prot_D-dichotoma_M_contig949.20207.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig949.20207.1
Unique Nameprot_D-dichotoma_M_contig949.20207.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length108
Homology
BLAST of mRNA_D-dichotoma_M_contig949.20207.1 vs. uniprot
Match: D7FM73_ECTSI (Fibronectin type-III domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM73_ECTSI)

HSP 1 Score: 152 bits (385), Expect = 5.310e-46
Identity = 75/110 (68.18%), Postives = 85/110 (77.27%), Query Frame = 0
Query:    1 MAVPLLKFKGCELDSITLAWERSETASYKLEFREILAPDWANSR-VESVPKGSPN---DFKVTDLNPSSSYIFRLYVVTSEGQEIGPGPEVAFDTEVVSCAPKQKTCCTI 106
            MAVP L+FK CELDSITL+WER+E   YKLEFREIL  DWA  R +   P+ S +     KVT LNPSSSYIFRLY VT+ GQE+GPGPE+AFDTEVVSCAP  K+CCTI
Sbjct:    1 MAVPQLQFKDCELDSITLSWERAEGTGYKLEFREILVSDWAGCRSIAIAPEQSSSTEMSTKVTGLNPSSSYIFRLYTVTAAGQEVGPGPEIAFDTEVVSCAPTNKSCCTI 110          
BLAST of mRNA_D-dichotoma_M_contig949.20207.1 vs. uniprot
Match: A0A835YPU1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPU1_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.290e-24
Identity = 45/104 (43.27%), Postives = 66/104 (63.46%), Query Frame = 0
Query:    3 VPLLKFKGCELDSITLAWERSETASYKLEFREILAPDWANSRVESVPKGSPND--FKVTDLNPSSSYIFRLYVVTSEGQEIGPGPEVAFDTEVVSCAPKQKTCC 104
            +P+L+F+ C+L+S+TL W       YKLEFR++    W ++    +P         KVTDL PS +YIFRL+++ + G+  GPGP+ AFDTEVVSC P  ++ C
Sbjct:    8 LPVLRFQSCDLESLTLEWAGEPGVEYKLEFRDVNRKGWDSAFSLRIPPSQTGHETVKVTDLLPSMTYIFRLWIMGAGGKLEGPGPDTAFDTEVVSCTPTSRSVC 111          
BLAST of mRNA_D-dichotoma_M_contig949.20207.1 vs. uniprot
Match: A0A7S2RXR2_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RXR2_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 6.140e-9
Identity = 34/89 (38.20%), Postives = 51/89 (57.30%), Query Frame = 0
Query:   15 SITLAWERSETA-SYKLEFREILAPD-WANSRVESVPKGSPNDFKVTDLNPSSSYIFRLYVVTSEGQEIGPGPEVAFDTEVVSCAPKQK 101
            S+ + W++++ A  YKL  R+I  PD W  ++V  +   +       DL P+S+Y +R+ VVT+EG E  P PE   DT V +C PK K
Sbjct:   44 SVDICWKKADGAIEYKLYQRKI--PDEWDKAKVIKISDPNQTKHVADDLEPTSTYQYRITVVTAEG-ESEPSPETTIDTAVGNCTPKPK 129          
BLAST of mRNA_D-dichotoma_M_contig949.20207.1 vs. uniprot
Match: A0A2R5GV16_9STRA (Fibronectin type-III domain-containing protein 3A n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GV16_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 1.910e-8
Identity = 35/89 (39.33%), Postives = 53/89 (59.55%), Query Frame = 0
Query:   15 SITLAWERSETA-SYKLEFREILAPD-WANSRVESVPKGSPNDFKVTDLNPSSSYIFRLYVVTSEGQEIGPGPEVAFDTEVVSCAPKQK 101
            S+ + W++ + A SYKL  R+I  PD W  ++V ++  GS     + DL P+S+Y FR+  VTSEG E     ++  DT V +C PK+K
Sbjct:   18 SVDIKWQKVDGATSYKLYRRKI--PDTWETAKVTTIG-GSETKVTLEDLEPTSTYQFRIAAVTSEG-EGAQSEDLTIDTAVANCTPKKK 102          
BLAST of mRNA_D-dichotoma_M_contig949.20207.1 vs. uniprot
Match: A0A6H5L9F0_9PHAE (Fibronectin type-III domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9F0_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 3.110e-6
Identity = 31/103 (30.10%), Postives = 49/103 (47.57%), Query Frame = 0
Query:    6 LKFKGCELDSITLAWERSETASYKLEFREILAPDWANS--RVESVPKGSPNDFKVTDLNPSSSYIFRLYVVTSEGQEIGPGPEVAFDTEVVSCAPKQKTCCTI 106
            L+ +     SI L W       Y +E++   + +W     R E    G+P+   V+ L PS+ Y+FRL+   +E Q   PGPEV F T+      ++  CC +
Sbjct:    7 LRCQSSNSTSIVLEWHE-RAPRYLVEYKRA-SEEWGGRGCRAEHTGCGAPSILVVSQLQPSTDYVFRLHSANAECQFGDPGPEVVFSTK-----GRKSGCCVV 102          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig949.20207.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FM73_ECTSI5.310e-4668.18Fibronectin type-III domain-containing protein n=2... [more]
A0A835YPU1_9STRA1.290e-2443.27Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2RXR2_9STRA6.140e-938.20Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A2R5GV16_9STRA1.910e-839.33Fibronectin type-III domain-containing protein 3A ... [more]
A0A6H5L9F0_9PHAE3.110e-630.10Fibronectin type-III domain-containing protein n=1... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 2..104
e-value: 3.9E-9
score: 38.7
IPR003961Fibronectin type IIIPFAMPF00041fn3coord: 4..79
e-value: 7.0E-8
score: 32.7
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 2..94
score: 10.801
IPR036116Fibronectin type III superfamilySUPERFAMILY49265Fibronectin type IIIcoord: 11..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig949contigD-dichotoma_M_contig949:127277..157514 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig949.20207.1mRNA_D-dichotoma_M_contig949.20207.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig949 125941..157594 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig949.20207.1 ID=prot_D-dichotoma_M_contig949.20207.1|Name=mRNA_D-dichotoma_M_contig949.20207.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=108bp
MAVPLLKFKGCELDSITLAWERSETASYKLEFREILAPDWANSRVESVPK
GSPNDFKVTDLNPSSSYIFRLYVVTSEGQEIGPGPEVAFDTEVVSCAPKQ
KTCCTIF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR003961FN3_dom
IPR036116FN3_sf