prot_D-dichotoma_M_contig949.20208.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig949.20208.1
Unique Nameprot_D-dichotoma_M_contig949.20208.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length73
Homology
BLAST of mRNA_D-dichotoma_M_contig949.20208.1 vs. uniprot
Match: D7FM71_ECTSI (60S ribosomal protein L38 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM71_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 3.370e-39
Identity = 65/71 (91.55%), Postives = 69/71 (97.18%), Query Frame = 0
Query:    1 MPKQIHDIRDFLQKARRRDAKSVKIKNNKATNSTKFKIRCTRYLYTLCVTDKEKADKLTQSLPPGLRKQNI 71
            MPKQIHDIRDFLQKARRRDAKSVKIKNNKAT+STKFKIRC+RYLYTLCVTDKEKADKLTQSLPPGL K+ +
Sbjct:    1 MPKQIHDIRDFLQKARRRDAKSVKIKNNKATHSTKFKIRCSRYLYTLCVTDKEKADKLTQSLPPGLHKKQL 71          
BLAST of mRNA_D-dichotoma_M_contig949.20208.1 vs. uniprot
Match: A0A836CJ21_9STRA (Ribosomal protein L38 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ21_9STRA)

HSP 1 Score: 113 bits (282), Expect = 1.880e-31
Identity = 57/71 (80.28%), Postives = 64/71 (90.14%), Query Frame = 0
Query:    1 MPKQIHDIRDFLQKARRRDAKSVKIKNNKATNSTKFKIRCTRYLYTLCVTDKEKADKLTQSLPPGLRKQNI 71
            MPKQIHDIRDFLQKARR+DAKSVKIK  K    TKFKIRC+RYLYTLCV DK+KADKLTQSLPPGL++++I
Sbjct:    1 MPKQIHDIRDFLQKARRKDAKSVKIK--KTAEVTKFKIRCSRYLYTLCVADKDKADKLTQSLPPGLQRKDI 69          
BLAST of mRNA_D-dichotoma_M_contig949.20208.1 vs. uniprot
Match: W2IQQ0_PHYPR (60S ribosomal protein L38 n=16 Tax=Peronosporaceae TaxID=4777 RepID=W2IQQ0_PHYPR)

HSP 1 Score: 105 bits (263), Expect = 1.490e-28
Identity = 54/71 (76.06%), Postives = 63/71 (88.73%), Query Frame = 0
Query:    1 MPKQIHDIRDFLQKARRRDAKSVKIKNNKATNSTKFKIRCTRYLYTLCVTDKEKADKLTQSLPPGLRKQNI 71
            MPKQI DIRDFLQKARR+DA+SVKIK  K+    KFKIRC++YLYTLCVTD EKADKLTQSLPPGL++++I
Sbjct:    1 MPKQITDIRDFLQKARRKDARSVKIK--KSDKVVKFKIRCSKYLYTLCVTDTEKADKLTQSLPPGLQRKDI 69          
BLAST of mRNA_D-dichotoma_M_contig949.20208.1 vs. uniprot
Match: A0A485KGK6_9STRA (Aste57867_4412 protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KGK6_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.490e-28
Identity = 54/71 (76.06%), Postives = 62/71 (87.32%), Query Frame = 0
Query:    1 MPKQIHDIRDFLQKARRRDAKSVKIKNNKATNSTKFKIRCTRYLYTLCVTDKEKADKLTQSLPPGLRKQNI 71
            MPKQI DIRDFLQKARR+DA+SVKIK  K     KFKIRC++YLYTLCVTD EKADKLTQSLPPGL++++I
Sbjct:    1 MPKQITDIRDFLQKARRKDARSVKIK--KTAQVVKFKIRCSKYLYTLCVTDTEKADKLTQSLPPGLQRKDI 69          
BLAST of mRNA_D-dichotoma_M_contig949.20208.1 vs. uniprot
Match: A0A067CFE6_SAPPC (60S ribosomal protein L38 n=3 Tax=Oomycota TaxID=4762 RepID=A0A067CFE6_SAPPC)

HSP 1 Score: 105 bits (262), Expect = 2.120e-28
Identity = 54/71 (76.06%), Postives = 62/71 (87.32%), Query Frame = 0
Query:    1 MPKQIHDIRDFLQKARRRDAKSVKIKNNKATNSTKFKIRCTRYLYTLCVTDKEKADKLTQSLPPGLRKQNI 71
            MPKQI DIRDFLQKARR+DA+SVKIK  K     KFKIRC++YLYTLCVTD EKADKLTQSLPPGL++++I
Sbjct:    1 MPKQITDIRDFLQKARRKDARSVKIK--KTPQVVKFKIRCSKYLYTLCVTDTEKADKLTQSLPPGLQRKDI 69          
BLAST of mRNA_D-dichotoma_M_contig949.20208.1 vs. uniprot
Match: A0A1E7ETU4_9STRA (Ribosomal protein L38 n=2 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7ETU4_9STRA)

HSP 1 Score: 105 bits (262), Expect = 2.120e-28
Identity = 55/71 (77.46%), Postives = 62/71 (87.32%), Query Frame = 0
Query:    1 MPKQIHDIRDFLQKARRRDAKSVKIKNNKATNSTKFKIRCTRYLYTLCVTDKEKADKLTQSLPPGLRKQNI 71
            MPKQI DIRDFLQKARR DAK VKIK  K  + TKFKIRC+R+LYTLCVTD EKADKLTQSLPPGL++++I
Sbjct:    1 MPKQITDIRDFLQKARRSDAKLVKIK--KRDSQTKFKIRCSRFLYTLCVTDAEKADKLTQSLPPGLQRKSI 69          
BLAST of mRNA_D-dichotoma_M_contig949.20208.1 vs. uniprot
Match: M4BFU5_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BFU5_HYAAE)

HSP 1 Score: 105 bits (263), Expect = 2.530e-28
Identity = 54/71 (76.06%), Postives = 63/71 (88.73%), Query Frame = 0
Query:    1 MPKQIHDIRDFLQKARRRDAKSVKIKNNKATNSTKFKIRCTRYLYTLCVTDKEKADKLTQSLPPGLRKQNI 71
            MPKQI DIRDFLQKARR+DA+SVKIK  K+    KFKIRC++YLYTLCVTD EKADKLTQSLPPGL++++I
Sbjct:   20 MPKQITDIRDFLQKARRKDARSVKIK--KSDKVVKFKIRCSKYLYTLCVTDTEKADKLTQSLPPGLQRKDI 88          
BLAST of mRNA_D-dichotoma_M_contig949.20208.1 vs. uniprot
Match: F0Y0E5_AURAN (Ribosomal protein L38 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0E5_AURAN)

HSP 1 Score: 103 bits (256), Expect = 1.740e-27
Identity = 54/71 (76.06%), Postives = 61/71 (85.92%), Query Frame = 0
Query:    1 MPKQIHDIRDFLQKARRRDAKSVKIKNNKATNSTKFKIRCTRYLYTLCVTDKEKADKLTQSLPPGLRKQNI 71
            MPK+I DIRDFLQKARRRDAKSVKIK  K     KFKIRC+RYLYTL V+D EKADKLTQSLPPGL++++I
Sbjct:    1 MPKEISDIRDFLQKARRRDAKSVKIKKTKGV--VKFKIRCSRYLYTLRVSDTEKADKLTQSLPPGLQRKDI 69          
BLAST of mRNA_D-dichotoma_M_contig949.20208.1 vs. uniprot
Match: M4BFU6_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BFU6_HYAAE)

HSP 1 Score: 102 bits (255), Expect = 2.840e-27
Identity = 53/71 (74.65%), Postives = 60/71 (84.51%), Query Frame = 0
Query:    1 MPKQIHDIRDFLQKARRRDAKSVKIKNNKATNSTKFKIRCTRYLYTLCVTDKEKADKLTQSLPPGLRKQNI 71
            MPKQI DIRDFLQKARR+DA+SVKIK  K+    KFKIRC++YLYTLCVTD EKADKLTQSLPPG +  N+
Sbjct:    1 MPKQITDIRDFLQKARRKDARSVKIK--KSDKVVKFKIRCSKYLYTLCVTDTEKADKLTQSLPPGAQLTNL 69          
BLAST of mRNA_D-dichotoma_M_contig949.20208.1 vs. uniprot
Match: A0A0P1ACU3_PLAHL (60s ribosomal protein l38 n=10 Tax=Oomycota TaxID=4762 RepID=A0A0P1ACU3_PLAHL)

HSP 1 Score: 102 bits (254), Expect = 5.030e-27
Identity = 53/67 (79.10%), Postives = 59/67 (88.06%), Query Frame = 0
Query:    1 MPKQIHDIRDFLQKARRRDAKSVKIKNNKATNSTKFKIRCTRYLYTLCVTDKEKADKLTQSLPPGLR 67
            MPKQI DIRDFLQKARR+DA+SVKIK  K+    KFKIRC++YLYTLCVTD EKADKLTQSLPPGL+
Sbjct:    1 MPKQITDIRDFLQKARRKDARSVKIK--KSDKVVKFKIRCSKYLYTLCVTDTEKADKLTQSLPPGLQ 65          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig949.20208.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM71_ECTSI3.370e-3991.5560S ribosomal protein L38 n=2 Tax=Ectocarpus TaxID... [more]
A0A836CJ21_9STRA1.880e-3180.28Ribosomal protein L38 n=1 Tax=Tribonema minus TaxI... [more]
W2IQQ0_PHYPR1.490e-2876.0660S ribosomal protein L38 n=16 Tax=Peronosporaceae... [more]
A0A485KGK6_9STRA1.490e-2876.06Aste57867_4412 protein n=3 Tax=Saprolegniaceae Tax... [more]
A0A067CFE6_SAPPC2.120e-2876.0660S ribosomal protein L38 n=3 Tax=Oomycota TaxID=4... [more]
A0A1E7ETU4_9STRA2.120e-2877.46Ribosomal protein L38 n=2 Tax=Bacillariaceae TaxID... [more]
M4BFU5_HYAAE2.530e-2876.06Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
F0Y0E5_AURAN1.740e-2776.06Ribosomal protein L38 n=1 Tax=Aureococcus anophage... [more]
M4BFU6_HYAAE2.840e-2774.65Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A0P1ACU3_PLAHL5.030e-2779.1060s ribosomal protein l38 n=10 Tax=Oomycota TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002675Ribosomal protein L38ePFAMPF01781Ribosomal_L38ecoord: 2..71
e-value: 3.8E-34
score: 116.6
IPR002675Ribosomal protein L38ePANTHERPTHR1096560S RIBOSOMAL PROTEIN L38coord: 1..70
IPR038464Ribosomal protein L38e superfamilyGENE3D3.30.720.90coord: 1..72
e-value: 1.6E-33
score: 116.6
NoneNo IPR availablePANTHERPTHR10965:SF0RIBOSOMAL PROTEIN L38coord: 1..70
NoneNo IPR availablePRODOMPD010361coord: 1..66
e-value: 8.0E-23
score: 259.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig949contigD-dichotoma_M_contig949:207590..214951 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig949.20208.1mRNA_D-dichotoma_M_contig949.20208.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig949 207540..215556 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig949.20208.1 ID=prot_D-dichotoma_M_contig949.20208.1|Name=mRNA_D-dichotoma_M_contig949.20208.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=73bp
MPKQIHDIRDFLQKARRRDAKSVKIKNNKATNSTKFKIRCTRYLYTLCVT
DKEKADKLTQSLPPGLRKQNID*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002675Ribosomal_L38e
IPR038464Ribosomal_L38e_sf