prot_D-dichotoma_M_contig945.20172.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_D-dichotoma_M_contig945.20172.1
Unique Name	prot_D-dichotoma_M_contig945.20172.1
Type	polypeptide
Organism	Dictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length	304

Homology

[Close]

BLAST of mRNA_D-dichotoma_M_contig945.20172.1 vs. uniprot
Match: D8LQL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQL1_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 2.430e-12
Identity = 40/72 (55.56%), Postives = 47/72 (65.28%), Query Frame = 0

Query:  130 VSSFPINRLEQAITHLAGAVGV-GTEPLIYVRRSDVAEVVDSLLCQARKPGGPEFNSPALERLAIVRRSAGK 200
             SS   N  E+A+T LAGA    GTEPLIYVRR+DVA +VD+L+   R P GP   SPA  RL +VRRS  K
Sbjct:   45 ASSAQGNPFEEALTRLAGAASTCGTEPLIYVRRADVAAIVDALMDVVRTPAGPTVTSPAFARLNLVRRSGRK 116

[Close]

BLAST of mRNA_D-dichotoma_M_contig945.20172.1 vs. uniprot
Match: A0A6H5KYI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYI0_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 3.010e-11
Identity = 40/72 (55.56%), Postives = 47/72 (65.28%), Query Frame = 0

Query:  130 VSSFPINRLEQAITHLAGAVGV-GTEPLIYVRRSDVAEVVDSLLCQARKPGGPEFNSPALERLAIVRRSAGK 200
             SS   N  E+A+T LAGA    GTEPLIYVRR+DVA +VD+L+   R P GP   SPA  RL +VRRS  K
Sbjct:  131 ASSARGNPFEEALTRLAGAASTCGTEPLIYVRRADVAVIVDALMDVVRTPAGPTVTSPAFARLNLVRRSGRK 202

The following BLAST results are available for this feature:

BLAST of mRNA_D-dichotoma_M_contig945.20172.1 vs. uniprot

BLAST of mRNA_D-dichotoma_M_contig945.20172.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LQL1_ECTSI	2.430e-12	55.56	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KYI0_9PHAE	3.010e-11	55.56	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 35..54
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..29
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 30..34
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 55..304
None	No IPR available	TMHMM	TMhelix		coord: 20..42

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-dichotoma_M_contig945	contig	D-dichotoma_M_contig945:120612..123250 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_D-dichotoma_M_contig945.20172.1	mRNA_D-dichotoma_M_contig945.20172.1	Dictyota dichotoma ODC1387m male	mRNA	D-dichotoma_M_contig945 120612..123474 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_D-dichotoma_M_contig945.20172.1 ID=prot_D-dichotoma_M_contig945.20172.1|Name=mRNA_D-dichotoma_M_contig945.20172.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=304bp
MASNIFGWMDSCVPRFSSFIPVILVWLAWPLLTLFVSRYSAVASALVMMV
AIPLTRMGTAGKDVLEGDERSRSNPRTLRGLLFSGARAVMAAERTHTVKT
PERLGCGGRNNSHRRTKSASNGDDRGYAGVSSFPINRLEQAITHLAGAVG
VGTEPLIYVRRSDVAEVVDSLLCQARKPGGPEFNSPALERLAIVRRSAGK
YLSGSVNEAIRCPGSSTRKGSVTRGRNLNEAFRDWEAKAKIPASDPRESP
SVKVERARGGDKVEPGGDFPAAESSRASPFRRSPNKSRGFVGNAARRGGS
GWDG