prot_D-dichotoma_M_contig1100.887.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dichotoma_M_contig1100.887.1
Unique Nameprot_D-dichotoma_M_contig1100.887.1
Typepolypeptide
OrganismDictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length182
Homology
BLAST of mRNA_D-dichotoma_M_contig1100.887.1 vs. uniprot
Match: A0A6H5L028_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L028_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 3.270e-22
Identity = 57/153 (37.25%), Postives = 91/153 (59.48%), Query Frame = 0
Query:   25 TRPQQGMFNAIAFFKSTVAQVLHGSYPQRCMVWVGEVIIWGNTQAEMVESLGQVLKKLQ-RGLHPAAHKREFFAPAMKWYERIFSGKGVTNDLECVQVMMAMRHLETVGALMQCLLAANWMRPHLLRLVEVKAPLQTLMDDRLAGT-RRTKNV 175
            TR  Q + NA  +F++ + ++L G     C VWV + I WG  + +++ +L ++L +LQ  G+  AAHK  FF   ++W  +++SG  V +D E +Q +  MR  ET G LMQ L A  W+R  L RL EV  P++TL++  +A   R+TK++
Sbjct:  533 TRVPQDVLNATGYFQAVMTEILQGL---NCAVWVDDDIWWGIDETDLLNTLDEILWRLQDNGIFAAAHKCPFFDTKIRWCGKVYSGGQVASDPERLQGLTDMRRPETAGKLMQFLQAVKWLRTSLSRLAEVMEPVRTLLEVNMASAPRQTKSI 682          
BLAST of mRNA_D-dichotoma_M_contig1100.887.1 vs. uniprot
Match: A0A225UZ40_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UZ40_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 5.120e-17
Identity = 54/155 (34.84%), Postives = 80/155 (51.61%), Query Frame = 0
Query:   25 TRPQQGMFNAIAFFKSTVAQVLHGSYPQRCMVWVGEVIIWGNTQAEMVESLGQVLKKLQR-GLHPAAHKREFFAPAMKWYERIFSGKGVTNDLECVQVMMAMRHLETVGALMQCLLAANWMRPHLLRLVEVKAPLQTLMDDRLAGTRRTKNVPRG 178
            TR  QG  +A   F+STV  VL     +  +VW+ +++I+ +TQ E+V+++  VL KL   G      K   F   ++W  RI +  G+ +D E ++ +  M    T   L Q L A+NWMR  L+    V  PLQ  +D  L GTR+TK    G
Sbjct:   51 TRVPQGSTDAALPFQSTVEMVLGDLVNRNVIVWIDDLLIFADTQEELVDAIDAVLTKLDEFGFVVNPKKSSLFLSEVRWCGRIINKHGIGHDPERIRALREMAIPTTAAELQQFLCASNWMRNGLVDYARVARPLQERLDVALTGTRKTKRAAAG 205          
BLAST of mRNA_D-dichotoma_M_contig1100.887.1 vs. uniprot
Match: A0A2P4YJ51_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YJ51_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 3.290e-16
Identity = 52/155 (33.55%), Postives = 80/155 (51.61%), Query Frame = 0
Query:   25 TRPQQGMFNAIAFFKSTVAQVLHGSYPQRCMVWVGEVIIWGNTQAEMVESLGQVLKKLQR-GLHPAAHKREFFAPAMKWYERIFSGKGVTNDLECVQVMMAMRHLETVGALMQCLLAANWMRPHLLRLVEVKAPLQTLMDDRLAGTRRTKNVPRG 178
            TR  QG  +A   F+STV  VL     +  +VW+ +++++  TQ+E+++++  VL+KL   G      K   F   ++W  RI +  G+  D E +Q +  +    T   L Q L A+NWMR  L+    V  PLQ  +D  L GT+RTK    G
Sbjct:  315 TRVPQGSTDADLHFQSTVQMVLRELVGKCVIVWIDDLLVFAETQSELLDAIDAVLQKLDEYGFILNPKKCSLFRTEIQWCGRIINKNGIGYDPERIQALRNIPPPMTAAELQQLLCASNWMRSGLVDYARVVRPLQERLDQALTGTKRTKRAAAG 469          
BLAST of mRNA_D-dichotoma_M_contig1100.887.1 vs. uniprot
Match: A0A2P4YLW7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YLW7_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 4.310e-14
Identity = 51/156 (32.69%), Postives = 79/156 (50.64%), Query Frame = 0
Query:   25 TRPQQGMFNAIAFFKSTVAQVLHGSYPQRCM-VWVGEVIIWGNTQAEMVESLGQVLKKLQR-GLHPAAHKREFFAPAMKWYERIFSGKGVTNDLECVQVMMAMRHLETVGALMQCLLAANWMRPHLLRLVEVKAPLQTLMDDRLAGTRRTKNVPRG 178
            TR  QG  +A   F+S V  VL G    +C+ VW+ +++++  TQ+E+++ +  VL+K    G      K   F   ++W  RI +  G+  D E ++ +  +    T   L Q L A+NWMR  L+    V  PLQ  +D  L GT+RTK    G
Sbjct:  118 TRVPQGSTDAALHFQSMVQMVL-GELVGKCVIVWIDDLLVFAETQSELLDVIDAVLQKFDEYGFILNPKKCSLFQTEIQWCGRIINKNGIGYDPERIEALRNIPPPMTAAELQQLLCASNWMRSGLVDYARVVRPLQERLDQALTGTKRTKRAAAG 272          
BLAST of mRNA_D-dichotoma_M_contig1100.887.1 vs. uniprot
Match: A0A225UHX1_9STRA (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UHX1_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.580e-8
Identity = 41/125 (32.80%), Postives = 63/125 (50.40%), Query Frame = 0
Query:   55 MVWVGEVIIWGNTQAEMVESLGQVLKKLQR-GLHPAAHKREFFAPAMKWYERIFSGKGVTNDLECVQVMMAMRHLETVGALMQCLLAANWMRPHLLRLVEVKAPLQTLMDDRLAGTRRTKNVPRG 178
            +VW+ +++I+ +TQ E+V+++  VL KL   G      K   F   + WY RI + +G+ +D E ++ +  M    T   L Q L A+NWMR  L   V+      T     L GTR+TK    G
Sbjct:    6 IVWIDDLLIFADTQEELVDAIDAVLTKLDEFGFIVNPKKSSLFLSEVWWYGRIINKQGIGHDPERIRALRWMAIPTTAAELQQFLCASNWMRNEL---VDSCRSSITRAAGPLTGTRKTKRAAAG 127          
BLAST of mRNA_D-dichotoma_M_contig1100.887.1 vs. uniprot
Match: A0A2P4Y427_9STRA (Reverse transcriptase domain-containing protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y427_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 4.590e-7
Identity = 39/112 (34.82%), Postives = 59/112 (52.68%), Query Frame = 0
Query:   25 TRPQQGMFNAIAFFKSTVAQVLHGSYPQRCM-VWVGEVIIWGNTQAEMVESLGQVLKKL-QRGLHPAAHKREFFAPAMKWYERIFSGKGVTNDLECVQVMMAMRHLETVGAL 134
            TR  QG  +A   F+STV  VL G    +C+ VW+ +++++ NTQ E+V ++  VL KL + GL     K   F   ++W  RI +  GV +D E +Q +  M    T   L
Sbjct:  484 TRVPQGSTDAALHFQSTVEMVL-GDLVNKCVIVWIDDLLVFANTQEELVGAIDVVLTKLDEHGLILNPKKSTVFLKEVRWCGRIINQHGVGHDPERIQALREMPSPTTAAEL 594          
BLAST of mRNA_D-dichotoma_M_contig1100.887.1 vs. uniprot
Match: A0A6A3X8Z5_9STRA (Reverse transcriptase domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3X8Z5_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 2.160e-5
Identity = 31/99 (31.31%), Postives = 56/99 (56.57%), Query Frame = 0
Query:   25 TRPQQGMFNAIAFFKSTVAQVLHGSYPQRCM-VWVGEVIIWGNTQAEMVESLGQVLKKL-QRGLHPAAHKREFFAPAMKWYERIFSGKGVTNDLECVQV 121
            TR  QG  +A   F+ TV  VL G    +C+ VW+ +++++ +T+ E+V+++  VL KL + GL     K   F   ++W  RI +  G+ +D E +++
Sbjct:   37 TRVPQGSTDAALHFQFTVEMVL-GELVNKCVIVWIDDLLVFADTEEELVDAIEAVLTKLGEYGLKLNPKKSALFLTEVRWCGRIINKDGIGHDPERIRL 134          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dichotoma_M_contig1100.887.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5L028_9PHAE3.270e-2237.25CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A225UZ40_9STRA5.120e-1734.84Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A2P4YJ51_9STRA3.290e-1633.55Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A2P4YLW7_9STRA4.310e-1432.69Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
A0A225UHX1_9STRA1.580e-832.80Reverse transcriptase domain-containing protein (F... [more]
A0A2P4Y427_9STRA4.590e-734.82Reverse transcriptase domain-containing protein n=... [more]
A0A6A3X8Z5_9STRA2.160e-531.31Reverse transcriptase domain-containing protein n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.270coord: 27..101
e-value: 4.8E-6
score: 27.9
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 29..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dichotoma_M_contig1100contigD-dichotoma_M_contig1100:34420..34965 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dichotoma_M_contig1100.887.1mRNA_D-dichotoma_M_contig1100.887.1Dictyota dichotoma ODC1387m malemRNAD-dichotoma_M_contig1100 33924..37013 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dichotoma_M_contig1100.887.1 ID=prot_D-dichotoma_M_contig1100.887.1|Name=mRNA_D-dichotoma_M_contig1100.887.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=182bp
METGRCRWLKIPRISLRLFYLPNSTRPQQGMFNAIAFFKSTVAQVLHGSY
PQRCMVWVGEVIIWGNTQAEMVESLGQVLKKLQRGLHPAAHKREFFAPAM
KWYERIFSGKGVTNDLECVQVMMAMRHLETVGALMQCLLAANWMRPHLLR
LVEVKAPLQTLMDDRLAGTRRTKNVPRGDCR*
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