prot_D-dichotoma_M_contig1002.115.1 (polypeptide) Dictyota dichotoma ODC1387m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_D-dichotoma_M_contig1002.115.1
Unique Name	prot_D-dichotoma_M_contig1002.115.1
Type	polypeptide
Organism	Dictyota dichotoma ODC1387m male (Dictyota dichotoma ODC1387m male)
Sequence length	679

Homology

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BLAST of mRNA_D-dichotoma_M_contig1002.115.1 vs. uniprot
Match: D7G859_ECTSI (Methyltransf_11 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G859_ECTSI)

HSP 1 Score: 288 bits (736), Expect = 8.050e-81
Identity = 219/688 (31.83%), Postives = 319/688 (46.37%), Query Frame = 0

Query:   58 VKLPWGADDLHCSHDEEYLNVELKVEAELKATDFLVEIGATRVKICFRPKRGA--LQTVLDEELEHRIDVSESTWSIQDRRVLVLSLCKRAGDVWRQCFRSQEQGAMKVSG-----------EKGVVGDAVFPTHRATPALASLGTQCP-------PARQSSDDSVGVALA--SFVPPDHLLIEQQSGVGIFQVYMSKPLGWQVTQARVIRSSTGECDVRYACRSKLSAIEVNRGDRQPELAFGTCLRLGRDDFQTDAASWKSGSSSGLVAFRIPFGPTC---GKIHDSLDGSANDVDGDFDVRRVARLRCRQCSNILTPPGRGLTMRALPSGRWDDCIEDMICFEGPSAVPMLAREVAFARSGLCLLGSAEVLIHPDDLIVDEVVLEE--DGEPSECPRCFSLG-RPVRCRRCGSPLGRLAPLVPGQQQAINGGPSIESRGVLLLKHTLLGDN---------------------------VTDMDSHGAGDGACRSDGGLLRSAGPAI--------DPVFASVTSVQWLMEEIEHELLVNRHRRFTLVIGGCLVSPSAACLGLIVMATHTRVSEDTRKEPRRAFRVAFREKLWGEDAEADLFVEDARPPGLQQGRDQGEKSEPGGAGLMENDKKKPK----LLILAKSDYDEVRRKLVGASWTSIDGSAESAGNRFSSRGFLFSYMF 678
            + LPWG+ +   S D      ELK++ ++  +   V + ATRVK C+RP  G    + +LD E    +   ESTW I+D+RVLVLSLCKR  D W++ F+  E      +            E   VGDA  P  + +PA A LG   P       P +      V +  +  +F  P+  L+E   G+   Q+Y+SKP G++VT+ +V R     C+VR+ CR          G   P+  F     +GR+DF+ D AS  + ++  +    +P+  T    G + +  +    D +G   ++RV+ LRCR C + +TP GR L +RA+PSGRWD+CIEDMIC++GP AVPMLAR+V FAR G CL+  AEVL+HP D+I   + + +   G  S  P    L  R V C RC  PLGR A    G   +     S ES G+LLLKH LLGD+                                          ++GGL R    A           VF + T+++WL  E+ H    +   RF +   G   +     L L+++  ++ VS D   +P RA RVAFRE+   E   AD                              +DK   K    LL ++  +Y  VR++L+  +W      A +   +  SRG+ +SY+F
Sbjct:  468 LALPWGSRESF-SEDSASATYELKLDKDVSPSTLPVSMDATRVKACYRPPPGGGDPEVLLDREFHGHV-TGESTWCIEDKRVLVLSLCKRTQDFWKRPFKKDESEPQAAATRSLADDTSKTREPPAVGDA--PGLKKSPAAAGLGPSKPVPTPPTVPRKHVRSPKVDLVASYHNFKAPERFLLEDHIGIKKLQLYLSKPPGFEVTKFQVSRVGAELCEVRFVCRDAA-------GRDLPDAQFLQRADVGREDFEGDRASCSAEATDSMCVVGVPYSGTASGRGGVEEEAESDGLDDEG---LQRVSCLRCRFCKHPITPAGRVLAVRAMPSGRWDECIEDMICYDGPQAVPMLARDVNFARPGRCLMAQAEVLLHPRDVITGALTVADARGGAVSMMPEEDDLEWRGVDCARCDLPLGRPATSPIGHDNS-----SQESVGLLLLKHCLLGDDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATEGGLARGPPEATAGSPEKKSPRVFENRTAIKWLQREMAHYNERDGCARFIVSAKGRSPATPGGSLSLLLVKMNSLVSVDGSSKPGRAHRVAFREESLEEAERADEXXXXXXXXXXXXXXXXX-------XXXXXSDKTAAKVPARLLEVSYGEYATVRQRLLDTAW------AGAPWRKLDSRGYSYSYLF 1123

The following BLAST results are available for this feature:

BLAST of mRNA_D-dichotoma_M_contig1002.115.1 vs. uniprot

BLAST of mRNA_D-dichotoma_M_contig1002.115.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G859_ECTSI	8.050e-81	31.83	Methyltransf_11 domain-containing protein n=2 Tax=...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007052	CS domain	PFAM	PF04969	CS	coord: 75..139 e-value: 1.4E-5 score: 26.0
IPR007052	CS domain	PROSITE	PS51203	CS	coord: 55..154 score: 9.346
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 68..165 e-value: 1.8E-13 score: 52.4
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 72..159
IPR019193	Ubiquitin-conjugating enzyme E2-binding protein	PFAM	PF09814	HECT_2	coord: 338..585 e-value: 3.1E-9 score: 36.2
IPR037898	NudC family	PANTHER	PTHR12356	NUCLEAR MOVEMENT PROTEIN NUDC	coord: 75..161
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 564..678
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..539
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 540..563
None	No IPR available	TMHMM	TMhelix		coord: 540..562

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-dichotoma_M_contig1002	contig	D-dichotoma_M_contig1002:182604..185279 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Dictyota dichotoma ODC1387m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_D-dichotoma_M_contig1002.115.1	mRNA_D-dichotoma_M_contig1002.115.1	Dictyota dichotoma ODC1387m male	mRNA	D-dichotoma_M_contig1002 181354..191570 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_D-dichotoma_M_contig1002.115.1 ID=prot_D-dichotoma_M_contig1002.115.1|Name=mRNA_D-dichotoma_M_contig1002.115.1|organism=Dictyota dichotoma ODC1387m male|type=polypeptide|length=679bp
MVESSRGPPEQALGVGHAGRARESSLQANLERIAGQGLGLRGHAGETAVS
DRGSGGSVKLPWGADDLHCSHDEEYLNVELKVEAELKATDFLVEIGATRV
KICFRPKRGALQTVLDEELEHRIDVSESTWSIQDRRVLVLSLCKRAGDVW
RQCFRSQEQGAMKVSGEKGVVGDAVFPTHRATPALASLGTQCPPARQSSD
DSVGVALASFVPPDHLLIEQQSGVGIFQVYMSKPLGWQVTQARVIRSSTG
ECDVRYACRSKLSAIEVNRGDRQPELAFGTCLRLGRDDFQTDAASWKSGS
SSGLVAFRIPFGPTCGKIHDSLDGSANDVDGDFDVRRVARLRCRQCSNIL
TPPGRGLTMRALPSGRWDDCIEDMICFEGPSAVPMLAREVAFARSGLCLL
GSAEVLIHPDDLIVDEVVLEEDGEPSECPRCFSLGRPVRCRRCGSPLGRL
APLVPGQQQAINGGPSIESRGVLLLKHTLLGDNVTDMDSHGAGDGACRSD
GGLLRSAGPAIDPVFASVTSVQWLMEEIEHELLVNRHRRFTLVIGGCLVS
PSAACLGLIVMATHTRVSEDTRKEPRRAFRVAFREKLWGEDAEADLFVED
ARPPGLQQGRDQGEKSEPGGAGLMENDKKKPKLLILAKSDYDEVRRKLVG
ASWTSIDGSAESAGNRFSSRGFLFSYMF*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007052	CS_dom
IPR008978	HSP20-like_chaperone
IPR019193	UBQ-conj_enz_E2-bd_prot
IPR037898	NudC_fam