prot_D-dichotoma_M_contig946.20187.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_D-dichotoma_M_contig946.20187.1
Unique Name	prot_D-dichotoma_M_contig946.20187.1
Type	polypeptide
Organism	Dictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length	239

Homology

[Close]

BLAST of mRNA_D-dichotoma_M_contig946.20187.1 vs. uniprot
Match: A0A6H5JX16_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JX16_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 1.200e-53
Identity = 95/152 (62.50%), Postives = 116/152 (76.32%), Query Frame = 0

Query:   83 EDEIDTVQREADELEQMIRRSRGVVMEAVEREWREAMELTLEKEGGRLCAEAYKGFESRGCGCVFVNVDMGLSSNVHSLGDGQYHVVYRTLEEVVMERSSRVQSSDQMEIIQRCQQYDPEVGFVLVFGYKGLLGVQVIEPSRPPREVLLAHR 234
            EDE+D +QREA++LE MIR SRG+V+EA+EREWRE M   L +EG  LC+ AY+G+  RG G +FVNVDMGLSS+         H V+ +LEEVV ERSSRV+ +DQM+IIQRCQ+YDPE GFVLVFGYKG+LGVQVI PS  P EV  + R
Sbjct:   80 EDEVDVMQREAEQLEAMIRGSRGIVVEAIEREWREEMLRVLGEEGEMLCSLAYEGYLDRGRGVIFVNVDMGLSSSNKGHDGAPCHAVFCSLEEVVTERSSRVKPADQMQIIQRCQEYDPEAGFVLVFGYKGMLGVQVIRPSMAPGEVFRSRR 231

The following BLAST results are available for this feature:

BLAST of mRNA_D-dichotoma_M_contig946.20187.1 vs. uniprot

BLAST of mRNA_D-dichotoma_M_contig946.20187.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5JX16_9PHAE	1.200e-53	62.50	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 86..106
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 30..238
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..29
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..25 score: 0.602
None	No IPR available	TMHMM	TMhelix		coord: 12..34

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-dichotoma_M_contig946	contig	D-dichotoma_M_contig946:175516..186421 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_D-dichotoma_M_contig946.20187.1	mRNA_D-dichotoma_M_contig946.20187.1	Dictyota dichotoma ODC1387m male	mRNA	D-dichotoma_M_contig946 175269..187262 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_D-dichotoma_M_contig946.20187.1 ID=prot_D-dichotoma_M_contig946.20187.1|Name=mRNA_D-dichotoma_M_contig946.20187.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=239bp
MMRGYSRLADIVVKILCLCIPHVVSFVIVPSTGSLGRSCFTSFGGSDATA
SSVLPSLKILPGYQASSRPEGRLGSSPSEYPREDEIDTVQREADELEQMI
RRSRGVVMEAVEREWREAMELTLEKEGGRLCAEAYKGFESRGCGCVFVNV
DMGLSSNVHSLGDGQYHVVYRTLEEVVMERSSRVQSSDQMEIIQRCQQYD
PEVGFVLVFGYKGLLGVQVIEPSRPPREVLLAHRDKSE*