prot_D-dichotoma_M_contig92.19942.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig92.19942.1
Unique Nameprot_D-dichotoma_M_contig92.19942.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length1213
Homology
BLAST of mRNA_D-dichotoma_M_contig92.19942.1 vs. uniprot
Match: D8LID0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LID0_ECTSI)

HSP 1 Score: 464 bits (1195), Expect = 1.080e-139
Identity = 278/489 (56.85%), Postives = 337/489 (68.92%), Query Frame = 0
Query:  150 VDAPTLVPAMLAPIPPPPRKRKLRTTADIENGQGTGEEVMQEAPNKTLMEMLQSYLDSQDVHTRVLLVVVLFVLAGGVFGAYGVLLMYAIRDHKPTYIVLCVVFTLVLLWVLGKYFLNGDERLQDQSAIAQDIANLYASIPDHTALRGVSERGRAQFTSFKYEKSEVIVTAVTDDGVSLGSERGSELMMDGADPACPLCNGVYAEGAELCLLPCLHVFHKKCIHQWCDKNILCPLCKRHLEAPEPIHTL-------GRMAVTSGPQSEPARPTNGAAARNGPWRNMLGNSQPGPASGHGSDRGLGGTRSDDGKWNDRVLSAAHMQLSGRGHNRVTSFSSDTRRASTGSGR-------GRGGGNSVGRQGPPRSVSSGTGNIGSTRSASLGYGPGGVGGRAGVQRQRSS------------SFSVSSERGRGPT-RVAHGT--HPARLGPXXXXXXXXSPKSRSDLGLGSKEAELVRASSDAILSRHTAR 609
            V AP LVPA+LAP+P        R  AD+E G+    EV+++AP+KTLMEMLQ+YL  QD++TR++LVVVL VLAGGV GAY V+L  AI +    Y VL  VF++VL WVL KY  +GD++LQDQS IAQDIA LYA+IPDHTA++GVSE+GRAQFT FKYEKSE++ TAVTDDGVSLGSERGSELMMDGADP+CPLCN  Y EGAELCLLPCLHVFHK CI++WC+++I+CPLCKRHLEA EP+HTL       G  AV    QSEP     G   +   WR +LGN+ PGPAS HGS+RGLGGTRS+DG WNDRVL+AA  Q  G  HNRVTSFSS+TRR++   GR       GRGGG       PP S S+G G +G  R       P  V G AG Q+                + +   +RGRG + RVAHGT  H +  G         SP+SRSDLG+GS++AE +RA+SDA+LSRH +R
Sbjct:  177 VPAP-LVPALLAPVPX--XXXXXRAAADVEAGEAG--EVLEDAPDKTLMEMLQTYLKKQDLYTRIVLVVVLLVLAGGVLGAYVVMLWSAISEESVKYTVLVSVFSVVLFWVLWKYCFSGDQKLQDQSQIAQDIATLYAAIPDHTAVKGVSEKGRAQFTDFKYEKSEMMFTAVTDDGVSLGSERGSELMMDGADPSCPLCNKAYVEGAELCLLPCLHVFHKTCINKWCNRHIVCPLCKRHLEAAEPLHTLTASYNHPGGNAV----QSEPGHRGYGNGHQRHQWRGVLGNTAPGPASAHGSERGLGGTRSEDGMWNDRVLNAAQQQQMGGKHNRVTSFSSETRRSNNARGRPGERVGSGRGGG-------PPHSSSAGAG-MGPQR-------PQSVSGSAGWQQXXXXXXXXXXXXXXXXTTATEQQRGRGGSGRVAHGTARHRSSAGSLARGDLSTSPRSRSDLGVGSRDAENMRANSDAMLSRHASR 641          
BLAST of mRNA_D-dichotoma_M_contig92.19942.1 vs. uniprot
Match: A0A6H5JTX8_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX8_9PHAE)

HSP 1 Score: 461 bits (1185), Expect = 5.720e-138
Identity = 278/492 (56.50%), Postives = 328/492 (66.67%), Query Frame = 0
Query:  150 VDAPTLVPAMLAPIPPPPRKRKLRTTADIENGQGTGEEVMQEAPNKTLMEMLQSYLDSQDVHTRVLLVVVLFVLAGGVFGAYGVLLMYAIRDHKPTYIVLCVVFTLVLLWVLGKYFLNGDERLQDQSAIAQDIANLYASIPDHTALRGVSERGRAQFTSFKYEKSEVIVTAVTDDGVSLGSERGSELMMDGADPACPLCNGVYAEGAELCLLPCLHVFHKKCIHQWCDKNILCPLCKRHLEAPEPIHTLGRMAVTSGP---QSEPARPTNGAAARNGPWRNMLGNSQPGPASGHGSDRGLGGTRSDDGKWNDRVLSAAHMQLSGRGHNRVTSFSSDTRRASTGSGR-------GRGGGNSVGRQGPPRSVSSGTGNIGSTRSASLGYGPGGVGGRAGVQRQRSSSFS-------------------VSSERGRGPT-RVAHGT--HPARLGPXXXXXXXXSPKSRSDLGLGSKEAELVRASSDAILSRHTAR 609
            V AP LVPA+LAP+P     R  R  ADIE G+    EV+++AP+KTLMEMLQ+YL  QD++TR++LVVVL VLAGG  GAY V+L YAI +    Y VL  VF++VLLWVL KY  +GD++LQDQS IAQDIA LYA+IPDHTA++GVSE+GRAQFT FKYEKSE++ TAVTDDGVSLGSERGSELMMDGADP+CPLCN VY EGAELCLLPCLHVFHK CI++WC+++I+CPLCKRHLEA EP+HTL       G    QSEP     G   +   WR MLGN+ PGPAS HGS+RGLGGTRS+DG WNDRVL+AA  Q  G  HNRVTSFSS+TRR++   GR       GRGGG       PP S S                 P  V G  G Q+                             +RGRG + RVAHGT  H +  G         SP+SRSDLG+GS+EAE +RA+SDAILSRH  R
Sbjct:  175 VPAP-LVPALLAPVPXXXXXR--RAAADIEAGEAG--EVLEDAPDKTLMEMLQTYLKKQDLYTRMVLVVVLLVLAGGALGAYVVMLWYAISEKNVKYTVLVSVFSVVLLWVLWKYCFSGDQKLQDQSQIAQDIATLYAAIPDHTAVKGVSEKGRAQFTDFKYEKSEMMFTAVTDDGVSLGSERGSELMMDGADPSCPLCNKVYVEGAELCLLPCLHVFHKTCINKWCNRHIVCPLCKRHLEAAEPLHTLTASYNHPGDNTVQSEPGHRGYGNGQQRHQWRGMLGNAAPGPASAHGSERGLGGTRSEDGMWNDRVLNAAQRQQMGGKHNRVTSFSSETRRSNNARGRPGERAGSGRGGG-------PPHSSS--------XXXXXXXXRPHSVSGSTGRQQXXXXXXXXXXXXXXXXXXXXXXXXXXTEQQRGRGGSGRVAHGTARHRSSAGSLARGDLSTSPRSRSDLGVGSREAENMRANSDAILSRHAGR 646          
BLAST of mRNA_D-dichotoma_M_contig92.19942.1 vs. uniprot
Match: A0A4D9A5U3_SALSN (RING-type domain-containing protein n=1 Tax=Salvia splendens TaxID=180675 RepID=A0A4D9A5U3_SALSN)

HSP 1 Score: 69.3 bits (168), Expect = 3.260e-9
Identity = 35/75 (46.67%), Postives = 45/75 (60.00%), Query Frame = 0
Query:  312 EKSEVIVTAVTDDGVSLGSERGSELMMDGADPACPLCNGVYAEGAELCLLPCLHVFHKKCIHQWCDKNILCPLCK 386
            +K EV +TA+  D  S+     +EL++   D  C +C   YA+GAELC LPC H FH KCI +W   N  CPLCK
Sbjct:  154 KKQEVDLTALEGDSFSM-----AELVLHPEDSECCICLLKYADGAELCTLPCNHHFHHKCITKWLRINATCPLCK 223          
BLAST of mRNA_D-dichotoma_M_contig92.19942.1 vs. uniprot
Match: UPI001C273A51 (E3 ubiquitin-protein ligase At4g11680-like n=2 Tax=Salvia TaxID=21880 RepID=UPI001C273A51)

HSP 1 Score: 69.7 bits (169), Expect = 9.360e-9
Identity = 41/101 (40.59%), Postives = 57/101 (56.44%), Query Frame = 0
Query:  287 ASIPDHTALRGVSERGRAQFTSFKYEKS-EVIVTAVTDDGVSLGSERGSELMMDGADPACPLCNGVYAEGAELCLLPCLHVFHKKCIHQWCDKNILCPLCK 386
            AS  D  +L   + R +    +F+ +K  EV +TA+  D +S+     +EL++   D  C +C   YA+GAELC LPC H FH KCI +W   N  CPLCK
Sbjct:  236 ASENDIRSLPKYTYRPQDTVGAFQNKKEREVDLTALEGDSISM-----AELVLHPEDSECCICLLKYADGAELCTLPCNHHFHHKCITKWLRINATCPLCK 331          
BLAST of mRNA_D-dichotoma_M_contig92.19942.1 vs. uniprot
Match: A0A7J9MXW5_GOSSC (RING-type domain-containing protein n=34 Tax=Gossypium TaxID=3633 RepID=A0A7J9MXW5_GOSSC)

HSP 1 Score: 64.7 bits (156), Expect = 5.850e-7
Identity = 33/94 (35.11%), Postives = 49/94 (52.13%), Query Frame = 0
Query:  296 RGVSERGRAQFTSFKYEKSEVIVTAVTDDGVSLG---SERGSELMMDGADPACPLCNGVYAEGAELCLLPCLHVFHKKCIHQWCDKNILCPLCK 386
            RG +    +   +++++  ++    V D  VS G   S    E ++ G D  C +C   YA+  EL  LPC+HVFH KC+ +W   N  CPLCK
Sbjct:  303 RGATMESISALPTYRFKSKKI--GNVDDPDVSCGVLASGTAKERVISGEDAVCCICLAAYADNDELRELPCIHVFHVKCVDKWLRINACCPLCK 394          
BLAST of mRNA_D-dichotoma_M_contig92.19942.1 vs. uniprot
Match: A0A1S3CPJ9_CUCME (E3 ubiquitin protein ligase RIE1-like n=1 Tax=Cucumis melo TaxID=3656 RepID=A0A1S3CPJ9_CUCME)

HSP 1 Score: 59.7 bits (143), Expect = 8.760e-7
Identity = 32/99 (32.32%), Postives = 47/99 (47.47%), Query Frame = 0
Query:  295 LRGVSERGRAQFTSFKYEKSEVIVTAVTDDGVSLGS--ERG-----SELMMDGADPACPLCNGVYAEGAELCLLPCLHVFHKKCIHQWCDKNILCPLCK 386
            L G SE        +++ +   + +   D    +G   E G     +E  ++  D AC +C   Y  G +LC+LPC H FH +CI +W   N  CPLCK
Sbjct:   25 LEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCK 123          
BLAST of mRNA_D-dichotoma_M_contig92.19942.1 vs. uniprot
Match: A0A6J1DJQ2_MOMCH (E3 ubiquitin-protein ligase At4g11680-like n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1DJQ2_MOMCH)

HSP 1 Score: 62.4 bits (150), Expect = 2.290e-6
Identity = 31/101 (30.69%), Postives = 47/101 (46.53%), Query Frame = 0
Query:  293 TALRGVSERGRAQFTSFKYEKSEVIVTAVTDDGVSLG-------SERGSELMMDGADPACPLCNGVYAEGAELCLLPCLHVFHKKCIHQWCDKNILCPLCK 386
            T L G SE        +++ +   +    +D    +G       ++  +E  +   D AC +C   Y  G +LC+LPC H FH +CI +W   N  CPLCK
Sbjct:  237 TFLEGASEDEIRALPKYRFHQDNPLEPFDSDKNQEIGMTLEPGFNDHTTEHTLHPEDSACCICLAQYVHGVQLCMLPCTHHFHTRCIVKWLRINATCPLCK 337          
BLAST of mRNA_D-dichotoma_M_contig92.19942.1 vs. uniprot
Match: A0A6J1HW81_CUCMA (E3 ubiquitin-protein ligase At1g63170-like n=3 Tax=Cucurbita TaxID=3660 RepID=A0A6J1HW81_CUCMA)

HSP 1 Score: 61.6 bits (148), Expect = 4.060e-6
Identity = 33/101 (32.67%), Postives = 50/101 (49.50%), Query Frame = 0
Query:  293 TALRGVSERGRAQFTSFKYEKSEVIVTAVTDDGVSLGS--ERG-----SELMMDGADPACPLCNGVYAEGAELCLLPCLHVFHKKCIHQWCDKNILCPLCK 386
            T L G SE        +++ +   + +  +D    +G   E G     +E +++  D AC +C   Y  G +LC+LPC H FH +CI +W   N  CPLCK
Sbjct:  237 TFLEGASEDEIRALPKYRFRQDNPLESFDSDKKHEVGMTLEPGYNGYTTEHLLNPEDSACCICLAQYVHGVQLCMLPCSHHFHTRCIVKWLRINATCPLCK 337          
BLAST of mRNA_D-dichotoma_M_contig92.19942.1 vs. uniprot
Match: A0A0A0KYD1_CUCSA (RING-type domain-containing protein n=4 Tax=Benincaseae TaxID=1003877 RepID=A0A0A0KYD1_CUCSA)

HSP 1 Score: 59.7 bits (143), Expect = 1.680e-5
Identity = 32/99 (32.32%), Postives = 47/99 (47.47%), Query Frame = 0
Query:  295 LRGVSERGRAQFTSFKYEKSEVIVTAVTDDGVSLGS--ERG-----SELMMDGADPACPLCNGVYAEGAELCLLPCLHVFHKKCIHQWCDKNILCPLCK 386
            L G SE        +++ +   + +   D    +G   E G     +E  ++  D AC +C   Y  G +LC+LPC H FH +CI +W   N  CPLCK
Sbjct:  239 LEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCK 337          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig92.19942.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LID0_ECTSI1.080e-13956.85RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JTX8_9PHAE5.720e-13856.50RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A4D9A5U3_SALSN3.260e-946.67RING-type domain-containing protein n=1 Tax=Salvia... [more]
UPI001C273A519.360e-940.59E3 ubiquitin-protein ligase At4g11680-like n=2 Tax... [more]
A0A7J9MXW5_GOSSC5.850e-735.11RING-type domain-containing protein n=34 Tax=Gossy... [more]
A0A1S3CPJ9_CUCME8.760e-732.32E3 ubiquitin protein ligase RIE1-like n=1 Tax=Cucu... [more]
A0A6J1DJQ2_MOMCH2.290e-630.69E3 ubiquitin-protein ligase At4g11680-like n=1 Tax... [more]
A0A6J1HW81_CUCMA4.060e-632.67E3 ubiquitin-protein ligase At1g63170-like n=3 Tax... [more]
A0A0A0KYD1_CUCSA1.680e-532.32RING-type domain-containing protein n=4 Tax=Beninc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 345..385
e-value: 1.2E-4
score: 31.4
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 344..386
e-value: 6.5E-8
score: 32.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 345..386
score: 12.061
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 311..392
e-value: 4.5E-13
score: 50.7
NoneNo IPR availablePANTHERPTHR45977FAMILY NOT NAMEDcoord: 230..389
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 240..245
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..213
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 267..1212
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 246..266
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 214..239
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 341..398
NoneNo IPR availableTMHMMTMhelixcoord: 245..262
NoneNo IPR availableTMHMMTMhelixcoord: 216..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig92contigD-dichotoma_M_contig92:596734..612834 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig92.19942.1mRNA_D-dichotoma_M_contig92.19942.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig92 593494..613145 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig92.19942.1 ID=prot_D-dichotoma_M_contig92.19942.1|Name=mRNA_D-dichotoma_M_contig92.19942.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=1213bp
MSGTHARSKSGSRLKSLSDNEARRESLEVKAGVNPLYGSEISAGSGVLDL
DASGAEDEGTPSVRRETAHGERVALRGGSVGARGSSPLSSMTTSTVHITT
SSRPGRQSGAGAVAIATRPTGGSGSTSSVTSRSGEKDEISLSMRSEPSQV
DAPTLVPAMLAPIPPPPRKRKLRTTADIENGQGTGEEVMQEAPNKTLMEM
LQSYLDSQDVHTRVLLVVVLFVLAGGVFGAYGVLLMYAIRDHKPTYIVLC
VVFTLVLLWVLGKYFLNGDERLQDQSAIAQDIANLYASIPDHTALRGVSE
RGRAQFTSFKYEKSEVIVTAVTDDGVSLGSERGSELMMDGADPACPLCNG
VYAEGAELCLLPCLHVFHKKCIHQWCDKNILCPLCKRHLEAPEPIHTLGR
MAVTSGPQSEPARPTNGAAARNGPWRNMLGNSQPGPASGHGSDRGLGGTR
SDDGKWNDRVLSAAHMQLSGRGHNRVTSFSSDTRRASTGSGRGRGGGNSV
GRQGPPRSVSSGTGNIGSTRSASLGYGPGGVGGRAGVQRQRSSSFSVSSE
RGRGPTRVAHGTHPARLGPGPRPGDGGSPKSRSDLGLGSKEAELVRASSD
AILSRHTARHASHGVKGHSRVSAEDGGEKHAGQGSATRSRGQGGSGRMAG
RGNSRNSHVGSALRSSSAPPGSVASESETEHSRPRRKSSIESDVPHELPR
SLHPQGQGPAVITVRKVKTAKVGAPGRGRRQGSVGSSRGGSDNEHTAAKV
FMKMDDEDDVQSSPEAKKLSYGPRKPRVNPRGGASHRRSASTGSATEGES
ASTGRKPRRRASTSQRPNTGNATAAAENGQSKRNSDRGLRTGVRNSDASG
NSSCGESSSDTRVRVARRRSAKAASSGGRSTTASSATPPKAAPVTKGTPA
PPMAAARAASWNSAVAPPPTIDTSPSGETEYSSVLKERNSESTEIAHLGS
SGGRDASLTLPLGAGSMDFFGIESVANAVTSDGESLGSVARKSLTSKVFG
STNSTRAGHGRIFGGGTARIGKARGAVTDSEDEGATEISVDSMPRAHMRS
VQELIQTYEKTRYNSDERSNSDEHGASCGASCTSDGGSRRNSRVQRRSSR
SGSTGNLLELLRAYEQEEAPASRPKLTYVSRGRHIRGHTPPEVSVDHSAT
EEELPTVNPDGQEWGDEEPYYRPKLTYGSGLAPKPKRAGPPMSEFASIGS
RSAKVASVGSST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD