRHRGAKAKEKAAIKAEIKDNIELLAPAAADREKALLTVTDKAKQKAA 158
            +RIE CYFCSS  YPGHG+ FVRNDSK FRFCRSKCH+NF +KRNPRK  WTK++RK  GKE+ +DSTF+FEKRRNRPVKYDR +MGKT+LAM++V+ I+ KRE+RFF NR + AK ++KA  + EI+  IELLAPA A+RE+ +  V DKA+++ A
Sbjct:    1 MRIEKCYFCSSPCYPGHGMVFVRNDSKQFRFCRSKCHRNFNKKRNPRKVAWTKAYRKTRGKELAIDSTFEFEKRRNRPVKYDRNLMGKTILAMQRVQAIKEKREERFFANRMKDAKKEQKAQARVEIEKGIELLAPAVANREEVMRNVVDKARERIA 157          
BLAST of mRNA_D-dichotoma_M_contig95.20224.1 vs. uniprot
Match: A0A7S0PX55_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0PX55_9STRA)

HSP 1 Score: 203 bits (516), Expect = 7.350e-64
Identity = 100/158 (63.29%), Postives = 127/158 (80.38%), Query Frame = 0
Query:    2 VRIEVCYFCSSRVYPGHGITFVRNDSKVFRFCRSKCHKNFVRKRNPRKSKWTKSFRKAAGKEMTVDSTFDFEKRRNRPVKYDREMMGKTLLAMKKVKEIQAKREQRFFENRHRGAKAKEKAAIKAEIKDNIELLAPAAADREKALLTVTDKAKQKAAA 159
            +R+E CYFCSS  YPGHG+ FVRNDSK FRFCRSKCH+NF +KRNPRK  WTK++RK  GKEM +DSTF+FEKRRNRPVKYDR++MGKT+LAM++V+ I+  RE+RFF NR + AKA++K   + EI+ +IELLAPA A RE+ +  V D A+ + AA
Sbjct:    1 MRVEKCYFCSSPCYPGHGMMFVRNDSKTFRFCRSKCHRNFNKKRNPRKVAWTKAYRKTRGKEMAIDSTFEFEKRRNRPVKYDRDLMGKTILAMQRVQNIKENREERFFANRMKDAKAEKKQQARVEIEKSIELLAPAVASREQVMKNVVDSARARIAA 158          
BLAST of mRNA_D-dichotoma_M_contig95.20224.1 vs. uniprot
Match: A0A812VXV3_SYMMI (Rsl24d1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VXV3_SYMMI)

HSP 1 Score: 200 bits (509), Expect = 5.960e-63
Identity = 104/157 (66.24%), Postives = 126/157 (80.25%), Query Frame = 0
Query:    2 VRIEVCYFCSSRVYPGHGITFVRNDSKVFRFCRSKCHKNFVRKRNPRKSKWTKSFRKAAGKEMTVDSTFDFEKRRNRPVKYDREMMGKTLLAMKKVKEIQAKREQRFFENRHRGAKAKEKAAIKAEIKDNIELLAPAAADREKALLTVTDKAKQKAA 158
            +RI  CYFCSS VYPGHG+TFVRNDSK F FCRSKCHKNF +KRNPRK KWTK+FRK AGKEMTVDSTF+FEKRRNRP+KY+RE+MG TL AMKKV +I+ KR+  FF+ R R  KAK++  ++A+I   IE++AP AA+RE A+    + AKQK A
Sbjct:    1 MRIGTCYFCSSPVYPGHGVTFVRNDSKTFEFCRSKCHKNFNKKRNPRKMKWTKAFRKHAGKEMTVDSTFEFEKRRNRPIKYNRELMGTTLRAMKKVSDIKHKRQDLFFKMRMRAHKAKQRDEVRADIAKGIEIIAPGAANREAAI----EIAKQKVA 153          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig95.20224.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KA78_9PHAE1.090e-9685.55TRASH domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835Z8F8_9STRA2.700e-7875.00RL30, ribosomal protein 30 60S large ribosomal sub... [more]
W7T7Z2_9STRA1.760e-6867.74Ribosome biogenesis protein rlp24 n=1 Tax=Nannochl... [more]
A0A4D9CSX3_9STRA1.790e-6867.97TRASH domain-containing protein n=2 Tax=Monodopsid... [more]
A0A7S2DM88_9STRA7.440e-6863.91Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A448YUA5_9STRA1.400e-6767.72TRASH domain-containing protein n=2 Tax=Pseudo-nit... [more]
A0A1E7FH63_9STRA2.180e-6667.7260S ribosomal protein L24 n=1 Tax=Fragilariopsis c... [more]
A0A6U3SB39_9STRA1.360e-6464.33Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S0PX55_9STRA7.350e-6463.29Hypothetical protein n=1 Tax=Asterionellopsis glac... [more]
A0A812VXV3_SYMMI5.960e-6366.24Rsl24d1 protein n=1 Tax=Symbiodinium microadriatic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011017TRASH domainSMARTSM007464TRASHcoord: 7..45
e-value: 2.2E-9
score: 47.2
IPR000988Ribosomal protein L24e-relatedPFAMPF01246Ribosomal_L24ecoord: 3..66
e-value: 6.9E-31
score: 106.3
IPR000988Ribosomal protein L24e-relatedPANTHERPTHR1079260S RIBOSOMAL PROTEIN L24coord: 3..152
IPR038630Ribosomal protein L24e/L24 superfamilyGENE3D2.30.170.20coord: 2..69
e-value: 4.4E-29
score: 102.3
NoneNo IPR availablePANTHERPTHR10792:SF8RIBOSOME BIOGENESIS PROTEIN RLP24-RELATEDcoord: 3..152
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 5..57
IPR023442Ribosomal protein L24e, conserved sitePROSITEPS01073RIBOSOMAL_L24Ecoord: 9..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig95contigD-dichotoma_M_contig95:472490..486487 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig95.20224.1mRNA_D-dichotoma_M_contig95.20224.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig95 472040..487237 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig95.20224.1 ID=prot_D-dichotoma_M_contig95.20224.1|Name=mRNA_D-dichotoma_M_contig95.20224.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=174bp
MVRIEVCYFCSSRVYPGHGITFVRNDSKVFRFCRSKCHKNFVRKRNPRKS
KWTKSFRKAAGKEMTVDSTFDFEKRRNRPVKYDREMMGKTLLAMKKVKEI
QAKREQRFFENRHRGAKAKEKAAIKAEIKDNIELLAPAAADREKALLTVT
DKAKQKAAAAAAKSRAAMETEDA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011017TRASH_dom
IPR000988Ribosomal_L24e-rel
IPR038630L24e/L24_sf
IPR023442Ribosomal_L24e_CS