prot_D-dichotoma_M_contig94.20130.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig94.20130.1
Unique Nameprot_D-dichotoma_M_contig94.20130.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length318
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig94.20130.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 261..317
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 241..260
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..240
NoneNo IPR availableTMHMMTMhelixcoord: 241..263
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 19..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig94contigD-dichotoma_M_contig94:138552..149882 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig94.20130.1mRNA_D-dichotoma_M_contig94.20130.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig94 138401..150147 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig94.20130.1 ID=prot_D-dichotoma_M_contig94.20130.1|Name=mRNA_D-dichotoma_M_contig94.20130.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=318bp
MQSGVPTREEAKNSTSDDGTQWILGVDDSKCAVCGTTFVALDHRYMSHYR
KLLVCEACARKRKVLRAHHAPLLACDACLEKSRNKCGRAKTEAEGGTAEC
LEKSGNLYATAILARRTRIRKVGIKKVGINCSPPSPLRMSFKIQGKTHAI
TWTSSLTPSPPPWPHSSLSTMVLSTISVESKSQIKPRLGPEQGLRRAGGT
LVARSSPELEGRSGRHAMGTYETQRTRERSGGSGKKRVDRAFSLGILSFC
LMVMSAGLAWSGTMEKGGDFLFLDHPKKLGAVSHRRIFINRRYGCSHKIY
SDSHYSSVHTTTHILIV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011011Znf_FYVE_PHD