prot_D-dichotoma_M_contig917.19912.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig917.19912.1
Unique Nameprot_D-dichotoma_M_contig917.19912.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length197
Homology
BLAST of mRNA_D-dichotoma_M_contig917.19912.1 vs. uniprot
Match: A0A1G5XJM3_9EURY (Polymorphic outer membrane protein repeat-containing protein (Fragment) n=1 Tax=Methanobrevibacter millerae TaxID=230361 RepID=A0A1G5XJM3_9EURY)

HSP 1 Score: 55.8 bits (133), Expect = 1.200e-5
Identity = 60/193 (31.09%), Postives = 87/193 (45.08%), Query Frame = 0
Query:    8 FSLLNLTGESYFVNNAAEVSGGSIH--GADSIMNVSGHEEYAYFAGNVAGTDFGGAIYWRGNDASISIEAPSYFFNNSSPTAGAVYLSGRGLDAFLFEAVFESNVARKN--------GGAL--------VVHS--------------IGLASSFSVVEGCVFYGNKAKFNGGAILASSGYVSLEYLSLHHNIA 168
            +S   L   S F NN A   GG+I+   A   +N++     + F  N+A T  GGAI     DAS      S F+NN +   GA+Y+ G G D +++ +VFE N A  +        GGA+        +V +               G  S  S ++ C+F GN AK+NGGAI  ++  + L       NIA
Sbjct: 3313 YSEKGLVYNSEFTNNRA-YDGGAIYVGSASGEINIT----KSTFRDNIALTT-GGAI---SIDASAVTVNASNFYNNDATKGGALYVGGVGTDNYIYGSVFEGNNAISSSETAMDGLGGAIDWVASSGTIVDTRFTDNHADYGGGVYFGERSIDSKIDNCLFEGNDAKYNGGAIDCNASTMYLTNTVFDGNIA 3496          
BLAST of mRNA_D-dichotoma_M_contig917.19912.1 vs. uniprot
Match: A0A0U3EAN5_9EURY (Adhesin-like protein n=2 Tax=Methanobrevibacter millerae TaxID=230361 RepID=A0A0U3EAN5_9EURY)

HSP 1 Score: 54.3 bits (129), Expect = 4.020e-5
Identity = 58/193 (30.05%), Postives = 91/193 (47.15%), Query Frame = 0
Query:    8 FSLLNLTGESYFVNNAAEVSGGSIH--GADSIMNVSGHEEYAYFAGNVAGTDFGGAIYWRGNDASISIEAPSYFFNNSSPTAGAVYLSGRGLDAFLFEAVFESNVARKN--------GGAL--------VVHS--------------IGLASSFSVVEGCVFYGNKAKFNGGAILASSGYVSLEYLSLHHNIA 168
            +S   L   S F NN A   GG+I+   A   +N++     + F  N+A T  GGAI    N +++++ A S F+NN++   GA+++ G G D +++ +VFE N A           GGA+        +V +               G  S  S +E C+F GN AK+NGGAI  ++  + L       N+A
Sbjct: 2924 YSEKGLVYNSEFTNNRA-YDGGAIYVGSASGEINIT----KSTFHDNIAVTT-GGAISI--NASAVTVNA-SNFYNNNATRGGALFVGGVGTDNYIYGSVFEGNNAISTTETAMNGLGGAIYWVASSGTIVDTRFTDNHADYGGGVYFGENSINSRIENCLFEGNDAKYNGGAIDCNASSMYLTNTVFDGNVA 3107          
BLAST of mRNA_D-dichotoma_M_contig917.19912.1 vs. uniprot
Match: A0A843EXX2_9EURY (Ig-like domain repeat protein (Fragment) n=1 Tax=Methanobrevibacter sp. TaxID=66852 RepID=A0A843EXX2_9EURY)

HSP 1 Score: 53.5 bits (127), Expect = 7.060e-5
Identity = 57/195 (29.23%), Postives = 84/195 (43.08%), Query Frame = 0
Query:    8 FSLLNLTGESYFVNNAAEVSG----GSIHGADSIMNVSGHEEYAYFAGNVAGTDFGGAIYWRGNDASISIEAPSYFFNNSSPTAGAVYLSGRGLDAFLFEAVFESNVARKN--------GGAL--VVHS--------------------IGLASSFSVVEGCVFYGNKAKFNGGAILASSGYVSLEYLSLHHNIA 168
            +S   L   S F NN A   G    GS  G  +I   + H+  A   G        GAI    N +++++ A S F+NN++   GA+++ G G D +++ +VFE N A           GGA+  V  S                     G  S  S +E C+F GN AK+NGGAI  ++  + L       N+A
Sbjct:  677 YSEKGLVYNSEFTNNRAYDGGAIYVGSASGEINITKSTFHDNIAVITG--------GAISI--NASAVTVNA-SNFYNNNATRGGALFVGGVGTDNYIYGSVFEGNNAISTTETAMNGLGGAIDWVASSGTIIDTRFTDNHADYGGGVYFGENSINSRIENCLFEGNDAKYNGGAIDCNASSMYLTNTVFDGNVA 860          
BLAST of mRNA_D-dichotoma_M_contig917.19912.1 vs. uniprot
Match: A0A843DAX5_9EURY (Ig-like domain repeat protein (Fragment) n=1 Tax=Methanobrevibacter sp. TaxID=66852 RepID=A0A843DAX5_9EURY)

HSP 1 Score: 53.5 bits (127), Expect = 7.240e-5
Identity = 57/195 (29.23%), Postives = 84/195 (43.08%), Query Frame = 0
Query:    8 FSLLNLTGESYFVNNAAEVSG----GSIHGADSIMNVSGHEEYAYFAGNVAGTDFGGAIYWRGNDASISIEAPSYFFNNSSPTAGAVYLSGRGLDAFLFEAVFESNVARKN--------GGAL--VVHS--------------------IGLASSFSVVEGCVFYGNKAKFNGGAILASSGYVSLEYLSLHHNIA 168
            +S   L   S F NN A   G    GS  G  +I   + H+  A   G        GAI    N +++++ A S F+NN++   GA+++ G G D +++ +VFE N A           GGA+  V  S                     G  S  S +E C+F GN AK+NGGAI  ++  + L       N+A
Sbjct: 2096 YSEKGLVYNSEFTNNRAYDGGAIYVGSASGEINITKSTFHDNIAVITG--------GAISI--NASAVTVNA-SNFYNNNATRGGALFVGGVGTDNYIYGSVFEGNNAISTTETAMNGLGGAIDWVASSGTIIDTRFTDNHADNGGGVYFGENSINSRIENCLFEGNDAKYNGGAIDCNASSMYLTNTVFDGNVA 2279          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig917.19912.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A1G5XJM3_9EURY1.200e-531.09Polymorphic outer membrane protein repeat-containi... [more]
A0A0U3EAN5_9EURY4.020e-530.05Adhesin-like protein n=2 Tax=Methanobrevibacter mi... [more]
A0A843EXX2_9EURY7.060e-529.23Ig-like domain repeat protein (Fragment) n=1 Tax=M... [more]
A0A843DAX5_9EURY7.240e-529.23Ig-like domain repeat protein (Fragment) n=1 Tax=M... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 46..187

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig917contigD-dichotoma_M_contig917:251578..262753 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig917.19912.1mRNA_D-dichotoma_M_contig917.19912.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig917 251578..262753 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig917.19912.1 ID=prot_D-dichotoma_M_contig917.19912.1|Name=mRNA_D-dichotoma_M_contig917.19912.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=197bp
GAALALEFSLLNLTGESYFVNNAAEVSGGSIHGADSIMNVSGHEEYAYFA
GNVAGTDFGGAIYWRGNDASISIEAPSYFFNNSSPTAGAVYLSGRGLDAF
LFEAVFESNVARKNGGALVVHSIGLASSFSVVEGCVFYGNKAKFNGGAIL
ASSGYVSLEYLSLHHNIADDSGGAIFSDGGYTVSAINVVGTEMSYNQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence