prot_D-dichotoma_M_contig95.20209.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig95.20209.1
Unique Nameprot_D-dichotoma_M_contig95.20209.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length83
Homology
BLAST of mRNA_D-dichotoma_M_contig95.20209.1 vs. uniprot
Match: A0A835YQX6_9STRA (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQX6_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 7.080e-23
Identity = 47/80 (58.75%), Postives = 58/80 (72.50%), Query Frame = 0
Query:    2 RALSNLAIQNFAAPGQPGWHLGTLFPAGSSPQETDQFKAYIRQCREELAKRLGNRVYQEDGSRNKHWMLFSKRKFMGKEM 81
            RAL+ LA + FAAPG+ GW LGT+FPA     E + FKAY +QCREEL  RL  RV+  DG+++K W  FSKR+FMGKEM
Sbjct:   95 RALNLLANKTFAAPGEAGWQLGTIFPAPRVRDEAEMFKAYFKQCREELGTRLIERVF-ADGTKSKWWQFFSKRRFMGKEM 173          
BLAST of mRNA_D-dichotoma_M_contig95.20209.1 vs. uniprot
Match: A0A7R9YBM6_9STRA (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBM6_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 5.960e-22
Identity = 44/80 (55.00%), Postives = 57/80 (71.25%), Query Frame = 0
Query:    2 RALSNLAIQNFAAPGQPGWHLGTLFPAGSSPQETDQFKAYIRQCREELAKRLGNRVYQEDGSRNKHWMLFSKRKFMGKEM 81
            R +  +  + FA PG P W LGT+FPA SS  E+D FKAY +Q REE A+RL  ++Y+EDG++NK W +F KRKFMG EM
Sbjct:   94 RKVLEVGARPFAVPGDPEWVLGTMFPAPSSRTESDAFKAYFKQAREETAERLLAKLYKEDGTKNKWWAMFGKRKFMGLEM 173          
BLAST of mRNA_D-dichotoma_M_contig95.20209.1 vs. uniprot
Match: A0A7S3HGH0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HGH0_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 9.980e-21
Identity = 43/81 (53.09%), Postives = 57/81 (70.37%), Query Frame = 0
Query:    1 MRALSNLAIQNFAAPGQPGWHLGTLFPAGSSPQETDQFKAYIRQCREELAKRLGNRVYQEDGSRNKHWMLFSKRKFMGKEM 81
            +R L  L+ + FA PG+ G+ LG LFPA ++  E+D F+ Y +Q REELA RL  RV+  DGS+NK W  FSK+KFMGKE+
Sbjct:   41 IRELRALSTKPFAVPGEAGFPLGGLFPAPANKTESDLFRTYFKQAREELAVRLCERVFDADGSKNKWWQAFSKKKFMGKEL 121          
BLAST of mRNA_D-dichotoma_M_contig95.20209.1 vs. uniprot
Match: A0A7S2RMH4_9STRA (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RMH4_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 3.390e-20
Identity = 40/80 (50.00%), Postives = 54/80 (67.50%), Query Frame = 0
Query:    2 RALSNLAIQNFAAPGQPGWHLGTLFPAGSSPQETDQFKAYIRQCREELAKRLGNRVYQEDGSRNKHWMLFSKRKFMGKEM 81
            +AL  LA++ FA PG   W +G+++PA  S  E +  KAY +QCREEL +R    ++  DGS+NK W  FSKRKFMGKE+
Sbjct:  104 KALQQLALRQFAIPGDTNWAMGSMYPAPKSTAEGEGCKAYFKQCREELGRRFSQVLFLPDGSKNKWWQAFSKRKFMGKEL 183          
BLAST of mRNA_D-dichotoma_M_contig95.20209.1 vs. uniprot
Match: A0A7S1U2P7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2P7_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 1.310e-19
Identity = 43/81 (53.09%), Postives = 57/81 (70.37%), Query Frame = 0
Query:    2 RALSNLAIQNFAAPGQPGWHLGTLFPAGSSPQETDQFKAYIRQCREELAKRLGNRVYQEDGSRNKHWMLFSKRKFMGKEMT 82
            R L   AI+NFA PG+ GW LGTLFP  +   E++ FKAY +Q REE+++RL  ++Y  D  +NK W +FSKRKFMG +MT
Sbjct:  135 RQLQLSAIRNFAVPGEAGWALGTLFPPPADRNESETFKAYFKQAREEMSERLIAKLY-TDAGKNKWWAMFSKRKFMGIDMT 214          
BLAST of mRNA_D-dichotoma_M_contig95.20209.1 vs. uniprot
Match: A0A7S3RKI3_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3RKI3_EMIHU)

HSP 1 Score: 84.0 bits (206), Expect = 4.400e-19
Identity = 40/81 (49.38%), Postives = 59/81 (72.84%), Query Frame = 0
Query:    1 MRALSNLAIQNFAAPGQPGWHLGTLFPAGSSPQETDQFKAYIRQCREELAKRLGNRVYQEDGSRNKHWMLFSKRKFMGKEM 81
            ++AL+ LA + F+APG+P + L + FPAG+SP E D  +AY++Q REEL +RL  +VY ++G  +K W+ FSKRKFM K +
Sbjct:   41 VKALTALAHEAFSAPGEPRFALASFFPAGASPAELDLCRAYLKQAREELGRRLALKVYGDNGPPSKLWIAFSKRKFMNKAL 121          
BLAST of mRNA_D-dichotoma_M_contig95.20209.1 vs. uniprot
Match: R1DRS6_EMIHU (Actin-related protein 2/3 complex subunit 3 n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DRS6_EMIHU)

HSP 1 Score: 84.0 bits (206), Expect = 1.590e-18
Identity = 40/81 (49.38%), Postives = 59/81 (72.84%), Query Frame = 0
Query:    1 MRALSNLAIQNFAAPGQPGWHLGTLFPAGSSPQETDQFKAYIRQCREELAKRLGNRVYQEDGSRNKHWMLFSKRKFMGKEM 81
            ++AL+ LA + F+APG+P + L + FPAG+SP E D  +AY++Q REEL +RL  +VY ++G  +K W+ FSKRKFM K +
Sbjct:   93 VKALTALAHEAFSAPGEPRFALASFFPAGASPAELDLCRAYLKQAREELGRRLALKVYGDNGPPSKLWIAFSKRKFMNKAL 173          
BLAST of mRNA_D-dichotoma_M_contig95.20209.1 vs. uniprot
Match: A0A7S2FM82_9STRA (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FM82_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 3.090e-18
Identity = 36/78 (46.15%), Postives = 54/78 (69.23%), Query Frame = 0
Query:    4 LSNLAIQNFAAPGQPGWHLGTLFPAGSSPQETDQFKAYIRQCREELAKRLGNRVYQEDGSRNKHWMLFSKRKFMGKEM 81
            L  L I++F  PG+ GW LG +FP  +SP + D F+AY +QC+ E+ +R+   +Y  DG++NK W +F+KRKFMGK +
Sbjct:   80 LHALEIKSFPVPGEQGWTLGGMFPNPTSPADADAFRAYFKQCKVEIGRRVLEILYLPDGTKNKWWNMFAKRKFMGKTL 157          
BLAST of mRNA_D-dichotoma_M_contig95.20209.1 vs. uniprot
Match: A0A7S2FM28_9STRA (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FM28_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 5.860e-18
Identity = 36/78 (46.15%), Postives = 54/78 (69.23%), Query Frame = 0
Query:    4 LSNLAIQNFAAPGQPGWHLGTLFPAGSSPQETDQFKAYIRQCREELAKRLGNRVYQEDGSRNKHWMLFSKRKFMGKEM 81
            L  L I++F  PG+ GW LG +FP  +SP + D F+AY +QC+ E+ +R+   +Y  DG++NK W +F+KRKFMGK +
Sbjct:  108 LHALEIKSFPVPGEQGWTLGGMFPNPTSPADADAFRAYFKQCKVEIGRRVLEILYLPDGTKNKWWNMFAKRKFMGKTL 185          
BLAST of mRNA_D-dichotoma_M_contig95.20209.1 vs. uniprot
Match: F0Y6P7_AURAN (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6P7_AURAN)

HSP 1 Score: 82.0 bits (201), Expect = 9.370e-18
Identity = 39/80 (48.75%), Postives = 53/80 (66.25%), Query Frame = 0
Query:    2 RALSNLAIQNFAAPGQPGWHLGTLFPAGSSPQETDQFKAYIRQCREELAKRLGNRVYQEDGSRNKHWMLFSKRKFMGKEM 81
            +AL  L I+ F  PG PGW LG +FP     QE + ++ Y++Q REEL+ R  + ++  DGS+NK W  FSKRKFMGKE+
Sbjct:   95 KALHALVIKQFPIPGGPGWSLGGMFPTPGDIQEGESWRLYMKQAREELSLRTLDVLFYSDGSKNKWWASFSKRKFMGKEL 174          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig95.20209.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YQX6_9STRA7.080e-2358.75Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
A0A7R9YBM6_9STRA5.960e-2255.00Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
A0A7S3HGH0_9STRA9.980e-2153.09Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2RMH4_9STRA3.390e-2050.00Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
A0A7S1U2P7_9STRA1.310e-1953.09Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3RKI3_EMIHU4.400e-1949.38Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
R1DRS6_EMIHU1.590e-1849.38Actin-related protein 2/3 complex subunit 3 n=3 Ta... [more]
A0A7S2FM82_9STRA3.090e-1846.15Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
A0A7S2FM28_9STRA5.860e-1846.15Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
F0Y6P7_AURAN9.370e-1848.75Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036753Actin-related protein 2/3 complex subunit 3 superfamilyGENE3D1.10.1760.10coord: 1..82
e-value: 7.6E-24
score: 86.4
IPR036753Actin-related protein 2/3 complex subunit 3 superfamilySUPERFAMILY69060Arp2/3 complex 21 kDa subunit ARPC3coord: 2..81
IPR007204Actin-related protein 2/3 complex subunit 3PFAMPF04062P21-Arccoord: 2..80
e-value: 8.2E-24
score: 84.6
IPR007204Actin-related protein 2/3 complex subunit 3PANTHERPTHR12391ARP2/3 COMPLEX 21 KD SUBUNITcoord: 2..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig95contigD-dichotoma_M_contig95:5926..11260 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig95.20209.1mRNA_D-dichotoma_M_contig95.20209.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig95 5214..11833 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig95.20209.1 ID=prot_D-dichotoma_M_contig95.20209.1|Name=mRNA_D-dichotoma_M_contig95.20209.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=83bp
MRALSNLAIQNFAAPGQPGWHLGTLFPAGSSPQETDQFKAYIRQCREELA
KRLGNRVYQEDGSRNKHWMLFSKRKFMGKEMT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036753ARPC3_sf
IPR007204ARPC3